Crotalus tigris (Tiger rattlesnake): 120308028
Help
Entry
120308028 CDS
T08476
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120308028 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctig01009
]
120308028 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120308028 (PCDH9)
Protein phosphatases and associated proteins [BR:
ctig01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120308028 (PCDH9)
Cell adhesion molecules [BR:
ctig04515
]
Cadherins
Protocadherins
120308028 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
EphA2_TM
RCR
DUF6249
7tm_3
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
120308028
NCBI-ProteinID:
XP_039199385
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAVAQELIYTIREELPENVPIGNIPKDLNVSHINAATGTST
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDRERLCAGAAYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVLQLHATDADVGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRALDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPINTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAIDGGQPPCSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPIPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPEDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQSQRRVTFH
LPDGSQESCSDSGLGDHEPVGSGMMVSHPLPLVQPQDEFYEQASPDKRTEADGNSDPNSG
E
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgcttgcggctggattct
gctgtcgctcaagaacttatttacaccatccgggaggaactgcctgaaaacgtccccatt
gggaacataccaaaggatctgaacgtttctcacatcaatgctgccaccggaaccagcact
agtcttgtctacaggctggtctccaaagcaggagatgcccctttggtgaaagtctccagc
accacgggagagatcttcaccacctccaaccggattgatcgggagagactctgcgcgggg
gccgcttacgcggaagagaacgagtgcttcttcgagctggaggtggtgatcctccccaat
gactttttcaggctgatcaagatcaagatcattgtgaaggacaccaacgacaatgccccc
atgttcccgtctcctgtcatcaacatctccatccctgagaacacgttgatcaacagccgc
ttccccatcccctccgccacagatccagacactggcttcaacggagtccagcattacgaa
cttctgaacgggcagagtgtctttgggttggatattgtggaaactccggaaggggaaaag
tggcctcagctgatcgtgcagcaaaatctagacagggagcagaaggacacttatgtgatg
aaaatcaaggtggaggatggaggaacaccccagaaatccagcacagccatccttcaggtc
acagtaagtgatgtcaatgacaacaggccagtttttaaagagagccaggtggaagtccac
atacctgagaacgccccggtagggacctctgtcctccagctccatgccacagatgcagat
gtgggaagcaatgcagaaatcagatacatttttggggcccaggttgctccggcaacaaaa
cgactctttgctttaaacaacaccactgggctaatcactgttcagagggccttggatcga
gaggagactgccatccacaaggtgacagttctagccagtgatggtagctcaactcctgcc
cgggccaccgttaccatcaacgtgactgatgttaatgataacccccctaacatagacctc
aggtacatcataagccccatcaatggcacagtgtacttatctgagaaagatcccatcaat
accaagattgcgctgattaccgtctcagataaggacaccgatgtgaatggcaaagttatc
tgtttcattgaaagagaggtgccatttcacttgaaagccgtttatgacaaccagtacttg
ttagagacctcttccttgctggactacgagggcaccaaagaattcagctttaaaatagtg
gcctctgactcaggcaaacccagtttgaaccagacagccctggtcagagtcaagttggag
gatgaaaacgacaaccctcccatctttagccagcctgttattgagctctcagtttctgaa
aacaaccgacgaggactgtatttaaccacgattagcgccactgacgaggacagtggtaag
aatgcagacattgtatatcagcttggtcccaatgcctccttttttgatctggatcgtaag
acaggggtcttgacagcttcccgggtgtttgaccgagaagaacaggagaggttcattttc
acagtcacggccagagacaacgggactcctcccttgcagagccaagcagctgtgattgtt
acggtgctagatgagaatgacaacagtcccaaattcacacataaccattttcagtttttt
gtgtctgagaacctaccaaagtatagtactgtaggagtgatcacagtgacggacgcagac
gcgggtgagaataaagctgtgactctctccatcttgaacgacaatgagaactttgttctg
gatccttattctggagttataaagtctaatgtgtcttttgatcgtgagcaacaaagttcc
tacacctttgatgtcaaggctattgatggaggacagccaccctgctcttctactgctaag
gtcaccattaatgtgatggatgttaatgacaacagcccagtggtcatctatcccccttct
aatacatcttttaagctggtacctctctcagctatcccagggtcggtggtagcagaagtg
tttgctgttgacatcgacacaggaatgaatgctgaactgaaatacacaatagtcagtgga
aacaacaaaggcttgttccgcattgatcctgtgacgggtaacatcaccctggaagagaaa
ccgattccaaccgatgtgggcttacatcggttggtggtcaacattagtgatctgggctat
cctaaatccttgcacacccttgtccttgtgtttctctatgtcaatgacactgcgggaaat
gcctcttatatttatgacctgatccgcaggactatggagacccctttggataggaatatc
ggggacagcagccagccctaccaaaacgaggactaccttaccatcatgattgccatcgtg
gcaggagccatggtagtcatcgtggtcatctttgtcaccgtgctggtccgctgccgccac
gcatccaggttcaaagctgcccagaggagcaagcaaggggccgagtggatgtcccccaac
caggagaacaagcagaacaagaagaagaagcggaagaaaaggaaatctcctaaaagttcc
ctgttgaattttgtgaccattgaggagtccaagcccgaggatgctgttcacgaacctatc
aacgggaccattagccttccagctgagctggaggagcagagtataggaagatttgactgg
ggcactgcaccacccaccacctttaagcctaacagccctgatctcgctaagcattacaaa
tctgcctctccacagtctgctttccatcttaagccggacactcccgtctcggtgaaaaag
catcacgtgattcaggagctccccttggacaacacctttgttggagggtgtgacaccctt
tccaaacgctcttccactagctcagaccacttcagtgcctcagagtgcagttcgcaagga
ggtttcaagacaaaaggccccttacacaccagacagtctcagcgtcgtgttacgtttcac
ctccctgatggttcgcaggaaagctgcagtgacagtggcctaggagatcatgagcctgtg
ggtagtggaatgatggtctcacatcctcttcctctggttcagccgcaggacgaattctac
gagcaggcctccccggacaagaggaccgaagcagatggaaattcggaccccaactctggt
gagtga
DBGET
integrated database retrieval system
