Crotalus tigris (Tiger rattlesnake): 120308000
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Entry
120308000 CDS
T08476
Symbol
LDB3
Name
(RefSeq) LIM domain-binding protein 3 isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120308000 (LDB3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ctig04990
]
120308000 (LDB3)
Domain-containing proteins not elsewhere classified [BR:
ctig04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120308000 (LDB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
zf-C3HC4_3
DUF3854
Motif
Other DBs
NCBI-GeneID:
120308000
NCBI-ProteinID:
XP_039199326
LinkDB
All DBs
Position
Unknown
AA seq
717 aa
AA seq
DB search
MSFSVTLNGSGPWGFRLQGGKDFNMPLTISRITPGSKAAQSQMSQGDMVVAIDGVNTDGL
THLEAQNMIKSANYNLNLTLQKSKRPIPIPTSTPRIDSPMPVIPHQKDSVLEISGDGGSF
SPLNSNSVGARNSILASNGAHAGYLSRQETSLSQSSSFLMSASFRSSMSSSQPITPDLSP
AKSDLGSRTGLVFTQDNKAKHQLSPARQYNNPIGLYSAETLKEMAEMHKLSLSRRSSQGS
LLRGNLPVKDPHVDSASPVYQAVLKTQNKSEDELDDWSRRSSNLQSKSFRVLAQMTGTEY
MQDPDEDALRRSSVKKHVATTTENSTPVEHEPVSISCTSSAMPAASASPSSAAAASHSGV
HRMTLLPASASSGAYDSISSSCQSFHHQASTSVAYQSQKRGQAYGSAAAPHGPTPYTGYS
EAPAPASKPRVITTASIKPSVYQPAAPAPAPPSVSTHTYIPSQAEPASRPPWVTDDSFSQ
KFAPGKSTTTVTKHVLPKGAPVPPSSAPPPSIPASVQAPAIARGTIQRAERCPASSRTPL
CGHCNSIIRGPFLVAMGRSWHPEEFNCAYCKTSLADVGFVEEQNSVYCEHCYEQFFAPTC
ARCHTKIMGEVMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCEKDYVALFSTKCH
GCDFPVEAGDKFIEALGHTWHDTCFICAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcagtgtcactctcaatggatctggtccgtggggcttccgtctgcagggaggg
aaggacttcaacatgcctttgaccatctccaggatcacccctggcagcaaggcagcccag
tctcagatgagccagggagatatggtggtagccattgacggcgtcaacacagatggcttg
acccacctagaggcccagaatatgatcaaatcagcaaactacaacctgaatcttactctt
caaaaatcaaaacgtccaatcccgataccaacaagcaccccgaggattgattctcccatg
cctgtgatccctcatcaaaaggattcagtcttggaaatcagtggcgacggaggaagcttc
agtcccttaaatagcaactcagtgggggccaggaatagcattttagccagcaatggtgcc
cacgcaggctacctcagcagacaggagaccagtttgtcccaaagttcttccttcttaatg
agcgccagctttagatcttccatgtcctcctctcagcccattacccctgacctctcgcca
gcaaaatctgacttaggttcaagaacaggcctggtctttactcaggacaataaagcgaaa
caccagctgagccccgccaggcaatataacaaccccattggcctttactcagcagagacg
ctgaaagaaatggctgagatgcataagctaagtctcagccgaagatcttcccaaggttcg
cttcttagaggtaaccttcctgttaaagaccctcatgtagacagtgcctctccagtctat
caggctgtgcttaaaactcaaaacaagtctgaagatgagctggatgattggagccgtcga
tcttccaacttgcagtcaaagtccttccgagtccttgctcagatgacaggaactgagtac
atgcaagatccagatgaggatgccttgagaagatcaagtgtcaagaaacatgttgccacc
acaactgaaaacagtacccctgttgagcatgagcctgtgtctatcagctgcacctcttct
gctatgcctgctgcttcagccagtccgtcttctgctgctgctgcttctcatagtggtgtc
catcggatgacgctgctgccagcttctgcttcctctggggcttatgactccatctcatcc
tcctgccaaagcttccaccatcaagcttcgacttccgtcgcctaccagtcgcagaagaga
ggccaagcctacggctcagctgcggctccccatggcccaacgccttacacaggctacagt
gaagccccagcacctgcttcgaagccaagggttataaccactgccagcataaagccctcg
gtctatcagccagccgctccagcccctgccccaccatcggtgtccacacatacctatatt
ccaagccaagctgagcctgcaagccgtcccccctgggtgacggatgactccttctcccag
aagtttgctcctgggaaaagcaccaccaccgtcaccaagcacgttctgccaaagggtgct
ccagttcctccgtcttctgccccgcctccctccattcctgcatccgtccaggctcctgct
atcgcccggggaacaatccaaagagcagaacgctgccccgccagtagccgaactccgctc
tgtggacattgtaacagcatcatcagagggcccttcttggtagccatgggtcgctcttgg
caccctgaggaattcaactgtgcttattgcaagacctccctcgctgatgtgggctttgtg
gaggaacagaacagtgtctactgtgagcactgctacgaacagttctttgctccgacctgt
gccagatgccacaccaagatcatgggggaagtgatgcatgcattgaggcaaacgtggcat
accacttgcttcgtctgcgctgcctgtcggaaaccgtttggaaacagcctcttccacatg
gaggatggagagccctactgcgagaaagactacgttgccttgttcagtaccaaatgtcac
ggatgcgacttccccgttgaagctggcgacaagttcattgaagcccttggtcacacctgg
catgatacgtgcttcatttgcgctgtctgccatgtcaatttggaaggtcagccattttat
tcgaagaaagataaacctctgtgcaagaagcatgcccatgccatcaacgtctaa
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