Crotalus tigris (Tiger rattlesnake): 120307295
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Entry
120307295 CDS
T08476
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120307295 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ctig01007
]
120307295 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctig03016
]
120307295 (VARS2)
Enzymes [BR:
ctig01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
120307295 (VARS2)
Amino acid related enzymes [BR:
ctig01007
]
Aminoacyl-tRNA synthetase
Class I (U)
120307295 (VARS2)
Transfer RNA biogenesis [BR:
ctig03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120307295 (VARS2)
Prokaryotic type
120307295 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
120307295
NCBI-ProteinID:
XP_039197826
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MPSAHLNSASHRNMSVLCRLLLRAEKRHWDEFGGWRRGYSQGSKTDLNKQVGKMDHLKNK
EQRQKRLWKKMEAIEAQMAAGSKETSNQGKILSSKNIAEYDIPTIVGQKKDTSAPLPASY
SPRYVEAAWYPWWVKEGFFKPEFQQHLPHRKPETFSISLPPPNVTGSLHLGHALTVAIED
ALVRWRRMQGYRVLWLPGSDHAGIATQAVVEKKIWKEQGVLHQDLSRDEFLQEVWKWIEE
KGNEIFQQLKEMGASLDWDRACFTMDSRFSQAVKEAFVQLHEQGLIYRDKRLVNWSCALQ
SAISDIEVENRQIEGRTKLSVPGLEDKVLFGVLETFAYKVEGEESMEVPISTTRPETMFG
DVAVAIHPDDSRYLHLHGKRVCHPFTGRLLPIVTDPAVELQMGTGAVKVTPAHNHADYKL
AQRHNLPLVSVIADDGTMTAECGEWVQGLHRFLAREKVLAALKEKGLYRGAKDHCLVLPV
CSRSGDVIEILLKNQWFVRCEAIAQSALEAVESGSLKLTPQFYKKNWRTWLLNINDWCIS
RQLWWGHQIPAYQVMLPGSPDLEEQRESNGLWVVGRTEAEARRKAAGMLGKSEQQLELVK
DADVLDTWFSSSLFPFAALGWPQKTEDLQQFFPNNLLETGSDLLFFWVARMVMLGKQLTG
ELPFSQVFLHSLIHDAHGRKMSKSLGNVIDPLDVVHGASLQVLQQKLKDSNLSPREIVIG
SEGLLQNFPQGIAESGSDALRFALCRYDAHGTSINLNMAAMEKASHFCNKVWNALKFTLA
ALGEEFAPLDPEQVFPSFPMEQWILSRLYHTAEYCAQHFEEYKLHSVANAVYLFWLQDFC
STYLDSVKPTLRSGDPACLLSTRQILYNCVDLALRLLSPFMPFLTEELWQRLPKTELETS
PSICVARYPSPEHLRHWSNPEEEANFSLVQEIIQVIRSTRATYQLTKARPTVYLACSETA
PWATYEKYQEPLQTLSLAGSVHLLPNSEEIELPLNCLAVKVNGHTSLYMDLQDLVDPHKE
LLKLTSRQQKLKQRLANLTEKLQKQNSLKAKLNHEQKISLLRSELEHTEQMFATFQKMAE
HQNAQLT
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcccatcttaattctgcttcccatcggaatatgtctgttctttgccgtctg
cttctccgggcagagaagaggcactgggatgaatttggtggatggaggaggggttattcc
caaggaagtaagactgatcttaataagcaagtggggaagatggatcatctaaaaaataag
gaacaaagacaaaaacggctgtggaaaaagatggaggctattgaagctcagatggctgct
ggatccaaggaaacttcaaatcaaggcaagatcctttcctcaaaaaacattgcagaatat
gacatcccaactatagttggacagaaaaaagatacctcagcacctttgcccgcctcctac
agtccacgctatgttgaagctgcctggtatccttggtgggtgaaagaaggtttctttaaa
ccagaattccagcaacacctgccccataggaagccagaaacattttctatctctctccca
ccacctaatgtcacaggatcccttcacctggggcatgccttgacggtagctatcgaagat
gctttggtacgatggagacgaatgcaaggctatcgagttctctggcttccaggttctgat
catgctgggattgcaactcaggctgtggtagaaaaaaagatctggaaagaacagggagtt
ttgcaccaggatctctcacgggatgaatttctccaagaagtttggaagtggatcgaggag
