Crotalus tigris (Tiger rattlesnake): 120307303
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Entry
120307303 CDS
T08476
Symbol
FN1
Name
(RefSeq) fibronectin isoform X1
KO
K05717
fibronectin 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04510
Focal adhesion
ctig04512
ECM-receptor interaction
ctig04810
Regulation of actin cytoskeleton
ctig04820
Cytoskeleton in muscle cells
ctig05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120307303 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120307303 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120307303 (FN1)
04810 Regulation of actin cytoskeleton
120307303 (FN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120307303 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120307303 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctig04147
]
120307303 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
ctig00536
]
120307303 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
ctig04990
]
120307303 (FN1)
Membrane trafficking [BR:
ctig04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
120307303 (FN1)
Exosome [BR:
ctig04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
120307303 (FN1)
Glycosaminoglycan binding proteins [BR:
ctig00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120307303 (FN1)
Domain-containing proteins not elsewhere classified [BR:
ctig04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
120307303 (FN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
fn1
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
Fn3_Dep-1_2nd
Interfer-bind
Fn3_Dep-1_4th
FN3_Tor_3rd
Motif
Other DBs
NCBI-GeneID:
120307303
NCBI-ProteinID:
XP_039197844
LinkDB
All DBs
Position
Unknown
AA seq
2471 aa
AA seq
DB search
MPDSRSKRTILLVLTLCSGAGVWGSQPRGEKSKRQTQHIVQPSLPVGQNKQGCYDNGQHY
QINQQWERIYLGNPLVCTCYGGSRGFSCESKPEPEETCFDKYTGTTYRVGETYERPKDSM
IWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWTC
KPVAERCYDNTAGTSYVVGEVWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDQDTKTS
YRIGDTWSKKDNRGNLLQCICTGNGRGEWKCERHSSLQATGVGSASATITDVRTALYQPQ
PQPAPFGHCVTDSGMVYILGMQWLKAQGSQHMLCTCLGNGISCQETAVTQTYGGNSNGEP
CVFPFTYNGRTFYSCTSEGRHDGNLWCSTTSNFDQDKSYSFCTEQNVLIQTRGGNSNGAL
CHFPFLYNNRNYTDCTSEGRRDNMKWCGTTSNYDVDQKFGFCPMAAHEEICTTNEGVMYR
VGDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDVNQTFHKRHEEGH
MLNCTCFGQGRGRWKCDPVDQCQDSESQTFYQIGDSWEKHAHGVRYQCYCYGRGIGEWHC
QPLNTGSPGHPVQVIITDVPIQPDSHPIQWIAPESSHISNYILRWKPKNSGVQWKEAKIP
GYLNSYTISGLKPGVLYEGQLISVQHYGQREITRFEFTTSSTTAISSSRVAGETTALPSV
VSISESVTEITANSFVVSWVSASDTVSGFRVEYELSEDGDEPKYLDLPNTVSSVSIPNLL
PGRSYIIKVYQISEEGEQNLILSTTQTTAPDAPPDHLVENVDDTSILVSWSRPEAPITGY
RIVYTPSVEGSSTELNLPESATSVTLSDLMPGVQYNISIYAVEENQESTPIFIQQKTTGV
PRADEIHPPQQLQFLEVASDKITIMWSPPDSAVIGYRVEVIPVNRPGEHGQRLPTTRYTF
AEVTELLPGTTYIFKIYAIGQNTESEPLTGEQTTKLDGPTNLQLVNETPSTALVTWKPPR
AHIAGYQLTVQPTTGGHPKHYTVGPSATKYLLRNLHSGSEYTVSLVAVKGNQKSNPEMGT
FTTLQSTGSIPPYNTEVTEASIVVTWIPAPRLGFKLGVRPSQGGEAPREVISESGSIVIS
GLTPGVEYIYSINVIKDGQERTTPIVKTVVTPPSPPTNLNLDSNPDTGILTVSWKKSTTP
