Crotalus tigris (Tiger rattlesnake): 120307939
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Entry
120307939 CDS
T08476
Symbol
RAE1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120307939 (RAE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120307939 (RAE1)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120307939 (RAE1)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120307939 (RAE1)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120307939 (RAE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
eIF2A
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT140_1st
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_HPS5
Beta-prop_SPT8
PepSY
Motif
Other DBs
NCBI-GeneID:
120307939
NCBI-ProteinID:
XP_039199185
LinkDB
All DBs
Position
Unknown
AA seq
369 aa
AA seq
DB search
MSLFGSTSGFGTGGTSMFGSTATDNHNPMKDIEVTSPPDDSIGCLAFSPPTLPGNFLIAG
SWANDVRCWEIQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTGSCDKTAKMWDLNSNQA
IQIAQHEAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRTPTPMMTLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPAHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFSYASSYDWSKGHEFYNPQKKNYIFLRSAAE
ELKPRNKKY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgtttgggtcaacatcaggatttggaaccggaggcaccagtatgtttggcagc
actgctacagataaccacaacccaatgaaggatattgaagttacttccccacctgatgac
agcataggttgtttggctttcagcccaccaacgttgccgggtaatttccttattgctgga
tcatgggcaaatgatgttcgttgttgggaaatccaggataacgggcaaactatcccaaaa
gcccaacagatgcatacaggaccagtactagatgtttgctggagtgatgatggaagtaaa
gtgttcacagggtcctgtgataaaactgccaaaatgtgggatcttaacagtaatcaagca
atacaaattgcacagcatgaagctcctgtaaagaccgtccattggattaaagcaccaaat
tatagttgtgtgatgactggaagttgggataaaacattaaagttttgggatacacgaacc
cccactcctatgatgacgctgcagttgcctgaacgatgctattgtgctgatgtgatatat
cccatggccgttgtggctactgcagaaaggggcttgatagtttatcagttagagaatcag
ccttctgaatttagaaggatagactctccacttaaacatcagcatcgttgtgtggctatt
ttcaaagacaaagtgaacaaacccacaggctttgcccttggaagtatcgaaggaagagtt
gccattcattatattaacccaccaaatcccgccaaagacaactttaccttcaaatgtcat
cgatccaatggtacaaacacatctgcgcctcaggatatctatgcagtaaacgggattgcc
ttccatcctgcccacggcactcttgcaaccgtagggtccgatggcagattcagtttctgg
gataaagatgcgcggacaaagctaaaaacatccgagcagctagaccagccaatatccgct
tgctgcttcaaccataacggcaacatattttcatatgcttctagttatgactggtcaaag
gggcatgaattctataatccccaaaagaaaaactatatttttctgcgcagtgctgctgaa
gaactaaaacctagaaataaaaagtattaa
DBGET
integrated database retrieval system