aaagggaatgaaatattccaacagctgaaagagatgggagcatctttggactgggacaga
gcctgctttactatggattcacgtttctctcaagccgtgaaagaggcttttgtgcaactt
cacgaacaaggcctgatatatcgagacaagcgcctggtgaactggtcttgtgccttgcag
tcggccatttctgacatcgaggtggagaatagacagatagaaggacggacaaagctctct
gtgcctggacttgaggacaaagtgctgtttggggtattggagacgtttgcctacaaagtc
gaaggagaggaaagcatggaagttcctatatctactactcgccctgagacaatgtttggc
gatgtggctgttgccattcaccctgatgactcacgctacttgcacttgcacggcaagaga
gtctgccacccgttcaccggacgtctccttcctatcgttacggatccagccgtggagctg
cagatgggcacaggggctgtgaaggtcactccagcacacaaccacgctgactacaaactg
gcccagaggcacaacttgccactcgtttcagttattgcagacgacggcacgatgaccgca
gaatgtggggaatgggtgcagggactgcatcgattcctggctcgagagaaagtgttggct
gctttgaaggagaaagggctctatcggggtgcgaaagaccattgcttagtccttcctgtt
tgcagccgctctggagatgtgattgaaatcctcttgaagaaccagtggtttgtccgatgt
gaagctattgctcaaagcgccttagaggcagtggaatctggatctttgaagctgaccccc
caattttataagaaaaactggagaacctggctcttgaacatcaatgattggtgtatttct
cgacaattgtggtggggccatcagattccagcctatcaggtcatgcttcctgggtcacct
gacctagaagagcagagggagagcaatggattatgggtagtgggcaggacagaagcagaa
gcccggaggaaagcagccggcatgctgggaaaatctgaacagcagctggagctggtgaaa
gatgctgatgtcttggatacttggttctcctccagcctcttcccttttgctgctttgggc
tggccccagaagacagaagacctccagcagttctttcccaacaaccttttggagactggg
agtgatcttctgttcttttgggtcgcccggatggtgatgctgggaaaacagctaactgga
gaactgcctttctctcaggtgttccttcactccttaatccatgatgcccatggcaggaaa
atgagcaagtctcttgggaatgtgattgaccctttggatgttgttcatggggcctctttg
caggtcctacagcagaagctaaaggatagcaatttgagcccacgagagattgtcattggt
tccgaaggcctgctgcaaaattttcctcaaggaattgccgaaagtggttctgatgctcta
aggtttgctctctgccgttatgacgctcacggcaccagtattaatctaaatatggcagcc
atggaaaaagcctctcatttctgcaacaaggtgtggaatgccctaaagttcactttggca
gccttgggagaagaatttgcccctctggatccagagcaggtcttcccaagctttccgatg
gaacagtggatcttgagccgtctctatcacacggcagaatattgtgcccagcactttgag
gagtacaaattgcattctgtggccaatgctgtttatctgttctggctgcaggatttttgc
agcacctatctggactctgtcaagcccaccctgaggagtggagatccagcttgccttttg
tctactcggcagattttgtacaattgcgtagacctggctctgcgcctcctgtcccccttc
atgcctttcctcacggaggagctgtggcagcggcttcccaagacagagctggagacttct
cctagtatctgtgtggccaggtacccaagccccgaacatctgagacattggagtaatcct
gaggaagaggcaaacttctcgttagtgcaggaaattatccaagtgatacgttccacgagg
gcgacttaccagctaaccaaagctcgaccaacagtgtatctggcttgctcagaaacagcc
ccctgggctacctatgagaaatatcaggagccactacagacattgtctttggctggatct
gtgcatcttctccccaattctgaggaaatagagctacctctgaactgcctggctgtgaag
gtcaatggtcacactagcctttacatggatctgcaggatttggtggatcctcacaaagaa
ctcctcaaactgacatctcggcaacagaaattaaagcaacggctggcaaacctcacagaa
aaacttcagaagcaaaactccttaaaagccaaattgaatcatgagcaaaagatttctttg
cttcgttcggagttggagcacacagaacagatgtttgccacttttcagaaaatggctgaa
caccagaatgctcaactgacttag
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