DITGYRITTVPTNGQESYTLEEQVQAEDTSCIFENLSPGVEYNVSVYTLKDNQESLPISE
TTTQEIPQLTDLSFVDVSDTSIGLKWTPINTSAIIGYRIKVIATGETIPIFEDFVDSSVG
YYMVTGLEPGIDYEISVITLINGGESVPTTLIQQTAVPPPTDLRFTNVGSDTIRVTWTPP
ASIELSSFLVRFSPMKNKEDVAELSISPSDSAVVLTNLLPGTAYLIKVYSVYEQHESKPL
SGEQKTGIDSPTGLDFSEITAHSFTVHWIAPRAPISGYKIRHHPEQGGSRPKEVRVAPSR
NSITLTDLIPGSEYAVSVSAFYGKEESLPLIGQQSTVSDVPRDLHVTATGPTSLVISWDA
PAVTVRYYRITYGETGGSGPVQEFTVPGHVSTATIPGLKPGVDYTITVYAVTGRGDSPAS
SKPVSINYRIEVDTPSQLEVTDVQDNSLTVRWQPSSSQVTGYRVTATPKDGHSPTKTRVL
SAEQTEVTIHELQPTVEYVVSVYAQGPNGESQPLVEKVVTNIDRPKGLAFTAVDVDSIKI
AWESPQGQVTGYRVTYSTPEDGIQELFPASDGEDDTAVLHGLRPGSEYTVYIVALHNDLE
SLPLIGTQTTAIPPPTNLKFIQVAPTSLTLTWTAPNVKLTGYRVRVNPKEKNGPMKEINL
APDSTSAVISGLMVATKYEVSIYALKDSLTSRPTQGVVNTLENVSAPRRARVTDVTERTI
TITWRTKTEAITGFQIDAVPAGGQNPVQRTISPDVRTYTITGLQPGTDYKIYIYALNENA
RSSPAELDAFTAIDAPSNLHFLTTTSNSLLISWQPPRAKITGYIIKYEQVGGPTRELLPR
PHPGITEATITDLEPGTEYIIYITAVKNNQKSEPLSGRKRTDELPRLVTPPHPGKRVTEI
LDVPSVLENVPYLTNNPYDNGNGIPIPGSSGQHSILSNPGQQVIVEEFGSRTPTTPATPG
RAKPSREEQPVVVIRHPIQVPDVDKPSYHHTLLSKDNYTRPQEALSQTTISWTPYTDSSE
YIISCQPVSDEEEPTEIKVPGVYSSATLTGLTRGATYNIIVEAVKNQRRHRVLEEMVTVG
NNVSERLSPPTDDACYDTFTGSFYSIGDEWERMSETGFKLWCQCLGLGSGHFRCDSSKWC
HDNGINYKIGEKWDRHGENGQVMSCTCLGNGKGEFKCDPHEATCYEDGKMYHVGEQWQKE
YLGAICSCTCYGGQQGWRCDNCHRPGASEGSPSQTYSQREQQSTNTQNIHCPIECFYPLH
PHSDAQNRRGD
NT seq
7416 nt
NT seq
+upstream
nt +downstream
nt
atgccggatagccgatcgaagcgaacgattcttttggtattgactctttgttctggagca
ggagtctggggttctcaaccccgcggggaaaaaagtaaaaggcaaacgcagcatatcgtt
cagccctctctgccggtcggccagaacaaacagggatgctatgacaatggacaacattat
cagataaaccagcagtgggaacgcatttacttggggaaccctctagtctgcacttgctat
ggtggcagtcgaggattcagctgtgaaagcaagcctgagccggaagaaacctgttttgat
aaatacactgggactacttaccgagtaggggaaacctatgaacggccaaaggattccatg
atctgggactgtacttgtattggggctgggcgtggaagaatcagctgcactattgcaaat
cgatgtcatgaaggtgggcagtcctacaagattggtgatacctggcgcaggcctcacgag
acaggaggctacatgttagaatgtgtgtgtcttggcaacgggaagggtgaatggacttgc
aagccagttgctgagcggtgctatgataatacagctgggacgtcatacgttgttggagaa
gtttgggaaaagccatatcagggctggatgatggtggattgcacttgccttggagaaggc
agtgggaggattacttgcacttccagaaacagatgcaatgatcaggacaccaagacctct
taccgaattggagacacctggagcaagaaggataatagaggaaatctacttcagtgcatc
tgcacagggaatggcagaggggaatggaaatgtgaaaggcattcctctttgcaagccaca
ggtgtaggaagtgcatctgcaactatcacagatgtacgaactgcactctaccaaccacaa
ccccagcctgctccttttgggcattgtgtaactgatagtggtatggtgtatatcctggga
atgcagtggcttaaggcacagggaagccagcatatgctttgtacttgtctgggcaatgga
atcagctgccaggaaacagctgtgacccagacttatggtggcaattccaatggagagcct
tgcgttttcccattcacatataatggaaggactttttattcatgcacttccgaaggacgt
catgatgggaatctctggtgcagtacaacctccaactttgaccaggataagagctactcc
ttttgtacagagcaaaatgtgttgattcagacacgtggtggaaattccaatggtgccctg
tgtcactttcctttcctttataataatcggaattacactgattgtacttctgaaggacga
agagataacatgaagtggtgtggaactacctcaaactatgatgttgatcagaagtttgga
ttttgtcccatggcagctcatgaagaaatttgtacaacaaatgagggtgttatgtatcgt
gttggagaccaatgggacaaacagcatgatatgggccatatgatgagatgtacttgtgtg
ggaaatggacgtggagaatggacctgcatcgcatattcccagctcagagatcagtgtata
gttgatgggatcacatatgatgttaatcagacttttcataaacgtcacgaagaaggacac
