Crotalus tigris (Tiger rattlesnake): 120307611
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Entry
120307611 CDS
T08476
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120307611 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120307611 (TTC37)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
120307611 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_14
TPR_12
TPR_17
TPR_8
TPR_CcmH_CycH
TPR_11
TPR_9
ANAPC3
TPR_15
BTAD
ARM_TT21_C
Fis1_TPR_C
TPR_5
TPR_30
TPR_20
Motif
Other DBs
NCBI-GeneID:
120307611
NCBI-ProteinID:
XP_039198455
LinkDB
All DBs
Position
Unknown
AA seq
1563 aa
AA seq
DB search
MSNKEVKAALKSARDAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELEQPEQAQ
GAYKKAAELDPGQLLAWQGLANLYEKRNHTDVKEDWIKVYEKLLELYENNDQQKWCEVCK
KLVELYHKDKQYLQVARSWHKLIKIRREGGADNVELHQLWKKLVQLLEEGIQLKDNEIEQ
LFLDAFEEAINSSEPVPGEEHKKLYREFLQSLSKFPHESSRMKKACKEMMIVYPNMSYPL
EVLCLHFIQSDNLTEEALGCCQKLLDIDSRSGPALIILGIQSLQERNYNEAEKKLIEGLQ
QSNQCPVGWCYLGKVQMKMHKYQEAVHSCNQALKSLGQLNDSSFIQQQKNIAQHFRARAF
IKIPGANYADEAISSLSQILDRNNDPKLIALRGQAYLKKDLTDEALKIAQELQLAHPDLA
EAHFLEGLIHYRQKEYHQAEMSFQRAIAKEAEIAEFHFWLGLTYWFMNEETRKDKSKALT
QFLKAAKLDNFMGDAFHYLGQYYRDVAGDKNRALGCYKKAFERDKTDGVTGAAVVDLSTE
LGDLETALAILTEVTEQANAGRAKWAWLRRGLYYLKVGQHSQAVADLQAALRADPKDPNC
WEALGEAYLSRGGYTTALKSFRKARELNPKSIYSIYKAAAIEQILGKYKEAIAEYQHILE
KSKDYVLALKGLGECYLMMAKSALANYLDGKALDYVEQSLDFLARAAKYRPEVSCLWKLL
GDACNCVCVISPSKVNVKVSGFLIGQNMEKCVLQKNDLLSLGGRCYGRGLKLMSSPNTWC
DLGINYYNQVQHLAATDSNSNKNEISELLERSIQCLKKAVRLDSKNHLYWNALGVVACCK
GVGNYALAQHAFIKSIQTDQINVIAWTNLGVLYLTSGKIEQAHEAFKVAQSLEPSHLTCW
IGQALVAETVGSYETMDLFRHTTELSMHTEGAKGYAYWVCSTLQDKTNRNTELYKYNILQ
MNAIPTAQVALTKYTERIQNDACAFTMLGYLNEYLQLKKQAADTYQRAVLLLTNSDDRER
YNIVMRNYGRSLCALGLCDDAIKAYLATHLIEFDDIVGIALSYFKKGHFHESQKAYEKAL
AIAESEQDKAYILTSLAIIEYKQNRVDAAKTLLFKCSILQEPNMESLQALCSLGLIKQDA
TLATAALKELLKHTGKKENVYKRFLLASAVYALQGRHLAVQRQVSKAVHSNPDNSALWSL
LSRLVPRYVPQNAKGGAVAGSIACILDLNNGKKALLNTAVNQLATGCHKAENKKNILKAI
HLSPDDPTAWAVLLAACHAENTTVHLHNKQPKQTHLEKMIVSAISAKTKEKDLPASRAQE
IEEWSLFQAITGLNEAGRTSEAEALCEKGLKEFPEQPMWYLLLRQVQCKPLLQSRKELPD
AILEELRKAVLSNSTLITGWHWLAQVYQSQGMMVAAEMCYRKSLKLASQQGNLSGKLSSL
LRLAKLALEICMANVSNDHWPSLVQEATTEAMKISFCPLGILFQALMQYNRKMGSRETRR
MLERVVYQSGFPETVVSVARWYLLRHLYAKNDYELIDALTANAKANGDIRVLELDKKLSA
ADS
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacaaggaagtgaaagcagcattgaaaagtgccagagatgcaataagaaataag
