Crotalus tigris (Tiger rattlesnake): 120307623
Help
Entry
120307623 CDS
T08476
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
VWA
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
VWA_2
DUF4998
CBM_4_9
Motif
Other DBs
NCBI-GeneID:
120307623
NCBI-ProteinID:
XP_039198483
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MQEYKVVPLGQNYFWISFLVLASFITLEVCAQGSNRLKLTVLSEDRLQMKWKESEGNTNG
YKVRVKPMAGDPEQEVMLKTKMAKATVGGLSPTKEYTLQIYILNGSQEALFVKRKFVIEE
LKNQSQARSHRKHPTRKVEPGKKRQNTPLLKPDDYMLNAEPTLTLSTLPSVIEFEEDFLA
RRKTSSDSFRKVSQFQCDTSAMTDIILLVDGSWSIGRNNFGLLREFLVSLLAPFNIAEDK
IRVGLSQYSSDPRTEWDLNTYSTWDQVSEAIRNLRYKGGNTFTGSALTHVLEQNLKEEVG
ARPEASKLLILLTDGKSQDDASPPAQILKNMGIKIFAVGVKNADEAELRQVASEPLEMTV
YNVVDFPLLRSLVSRLTWILCAWIKEKNQKNIGDPLKTMPANSGIHLSPTNLLLKDVTSR
SMHLIWNSPVIIPQRYRVVYYPSRGGIPKEVILDGATSSVELLNLTPQTEYLVSVFPIYE
NAVGDGLRGISSTLPLSAPRSLRTSEINHNSIKLTWEPVEGATQYLILSSSTPNGAEDDT
KELKVEQPEVWIRGLTPSTEYSLAVYAMYGEDASNPASIQETTLALSPPRYLHFSNISHM
STCVNWEAASQPVKSHRVMYSSSRGSNVGEVEVSGNVSFAVLKPLSSLTQYFVRVVSVYD
EGNSFPIMGNFTTLKVPPPSQLKVTELSRNEVQLEWEASTASDVVLYQIKWNVLGEDTEQ
EIPVAGNLASSVLPGLKENTEYKISIWAYYKDGAQSDTVSIWHRISAKNPPTNLYVDSET
PSSLRVHWTPPDAAVQHYRISYSPERSHSKQQDTITVSGRIQSIVLHSLLPARVYTVTVI
AVYVTGESDPVSVIGRTASVLARLPSVKESQFFKTQGCPSLRSTDGPLQGFDMMEAFGLM
DKEYASIKGIAMEPYIFLGTHTYTLYRDIQLTRKTSEVLPFGLPTEYTIAFLLRLLPESP
REAFSIWQITDEDFQPLLSIILD
NT seq
2950 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaatacaaggttgtcccgctgggccagaattatttttggatttctttcctggtg
cttgcaagttttatcaccttagaggtgtgtgctcaagggtcaaaccgcctgaagctgacg
gtcctttcggaagacagattacaaatgaagtggaaggaatccgaaggaaacaccaatggc
tacaaagttcgtgtaaagccaatggcaggtgaccctgaacaggaagtgatgttgaaaacc
aagatggcaaaagcaactgtgggtgggctgagtcccaccaaagaatacactctgcagatc
tacatccttaatggctcccaggaggccctctttgtcaagaggaaatttgtgatcgaagaa
ctgaaaaaccagtcccaggccagaagccacaggaagcaccccaccagaaaagttgagcca
gggaagaaaaggcaaaacactcctcttttgaagccagatgattatatgctcaacgccgag
ccaacattgacactgtcaaccttgccaagtgtaatagagtttgaagaggattttctggcc
cgaaggaaaacgagcagcgacagcttcaggaaagtttcccagttccagtgtgatacctct
gctatgacggatatcatcctgctggtggatggatcttggagtattggacgcaacaatttt
ggactgcttcgagaattcctggtgtctttgctggcgcctttcaatattgctgaggataag
atcagagtaggcttgtcccagtacagcagtgacccacggacagagtgggatctgaatact
tattccacctgggatcaggtgtccgaagccattcggaatttgcgctacaagggagggaac
acttttacaggttcagcgctgactcacgtcctggagcagaacctgaaggaagaagttggc
gctaggcctgaagcgtctaaactgctcatccttttgaccgatggcaaatctcaggatgat
gccagcccacccgcccagatcttgaagaatatgggaatcaagatatttgctgttggggtg
aaaaatgccgatgaagcagagctgcgtcaagtggcgtccgaaccccttgagatgaccgtc
tacaatgtggtggactttcctctgctccgttctctggtcagccggctcacttggatctta
tgtgcttggatcaaggagaagaaccagaagaacataggggaccctttgaaaaccatgcca
gcgaattccgggatccacttgagtccaactaatctcctattaaaagatgtcacttccaga
agtatgcatctcatctggaactcaccagtcataataccccaaagatacagagtggtctat
tatccttctcgaggtggcattcccaaagaggttattctggatggagccacctcgagtgta
gagctcctcaatttgacaccgcagacagaatatctggtttcagtcttccctatttacgag
aatgctgtaggagatggtctgaggggcatcagttctacactacctttgtctgcgcccaga
tctctcagaacatctgagattaaccacaacagtatcaagctcacgtgggaaccagttgaa
ggggccacgcagtatcttatcctgtcttcgtcaacacccaacggtgctgaagacgataca
aaagagctgaaagtagaacagccggaagtatggatcaggggcttgactcccagcactgaa
tactcactagcagtttatgccatgtatggagaagatgctagcaacccagcaagtattcag
gaaactactttggccctgagccctccaaggtatttgcatttctccaacatcagccatatg
tcgacctgcgtcaactgggaggcagcttcacaacctgtgaaaagtcaccgagttatgtat
tcctccagtagaggaagcaacgtgggtgaggtggaggtctctggaaatgtctcctttgct
gtgctgaagcccctctcctcactgacacaatactttgtccgtgtggtctctgtttatgat
gaaggcaactcgtttccaataatgggcaattttacgacattaaaggtgcccccaccgagc
cagctgaaggtcaccgagctctccagaaatgaggtccaactggaatgggaagcatccacc
gcttctgacgtggtcctttaccagatcaaatggaacgtgcttggagaagacacagaacag
gagatacccgttgctggaaacttggcatcttctgttttgcctggtttgaaagaaaatacc
gaatataagatttccatctgggcctactacaaagatggcgctcaaagtgacaccgtttcc
atttggcacagaatctctgccaagaacccacccacaaatctctatgtggattcggaaacc
cccagcagccttcgggttcactggactcctcctgacgcagcagtccagcactacagaatc
agctacagcccagaacggagtcacagcaagcagcaggacacgataacagtgtctggtagg
atccagtccattgttctccattctcttctgcctgctagagtctatacagtgaccgtaatt
gcagtctatgttacaggagagagtgaccctgtgtctgtcattggccggacagcttctgtc
ttggctcgattgcccagcgtgaaagaatctcagttcttcaaaacacagggctgcccttcg
cttcggtccacggatggccccctacaaggttttgacatgatggaggcatttggactgatg
gacaaggaatatgcctccattaaggggattgctatggaaccttacatcttcttgggaact
cacacctacaccctctacagagatatccagctaacccggaaaacaagtgaggtgttaccg
tttggacttccaactgaatataccattgctttcctactccgcctcctgccagaaagtccc
cgggaggccttttctatctggcagatcacagatgaggacttccagccacttctcagcatc
attcttgatc
DBGET
integrated database retrieval system