atgctgaactgtacatgctttggccaaggtcgggggagatggaaatgtgatcctgttgac
cagtgtcaagattcagaaagccagaccttttaccagattggggattcatgggagaagcat
gcccatggagtgagatatcagtgctactgttatggccggggtattggagaatggcactgc
cagcctttgaatacaggttcccctggtcatcctgttcaggtgattatcacagacgttcca
attcagcctgattctcatcctatccagtggattgcacccgagtcctctcacatttccaat
tatattcttcgctggaaaccgaaaaattctggagtgcaatggaaagaagctaaaattcca
ggctatttaaattcctacacaatctcaggtctgaaacctggtgtcctttatgagggacaa
cttataagtgtgcagcattatggtcagagagaaatcacccgttttgaattcactacctct
agtacaacagctatttcatctagtcgtgtggcgggagaaacaacagcccttccctctgtc
gtctctatttctgaatctgtcacagaaatcacagctaatagctttgtagtctcttgggtt
tctgcctcagacactgtgtcaggatttcgtgtggaatatgaactgagtgaagatggtgat
gaacctaaatatcttgatcttccaaacacagttagttcggttagcattcctaacttgctt
ccgggtcgtagctacattatcaaagtctatcaaatttcagaggaaggagagcaaaatcta
attctttcaacaacacagacaacagcacctgatgctcctcctgatcatcttgtagaaaat
gttgatgatacgtcaattcttgtcagctggagcagaccagaagctccaatcacaggttac
cggattgtttatactccttcggtggaaggtagcagtacagaactcaatctccctgaatct
gcaacatctgtgacactcagtgacttgatgcctggtgttcagtacaatatcagtatttat
gctgtggaagagaaccaggaaagcactcctattttcattcagcagaaaaccacaggagtg
ccaagggcagatgagattcatcctccacagcaacttcaatttctggaagttgccagtgac
aaaatcaccatcatgtggagcccccctgacagtgcagtgattggctatcgtgtggaggtt
attccagttaaccgtcctggggaacatggtcagagactacccactaccagatatacattt
gctgaggtcaccgaacttttgcctggaacaacatacattttcaagatctacgctatagga
caaaacacagaaagtgaaccattaactggagaacaaacaacaaaacttgatggcccaacc
aatttgcagcttgtcaatgagacaccctctactgcactagtcacatggaagcccccgcga
gctcatattgcaggataccaacttactgtgcagcctaccacaggtggtcatccaaagcat
tacactgtggggccatcagccaccaagtatctgctgaggaatttgcactctggctctgag
tatactgtgtctttagtggctgttaagggtaaccaaaagagcaatccagaaatgggaacc
ttcacaacattgcaatccacaggctcaattcctccctataacactgaagtgacagaggca
tccattgttgttacctggatacctgcacctagacttgggtttaagctaggggtgagacca
agccaaggtggagaagctccaagggaggtcatctcagaatctggaagcattgttatatct
ggcctaactcctggtgtagaatatatctacagcattaatgttattaaggatggtcaagaa
agaacaacacctatcgtcaagacagtagtcacaccaccatctcctcccacaaacttgaac
cttgattctaaccctgacactggaatccttactgtttcttggaaaaaaagcactactcca
gacatcactggatacagaattacaacagtccctacaaatgggcaagaaagctacactctg
gaggagcaagtgcaagcagaagatacatcctgcatttttgaaaatctgagtcctggtgtg
gaatacaatgtcagtgtttacacacttaaagataatcaagaaagtttgcccatctctgaa
accaccacacaagagataccccagcttactgacttaagctttgttgatgtaagtgataca
agcatcggcctaaagtggaccccaataaatacttctgccattattggttaccgcatcaaa
gtaattgccacaggagaaactatccccatatttgaagattttgtggattcttcagtagga
tactacatggttacaggcttggagccaggcattgattatgaaatcagtgtaatcacactc
attaatggtggagagagtgtccctactacgctgattcaacaaacggctgttcctccacca
acggatctccgtttcaccaatgtgggatctgatactataagagtaacctggactccacca
gcatctattgaattgagcagtttcttggttcgcttctcacccatgaagaacaaggaggat
gttgcagaactttccatttcaccttcagacagtgccgtggttttaacaaatctccttcct
ggcacagcatacttgatcaaggtctacagtgtatatgaacaacatgagagtaaacctctg
agtggagagcagaaaacaggtattgattcccccactggactggatttttcagagataaca
gcccattctttcactgtccattggattgccccccgcgcccccatctctggctataaaata
cgccatcaccctgaacaaggtggaagtagacccaaagaagtccgtgttgcaccatctcgc