gagtataaagaagcactgaaacattgcaaggcagtattgaaacaagaaaaaaataattac
aatgcttgggtattcattggcctggcggctgctgaattagaacaacctgaacaagcccaa
ggtgcatataagaaggctgctgaacttgatcctgggcagttgctggcatggcagggattg
gcaaatttgtatgaaaaaaggaatcatacagatgtcaaagaagactggattaaagtttac
gagaaactactagaactctatgaaaacaatgatcaacagaaatggtgtgaagtatgtaaa
aagcttgtggagctgtatcataaagataaacaatatcttcaggtggcacgaagttggcac
aaactaataaaaataagaagagaaggaggtgcagacaatgttgaacttcatcagctttgg
aagaaattggtccagttgctagaagagggcatacagcttaaagataatgaaatagagcaa
ttgttccttgatgcgtttgaagaggcaatcaattcttcagaaccagttccaggtgaagag
cacaaaaagctttacagagaattccttcagagtttatcaaaatttcctcatgagtcttct
agaatgaagaaggcctgtaaagaaatgatgattgtctatcctaacatgagttatcccctg
gaagttctttgcttacacttcattcagtcagataacttgactgaggaggccctaggttgt
tgtcagaaacttttggatattgattcaagaagtggtccagctctgatcattttagggatt
cagtctctccaagaaagaaattacaatgaggctgaaaaaaagcttatagaaggtttgcag
cagtccaatcagtgtccagtaggatggtgttacttagggaaggtgcaaatgaaaatgcat
aaataccaagaagctgttcattcctgtaatcaagctttaaagagtctgggacaacttaat
gactcaagtttcattcagcaacaaaaaaatattgcccaacatttcagagcaagagccttc
attaaaattccaggtgctaactatgctgatgaagccatatcttccctcagtcagatcttg
gatagaaataatgatccaaagcttatagctcttagaggacaggcttatctaaagaaagat
ctcactgatgaagctttgaagattgcacaagagcttcagttggcacatccagacctggca
gaagcccacttccttgaaggattgatacattataggcaaaaggaatatcatcaggcagaa
atgagttttcagagagctatagcaaaagaagctgaaatagctgaattccatttttggctg
ggcctcacttactggtttatgaatgaggagacaagaaaagataaatcaaaagccctcact
caatttctgaaggcagcaaaactggacaatttcatgggagatgctttccattatttaggt
caatattacagagatgtagctggagataaaaacagagctcttggctgctataaaaaggct
tttgaaagagataaaacagatggtgttactggagcagcagtagtggacttgagcactgag
cttggagacttggaaactgcccttgccatcttgacagaggtaacagaacaagcaaatgct
gggagagcaaaatgggcctggcttcgccgaggactttattatctaaaagtgggacaacat
tcgcaagccgtggcagatttgcaggcagctctgcgagcagatccaaaggaccccaattgt
tgggaagctctaggagaggcctatctgagtcgaggaggctacacaacagccctgaagtca
ttccgaaaggcaagagaactcaatcccaagtctatatatagtatttataaggctgctgca
attgagcaaattcttggaaaatataaagaggctattgcagaatatcagcatattttggag
aaatcaaaagattatgtccttgcactgaaaggcttgggagagtgttatctcatgatggca
aagtctgctcttgctaactatctggatgggaaagctttggactatgtagaacaatcactt
gattttttggcacgggcagcaaaatatcgtccagaagtatcctgcctttggaagttgctt
ggagatgcctgtaattgtgtatgtgttatttcaccatccaaagtgaatgtaaaagtttca
ggtttccttattggccagaacatggaaaaatgtgtgctccaaaaaaatgatctgctcagt
cttgggggaagatgttatggtcgaggactgaaactgatgtcttcaccaaatacatggtgt
gatcttggaataaattattataatcaagtgcagcatcttgcagccacggacagtaacagt
