Crotalus tigris (Tiger rattlesnake): 120307110
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Entry
120307110 CDS
T08476
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04110
Cell cycle
ctig04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120307110 (SMC1B)
04114 Oocyte meiosis
120307110 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120307110 (SMC1B)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120307110 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
120307110 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Phage_coat
Motif
Other DBs
NCBI-GeneID:
120307110
NCBI-ProteinID:
XP_039197336
LinkDB
All DBs
Position
Unknown
AA seq
1236 aa
AA seq
DB search
MGYLKLLLIENFKSWRGQQCIGPFKKFTCIIGPNGSGKSNVMDALSFVMGEKTSNLRVKH
IQELIHGAHVGKPVSSSGSVTMVYVEENGEEKRFSRIIRGSGSEFLVNGTAVNRSMYTKA
LVEIGIIARAKNCLVFQGEVEAIAMKKPKERTQLFEQISNSGELAAEYAEKKRDLQKAEE
DAQFSYNKKKNVAAERKRAKLEKEEAEHYQELFEELAEHKKQLQLFRLYHNEQKIKFLNN
KVAEKTRIIGTKKMAVSHAEETMKAKKSAFGMLTRSNQQIEKEIRALEIILNQKRPQYIK
AKEKTSHQIKKVDMAKKKLRDHMKEQAKQEEGKRELELELTEIDKAWRAFEKKVEEEAQH
REREVLLEESQVNQYQELKELVHKKVAILTQQREKLLWEQKADMEKMSFDKRRQKETEEN
IKHIMEQIEDNEKRMEKLVEYIRTCSESLEEKKQQEEMLTNEIQTSKIRIAKINEELSKV
VSDLQNAKIDVHEGKRQQKRAENLESLKRLYPDFVFGRLVDLCHPIHKKYQLAVTKVFGK
YMTAIVVATEKTARNCIRFLKEERAEPETFLPLDYLEVEPINEQLREIRGSKLIIDVIQT
SFPPLKKVIQFVCGNGLVCETIKEAKQLAFDGQHRLKTVALDGTLFLKSGIISGGSSYLK
LKARYWEEKEINELKERREKLMDELKILLKIKHKEADLRHLQAQCQGIQTRYKYSQNELE
ILKKKRLANFYKEKSMLESELVNIQSQYTMLNEGVLQRTEKTNELKKKINEVEDNVFHEF
CEEIGVENIRVYEKEHIQKQEEVDRKRSEFENQKTRLNTQLEFINSLIEKMVKKNRVLKE
DIHKEEAEIIQLKKDEENFLQMVNEVMEELQQLRKKQNISKSDVAKAQNEVEESRKALLT
LNRELATLQKEAGAIETSLEQKKLEKHNRLLDCKLQDLGINLLLGSLDDISEIELEPDTE
STEVTADIYEREEALQIDYSSIRKQLKELQSDKEIETHLEQLQQEVAREENVLLKTTAPN
LKALEKLHIITGRFQESVNVFEVHRKEARLCRQEFEKVKKKRYERFSQCFEHVSVAIDQI
YKKLSRNSSAQAFLSPENPEEPYLGGIGYNCVAPGKRFMPMDNLSGGEKSVAALALVFAM
HSFRPAPFFVLDEVDAALDNTNIGKVSNFIRQQSEENFQIIVISLKEEFYSKADVLIGVC
PKQDDFMFSQILILDLARYSDSEENERHKRKKSSVL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgggatacttaaaacttttgctgattgagaatttcaaatcctggcggggacaacagtgc
attgggccgttcaagaaattcacttgtatcattggtcctaatggctcagggaaatcaaat
gtaatggatgcccttagctttgtaatgggtgaaaagacatctaatttaagagtgaagcac
attcaggaactgatacatggagcacatgttggaaagccagtttcttcaagtggaagtgta
acaatggtgtatgtagaagaaaatggggaagagaaaagattttcaaggattattcgaggc
agtggatctgagtttcttgttaatggtactgctgttaaccgatctatgtatacaaaggca
cttgtggaaattggcataattgcaagagcaaagaattgtctagtttttcagggtgaagtt
gaagcaattgcaatgaagaaacccaaagaaagaactcaactttttgaacaaattagtaac
tcaggagagcttgctgctgaatatgcagaaaagaagagagatttgcaaaaggcagaggaa
gatgcacagttcagttacaacaagaagaaaaacgttgcagctgagcgcaaacgtgcaaaa
ttagaaaaagaggaggcagaacattatcaagagttgtttgaagaactggcagaacataaa
aagcagttgcaacttttccgattgtatcacaatgagcaaaaaattaaatttcttaataat
aaagtggctgaaaaaaccaggattatcggcactaagaaaatggctgtttctcatgcagaa
gaaaccatgaaagccaagaaatctgcttttgggatgctaactagaagcaatcagcagatt
gaaaaagaaattagagctctagaaattatactgaatcaaaagagacctcagtatattaaa
