KEGG   Crotalus tigris (Tiger rattlesnake): 120307647
Entry
120307647         CDS       T08476                                 
Symbol
WDR82
Name
(RefSeq) WD repeat-containing protein 82
  KO
K14962  COMPASS component SWD2
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    120307647 (WDR82)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctig03019]
    120307647 (WDR82)
   03036 Chromosome and associated proteins [BR:ctig03036]
    120307647 (WDR82)
Messenger RNA biogenesis [BR:ctig03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     120307647 (WDR82)
Chromosome and associated proteins [BR:ctig03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     120307647 (WDR82)
    COMPASS/SET1 complex (yeast)
     120307647 (WDR82)
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 Beta-prop_WDR90_POC16_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_IFT140_1st WD_LRWD1 PEP5_VPS11_N Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_EIPR1 Beta-prop_HPS5 VPS8_N MinC_C SMN_Tudor Beta-prop_VPS8
Other DBs
NCBI-GeneID: 120307647
NCBI-ProteinID: XP_039198531
LinkDB
Position
Unknown
AA seq 313 aa
MKLTDNVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLY
SKKYGVDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDD
TFISGSLDKTIRLWDLRSPNCQGLMHPQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFD
KGPFATFKMQYDRTCEWTGLKFSNDGKLVLISTNGGIIRLIDAFKGAVLHTFTGYNNSKA
VTLEASFTPDSQFIMIGSEDGKIHVWNGETGMKVAVLDGKHTGPITCLQFNPKFMTFASA
CSNMAFWLPTIDD
NT seq 942 nt   +upstreamnt  +downstreamnt
atgaagctgacggacaacgtgctgcggagcttccgcgtggccaaggtgttccgcgagaac
tcggacaagatcaactgcttcgatttcagccctaatggcgaaaccgtcatctccagcagc
gacgacgactccatcgtcctctacgactgccaggagggaaagcccaagagaacactttat
agtaaaaaatatggagttgatctcatcagatacactcatgcggccaacacggttgtgtac
agttccaataaaatagatgatactatcagatacctttctcttcatgacaataaatacatt
agatactttccaggacatagcaagagagttgttgctttatcaatgtctccagtagatgat
acctttatatctggctcacttgataagactatcagactttgggatcttcggtcaccaaat
tgccagggtctgatgcatccacaaggaaaacctgtatgctcatttgatccagaggggctg
atttttgcagctggggtcaattccgaaatggtgaaactttatgatcttcggtcctttgat
aagggtccatttgctacctttaagatgcaatatgatcgaacctgtgagtggactggcctg
aagttcagcaatgatggaaagcttgttcttatttcaactaatggagggatcatacgactc
attgatgcctttaaaggagcagttcttcacacatttacaggatataataatagcaaagct
gtcacactggaagcttcattcaccccagattctcagtttataatgattggatcagaggat
gggaagattcatgtctggaatggagagactggaatgaaggtagcagtgcttgatgggaaa
cacacaggacccattacctgtttgcaattcaaccccaagtttatgacatttgccagtgcg
tgctccaatatggccttttggttgccaactatagatgactag

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