aacaaaaatgaaatcagtgaacttttagagagatccatacagtgcctgaaaaaagcagtg
cgtttagacagtaaaaatcatctctactggaatgcccttggtgtggtagcctgttgcaaa
ggtgttggaaattacgcccttgctcaacatgcattcattaaatctattcaaactgatcaa
attaacgtgattgcctggaccaatctgggagttttgtatttaacaagtggaaaaatagag
caagcacatgaagctttcaaagtagcccagtctctggaaccttctcatctaacctgttgg
attggacaggcccttgttgcagaaactgttggcagctatgaaacaatggatctcttcaga
cacaccactgaactcagcatgcatacggaaggtgcaaaaggctatgcctattgggtgtgc
tcaaccttgcaagataaaaccaacagaaatactgaactatataagtacaacatccttcag
atgaacgctattccaacagcacaagttgctttaaccaaatatacagaaagaatccaaaat
gatgcatgtgctttcacaatgcttggttatttgaatgaatatcttcagctgaaaaaacag
gcagcagatacatatcaaagagcagtcctattgctgacaaattctgatgatagagaaaga
tataatatagtgatgagaaattatggaagatcactctgtgctcttggcctttgtgatgat
gccatcaaagcttatttggcaactcatctgatagaatttgatgatattgtaggcattgct
ctgtcttacttcaagaaaggacatttccatgaaagtcagaaggcttatgagaaagcactt
gcaattgcagagtctgagcaagataaagcatatatattaacatccctcgcaataatagaa
tacaaacaaaatcgtgtggatgctgcaaagaccctcttatttaaatgttctatattacag
gagcctaatatggaaagcctgcaagccttgtgtagtttagggctgatcaagcaggatgct
acacttgcaacagcagcacttaaagaactgttaaagcacacggggaaaaaagagaatgtt
tataagaggttccttcttgcatctgctgtctatgcattacaaggcagacatctggctgtt
caaagacaagtttctaaagctgtccacagcaacccagataattctgccctctggtccctg
ctgtcaagactggtccctcggtacgtgccacaaaatgccaagggtggagctgtggcagga
agtattgcttgtattcttgatctaaataatgggaagaaagccttgctgaataccgcagtt
aatcaactggccacaggatgtcacaaagctgaaaacaaaaagaatattctaaaagcaatt
catctttctccagatgatcctacagcttgggcagtactcttggctgcttgccatgcagaa
aacacaactgttcatctgcataataaacaacctaagcagacacatctggaaaaaatgatt
gtcagtgcaatttcagctaagactaaagaaaaagatcttccagcttccagagctcaagaa
atcgaagagtggtctcttttccaagctattactggcttaaatgaggcaggtagaacttca
gaagctgaggctctctgcgaaaagggattaaaagaatttcctgagcagccaatgtggtac
cttctcttaagacaagttcaatgcaaaccacttttgcagtctcgcaaagagcttcctgat
gccatcttggaagagctccgaaaggcagttctctccaactccacattgattacaggttgg
cattggttggcacaagtctatcagtcacaaggaatgatggttgctgcagaaatgtgttac
cgaaaaagtctaaaattggcatctcagcaaggcaatttgagtgggaaactctctagtctt
ctaagacttgctaaacttgccctggaaatctgtatggctaatgtttcaaatgatcactgg
ccatctctagttcaagaagccacaacagaagctatgaaaatttccttctgtccgctgggt
attctatttcaagcacttatgcagtataatcgcaaaatgggttcacgagaaacacgtcgt
atgttagagagagtggtatatcaatctggatttccagaaactgtagtatcagttgcccga
tggtatctcttaagacatttatatgccaaaaatgattatgaattaatagatgctcttaca
gcaaatgccaaagctaatggagatattcgagttttggaattagacaagaaactctcagca
gcagactcctag
DBGET
integrated database retrieval system