gcaaaggaaaaaacctctcaccaaattaaaaaagtagatatggctaaaaaaaaattaaga
gaccatatgaaagagcaagctaagcaagaagaaggcaaaagggaattggagctagagctg
actgagattgataaagcttggagagcatttgaaaaaaaggtcgaagaagaggcacaacat
cgagaaagagaagttttgctggaggaaagtcaggtaaatcagtatcaggaattgaaagaa
ttagttcataaaaaagtagccatattaactcagcaacgggaaaaactgttatgggagcag
aaagcggatatggaaaagatgtcatttgataagcggagacaaaaagaaactgaggaaaat
ataaagcatatcatggaacagatagaagataatgaaaaaaggatggagaagcttgtggaa
tacattaggacatgctcggaatctttagaagaaaaaaagcaacaagaagaaatgctgaca
aatgagattcaaacttcaaagataagaatagccaaaataaatgaagaactaagtaaagtt
gttagtgatttgcagaatgctaaaattgatgtccatgaagggaaacgccagcagaagagg
gcagaaaatttggagagcctcaaaagattatatcctgattttgtgtttggaagacttgtg
gacttgtgtcaccccatccataaaaaataccaacttgctgtcaccaaagtttttggcaaa
tacatgactgcaattgttgtggccacagaaaagacagctagaaattgcattcgtttcctc
aaggaagaaagagctgagccagaaacattccttcctttggattaccttgaagttgaacca
atcaatgaacaattaagagaaataagaggttcaaaactgataatcgatgtcatacaaaca
tcttttcctccattgaagaaagttattcagtttgtctgtggaaatggccttgtctgtgaa
acaataaaggaagcaaaacagttagcatttgatggccaacatcgactgaaaacagtggct
cttgatggaactttatttttgaaatctggaataatttctgggggctcaagttatttgaaa
ttgaaggctagatactgggaagaaaaagaaataaatgaactaaaggaacgaagggagaaa
ctaatggatgaactaaagatcttactaaaaattaaacacaaggaggctgatttaaggcat
ttacaagctcagtgccaaggaattcaaacccgatacaaatattcacaaaatgaactagag
attcttaagaaaaaacgtctggctaatttctacaaggaaaaatctatgctggaaagtgaa
ctggtcaatatacagtcacaatataccatgctgaatgaaggagttttacaaagaactgaa
aaaacgaatgagctcaaaaaaaaaattaatgaggtggaagacaatgtttttcatgaattc
tgtgaagaaattggtgtggagaacattcgtgtatatgaaaaagaacatatacaaaagcaa
gaagaagttgacaggaagagatctgaatttgaaaaccagaagacaagactgaatacacaa
cttgagtttattaatagtcttatagaaaagatggtgaagaaaaatcgtgtgctaaaggag
gacattcacaaagaagaagctgaaataattcaactgaaaaaggatgaagaaaacttttta
caaatggtaaatgaagtcatggaagaattacagcagcttaggaaaaagcagaatattagt
aaaagcgatgttgcaaaagcacagaatgaagttgaagaatcaaggaaggcattattaact
ttaaatagagagttagcaacattacaaaaggaagcaggggctattgagacctctctggaa
cagaagaaattagaaaagcataataggcttcttgattgtaagctgcaagatctaggaata
aaccttcttttgggatctctggatgacattagtgaaattgagctggaacctgatactgaa
agcacagaagtcactgcagacatctatgaaagagaggaggcgcttcagatagactatagc
agtattagaaaacagttaaaggaattgcagtctgacaaagagattgagactcacttagaa
caacttcagcaagaagtggcacgtgaagaaaatgttttgttaaaaacaacagcaccaaat
ctcaaagcactggagaagcttcatattattacaggcagatttcaagaatctgtcaatgtg
tttgaagtccataggaaggaagccagattatgtaggcaagaatttgaaaaagtgaaaaaa
aagagatacgagaggttcagccagtgttttgagcatgtgtcagtcgctattgatcagatc
tacaagaaacttagtagaaacagcagtgctcaggcctttcttagtccggagaatcctgaa
gaaccttacttgggaggtatcggctataactgtgtagctcctgggaaacgatttatgcca
atggacaacctctcaggtggagaaaagtctgttgcagctctggctcttgtgtttgcaatg
cacagttttaggcctgctcccttttttgttttagatgaagttgatgcagctctagataac
acaaacattggaaaagtatcaaactttattaggcagcaatcagaagaaaactttcagatt
atagttatttctttgaaggaggaattctattctaaagcagatgttttaattggagtctgc
cctaaacaagatgactttatgtttagtcagatactgatcctggatcttgctcgatattca
gactctgaggagaatgaaagacacaaaaggaagaagagctctgtgctttaa
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