KEGG   Crotalus tigris (Tiger rattlesnake): 120307939
Entry
120307939         CDS       T08476                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120307939 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctig03019]
    120307939 (RAE1)
   03036 Chromosome and associated proteins [BR:ctig03036]
    120307939 (RAE1)
Messenger RNA biogenesis [BR:ctig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120307939 (RAE1)
Chromosome and associated proteins [BR:ctig03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120307939 (RAE1)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_CDC20-Fz WDR55 WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd eIF2A ANAPC4_WD40 WD40_RFWD3 Beta-prop_IFT140_1st NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_HPS5 Beta-prop_SPT8 PepSY
Other DBs
NCBI-GeneID: 120307939
NCBI-ProteinID: XP_039199185
LinkDB
Position
Unknown
AA seq 369 aa
MSLFGSTSGFGTGGTSMFGSTATDNHNPMKDIEVTSPPDDSIGCLAFSPPTLPGNFLIAG
SWANDVRCWEIQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTGSCDKTAKMWDLNSNQA
IQIAQHEAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRTPTPMMTLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPAHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFSYASSYDWSKGHEFYNPQKKNYIFLRSAAE
ELKPRNKKY
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgagtttgtttgggtcaacatcaggatttggaaccggaggcaccagtatgtttggcagc
actgctacagataaccacaacccaatgaaggatattgaagttacttccccacctgatgac
agcataggttgtttggctttcagcccaccaacgttgccgggtaatttccttattgctgga
tcatgggcaaatgatgttcgttgttgggaaatccaggataacgggcaaactatcccaaaa
gcccaacagatgcatacaggaccagtactagatgtttgctggagtgatgatggaagtaaa
gtgttcacagggtcctgtgataaaactgccaaaatgtgggatcttaacagtaatcaagca
atacaaattgcacagcatgaagctcctgtaaagaccgtccattggattaaagcaccaaat
tatagttgtgtgatgactggaagttgggataaaacattaaagttttgggatacacgaacc
cccactcctatgatgacgctgcagttgcctgaacgatgctattgtgctgatgtgatatat
cccatggccgttgtggctactgcagaaaggggcttgatagtttatcagttagagaatcag
ccttctgaatttagaaggatagactctccacttaaacatcagcatcgttgtgtggctatt
ttcaaagacaaagtgaacaaacccacaggctttgcccttggaagtatcgaaggaagagtt
gccattcattatattaacccaccaaatcccgccaaagacaactttaccttcaaatgtcat
cgatccaatggtacaaacacatctgcgcctcaggatatctatgcagtaaacgggattgcc
ttccatcctgcccacggcactcttgcaaccgtagggtccgatggcagattcagtttctgg
gataaagatgcgcggacaaagctaaaaacatccgagcagctagaccagccaatatccgct
tgctgcttcaaccataacggcaacatattttcatatgcttctagttatgactggtcaaag
gggcatgaattctataatccccaaaagaaaaactatatttttctgcgcagtgctgctgaa
gaactaaaacctagaaataaaaagtattaa

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