aactccatcactctcacagatttgattccagggtcagagtatgcggttagtgtatctgcc
ttttatggcaaagaagagagtttgcccttaattggacagcaaagtacagtttctgatgtc
ccaagagatctacatgtgactgctactggtcccactagtctagtcatctcctgggatgca
cctgctgttacagttcgatactacaggatcacatatggagaaacaggtggcagcgggcct
gttcaagagttcactgttcctggtcatgtctccactgctacgattcctggtcttaagcct
ggagtagattataccattactgtgtatgctgtcactgggcgaggggacagtcctgccagc
agcaaacctgtcagcataaattaccgaatagaggttgatacaccatcgcagctagaagtt
actgatgttcaagacaacagccttactgtgcggtggcagccttcttcttcccaagtgact
ggttatagagtgacagctacccccaaggatggccatagccccacaaaaactagagttctt
tctgcagaacaaacagaagtcacaattcatgaactacaacctacagttgagtatgtggtt
agcgtctatgcccaagggccaaatggagaaagccagcctttggttgagaaagttgttaca
aacattgaccgtcctaaaggactggcattcactgcagtggatgttgattccatcaaaatt
gcttgggaaagcccacaggggcaagtcaccggatacagggtgacctactcaacccctgag
gatggaatccaggaattattccctgcttcagatggtgaagacgacactgcggtgctgcat
ggcctcaggccgggttctgagtatactgtttacattgttgccttgcacaatgacttggaa
agtctacctttgattgggacccagaccacagcaatcccacctcctacaaatctgaaattt
attcaggttgctccaacaagtctcacactaacttggactgcaccaaatgtgaagcttact
ggatatcgagtgagagtaaatcccaaggaaaagaatggcccaatgaaagaaattaatctt
gctccagatagcacatctgctgttatctctggactaatggtggcaactaaatatgaagtt
agtatctatgcactgaaggactctttgaccagcagacctacccaaggtgtagttaatact
ctggaaaatgttagtgctccccgtagggctcgtgtcacagatgtcacagagcgaaccatc
acaattacctggcgcaccaagacagaggcaatcacaggtttccagatagatgccgtcccc
gcaggtggtcagaatccagttcaaagaacaattagtcctgatgttagaacctacaccatt
actggcttgcaacctggcactgactacaagatttatatctatgcgctgaatgagaatgct
cgcagctccccagcagaacttgatgctttcactgccattgatgcaccatccaatttgcac
ttcctcacaactacaagcaactccttgttgatcagttggcagccaccacgggccaagatc
acaggctacataatcaaatatgagcaagttggtggcccaaccagggagctacttcctcgt
cctcatcctggtattactgaggccactatcacagatctggagccagggacagaatatatc
atttatataactgctgtgaagaataatcagaagagtgaaccattgagtggaaggaaaaga
acagatgagctaccccggctggtaactccaccgcatcctggtaaaagggtgacagagatc
ttggatgtgccttctgttctggagaatgtaccttacctcacaaacaacccctatgacaat
ggaaatggtatcccaattccaggttcttctggtcagcactccatcctgagcaacccaggt
caacaagtcattgtagaggaatttgggtctcgaacccccacaactccagcaactccagga
agggctaaaccaagtagggaagaacagccagtggtggtgatccgtcatcccattcaagtt
cctgatgttgacaaaccctcttatcatcatacccttctatccaaggataattacacaagg
ccccaggaagcactttctcagacaactatctcatggacaccatatacagatagctctgaa
tacattatttcttgccagcctgttagtgatgaagaagaacctactgagatcaaagttcct
ggtgtatattctagtgctactcttacgggtcttactagaggggcaacctacaacatcata
gtagaagcagttaaaaatcagagaagacacagagttcttgaagagatggtcacagtgggc
aataatgtttctgaaagattaagcccacccactgatgatgcgtgttatgataccttcact
ggttctttctattccattggggatgaatgggaaaggatgtctgaaacgggattcaaattg
tggtgccagtgtttaggccttggtagtggacatttcagatgtgattcttcaaagtggtgt
catgacaatgggataaactataaaatcggtgagaaatgggataggcatggagaaaacggc
caagtgatgagctgcacttgccttggaaatggaaaaggagaattcaagtgtgaccctcat
gaagcaacttgttatgaggatggcaagatgtatcatgtaggagagcagtggcagaaagaa
tatcttggggccatctgctcatgtacttgctacggaggacaacagggctggcgttgtgac
aattgccatagacctggtgcatctgaaggttctcctagtcaaacctattcacagagagag
caacaaagcacaaacactcagaatatccattgtccaattgaatgcttctatcccttacat
ccacactcagatgcacagaaccgacgtggagattaa
DBGET
integrated database retrieval system
