Crotalus tigris (Tiger rattlesnake): 120307569
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Entry
120307569 CDS
T08476
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctig03041
]
120307569 (DDX27)
03009 Ribosome biogenesis [BR:
ctig03009
]
120307569 (DDX27)
Enzymes [BR:
ctig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120307569 (DDX27)
Spliceosome [BR:
ctig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120307569 (DDX27)
Ribosome biogenesis [BR:
ctig03009
]
Eukaryotic type
Pre-60S particles
Helicases
120307569 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
AAA_22
Utp25_C
PRK
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120307569
NCBI-ProteinID:
XP_039198374
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MEAGTGAKRSLEEQERTDSESEEEPAAAAVRGDFAAGFAFSEKEAAAGPGGGAWAEALGQ
LKRKRCATSLDEKIATVRRQRRAQEKATKEGAASRECGGATGENEAKAGGDSEEEEEEEL
QSEPSSADESVFAKADMLKLKERWKQKHGEKEETTQFFQEDASQYDDSLSFQDMNLSRPL
LKAITALGFKQPTPIQKACIPVGLLGKDLCACAATGTGKTAAFILPVLERLIYKPRQAPV
SRVLVLVPTRELGIQVHSVTKQLAQFSSITVCLAVGGLDLKTQEAALRSGPDILIATPGR
LIDHLHNCPSFHLGSIEVLILDEADRMLDEYFEEQMKEIIRMCARHRQTMLFSATMTDEV
KDLASVSLKNPVRIFVNSNTEVAPFLRQEFVRIRPSREGDREAIVAALLTRTFPDHVMLF
IQTKKQAHRLHILLGLMGLRVGELHGNLSQAQRLEALRQFKDEQIDVLVATDVAARGLDI
EGVKTVINFTMPNTTKHYVHRVGRTARAGRVGRSVSLVGEEERKMLKEIVKAAKAPVKAR
ILPQDVILRFREKIEKLEPDVYAVLRLEREERALQCSEAQINTAKRRLEAGSQPAGAGGT
PRSWFQSQEERKNEKLAKALQEFDFALRGKKKRTKFVRDSQKKAQPTPEERSQFEILKAQ
MYAERLAKRSRRPKRARAMPEETPPTEMEAGPKKQCKKKTSAFDVELTNTNEKALKQYRA
GPSFEDRQRLGLQGRRKGGKFKTKSRYRRK
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggaggccggtaccggagccaaacggagcctggaggagcaggagcggacggactcggag
tcagaggaggaaccggcggcggcggcggtccgaggagacttcgcagcgggcttcgcgttc
tctgagaaggaagcggcggcagggccgggcggcggggcctgggcggaggcgctggggcag
ctgaagcgcaagcgctgcgccaccagcttggacgagaaaatcgcgacggtgcggaggcag
cgccgagctcaggagaaggcgaccaaagaaggagcggcaagcagagagtgtggaggggcc
accggggaaaatgaggcaaaggccgggggagacagcgaggaggaagaggaagaggagctg
cagtcggagccttcctcggccgacgagagcgtcttcgccaaagctgatatgctaaagctg
aaggagcggtggaaacagaaacatggtgaaaaggaggaaaccacacagttctttcaggaa
gacgcttcgcagtatgatgatagtttgtccttccaagatatgaacctctctcggcccttg
ctgaaggctataactgctctgggcttcaagcagcctaccccgatccagaaggcctgcatc
cctgtaggactgttggggaaggacttgtgtgcgtgtgcagccacaggaacaggaaagact
gcggccttcatccttcctgtcctggagcgcctgatctacaaacctcggcaggcccccgtc
agtcgggtgttagtgctggtgccaactcgggagctgggcatccaggtgcattccgttaca
aagcagctggctcagttcagcagcatcaccgtgtgcctggcagtgggtggcttggacctc
aagacccaggaggcagccctgcgctctggccctgacattctcatcgccactcctggccgc
ctcattgaccatctgcacaactgtccctccttccacctgggcagcattgaggtcctcatt
ctggatgaagccgaccggatgctggatgaatattttgaggagcagatgaaggagatcatt
cggatgtgcgctcgacaccgccagaccatgctcttctctgccaccatgacggacgaggtc
aaggatttggcttcggtttctttgaaaaaccccgtccggatctttgtgaacagcaacaca
gaggtggccccctttctgcgccaggagttcgtccgcatccggcccagccgcgagggggac
agggaggccattgtggcagctctgctgacccggaccttccctgaccacgtgatgctcttc
atccagaccaagaaacaggcccaccgcctgcacatcctcctgggcctgatgggcctgcgt
gtcggggagctgcacggcaacctttcccaggcccagcgcttggaggctctccggcagttc
aaggacgagcagatcgacgtcctggtggccaccgatgttgccgcccgaggccttgacatt
gaaggcgtcaagacagtgatcaacttcaccatgcccaacaccaccaagcactatgtccac
cgggtggggcgcacagctcgggcggggcgcgtgggccgctccgtgtccttagtgggcgag
gaagagcgcaagatgctgaaggagatcgtcaaggctgccaaggcccccgtgaaggccagg
atcctcccccaggatgtgattctgcgcttccgggagaaaattgagaagctggagccagat
gtgtacgctgtgctgcgcctggagcgggaagagcgggcgctgcagtgctcggaggcccag
atcaacactgccaagcggaggttggaagccggttcccagccagcaggggctgggggcact
ccccgcagctggttccagagccaggaggagaggaagaacgagaagctcgccaaggccctg
caggagtttgactttgcgcttcgaggcaagaagaagagaaccaagtttgtgagggattcc
cagaagaaggctcagcctacgcctgaggaacgttcccagtttgagatcttgaaggcccag
atgtatgccgagcgactagccaaaaggagccgccggcccaagcgagcccgggccatgccg
gaggaaacgccgccgacagaaatggaggctgggcccaagaagcagtgcaagaagaaaact
tcggcatttgacgtggagctcaccaacacgaacgagaaagccctcaagcagtatcgagca
gggccttcctttgaagaccgccagcgtctgggccttcaggggagaaggaaaggaggaaaa
tttaaaaccaagtccaggtacaggcggaagtga
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integrated database retrieval system
