Crotalus tigris (Tiger rattlesnake): 120308122
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Entry
120308122 CDS
T08476
Symbol
TOP2B
Name
(RefSeq) DNA topoisomerase 2-beta isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ctig03032
]
120308122 (TOP2B)
03036 Chromosome and associated proteins [BR:
ctig03036
]
120308122 (TOP2B)
Enzymes [BR:
ctig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
120308122 (TOP2B)
DNA replication proteins [BR:
ctig03032
]
Eukaryotic type
DNA Topoisomerases
120308122 (TOP2B)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
120308122 (TOP2B)
Centrosome formation proteins
Centriole proteins
120308122 (TOP2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
DTHCT
Toprim
HATPase_c
Motif
Other DBs
NCBI-GeneID:
120308122
NCBI-ProteinID:
XP_039199609
LinkDB
All DBs
Position
Unknown
AA seq
1637 aa
AA seq
DB search
MAKSGGGGGGGGGGDGGNGSGGTGGGGGGGGSGGLTWVTLFDNQNNASKKEEPEQTNKND
SKKMSVERVYQKKTQLEHILLRPDTYIGSVEPLTQLMWVFDEDTGMNCREVTFVPGLYKI
FDEILVNAADNKQRDKNMTCIKISIDPESNIISIWNNGKGIPVVEHKVEKMYVPALIFGQ
LLTSSNYDDDEKKVTGGRNGYGAKLCNIFSTKFTVETACKEYKHSFKQTWMNNMLKTSDP
KIKHFEGDDYTCVTFQPDLSKFKMEKLDKDIVALMTRRAYDLAGACKGVKVMLNGKKLPV
NGFRSYVDLYVKDKLDETGLALKVIHEFANERWDVCLTLSEKGFQQISFVNSIATTKGGR
HVDYVVDQIVGKLIEVVKKKNKAGVSVKPFQVKNHIWVFINCLIENPSFDSQTKENMTLQ
PKGFGSKCQLSEKFFKAASNCGIVESILNWVKFKAQIQLNKKCSSVKHSKIKGIPKLDDA
NDAGGKHSLDCTLILTEGDSAKSLAVSGLGVIGRDRYGVFPLRGKILNVREASHKQIMEN
AEINNIIKIVGLQYKKSYEDPESLKTLRYGKIMIMTDQDQDGSHIKGLLINFIHHNWPSL
LKHGFLEEFITPIVKASKNKQELSFYSIPEFDEWKKHMENHKAWKIKYYKGLGTSTAKEA
KEYFADMERHRILFRYAGPEDDAAITLAFSKKKIDDRKEWLTNFMEDRRQRRLHGLPEQF
LYGTATKHLTYNDFINKELILFSNSDNERSIPSLVDGFKPGQRKVLYTCCKRNDKREVKV
AQLAGSVAEMSAYHHGEQALMMTIVNLAQNFVGSNNISLLQPIGQFGTRLHGGKDAASPR
YIFTMLSPLARLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKI
PNYDTREIVNNVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQYVVSGEIFVVDRNTVEIT
ELPVRTWTQVYKEQVLEPMLNGTEKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAG
LHKVFKLQTSLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLNYYGLRKEWLVGMLGAE
SIKFNNQARFILEKIQGKIAIENKSKKDLIQMLVQRGYESDPVKAWKEAQEKAAEEEEMQ
NLNDDSSSSSGSTSGPDFNYILNMSLWCLTKEKVEEIIKQRDTKGKELGDLKRKSSSDLW
KEDLAAFIEELDKVEAQEREDVLAGMTGKPIKGKVGKPKMKKLHLEETMPSPFGRRIVPQ
ITSAMKADASKKLLKKKKGDLDTSAIKLEFDEEFGGTSIEGTGEDLLNTSVPVIKTPKPK
REKKEPGTRVRRTPSVTKTSAKKVKKRNPWSDDESKSESDLEENDPVIIPRDSLLRRAAA
ERPKYTFDFSEEEDADDDEDANNNNDLNELKVKASPNINDREDEFVPSDSLEKDEYDFSP
IKSKPSPEKTSQDKTNQDFGNLFTFPSYSRKANIDTSKFDSDEEDSTSVFSSSFIPKQTE
TLSSKTVVTKKAKLSSDVPSKLKRSPKPKKMEIINSDSESEFGIPKKSIVPKGKGRGAKK
RKASGSENEGEYNPGGKPPKSIVSKKLKKTAFDQDSDVDIFPSDFASETTSRPRTGRARK
EVKYFAESDEDDDFAMF
NT seq
4914 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcagggggtggaggtggcggcggcggcggcggcgacggcggcaatggtagt
ggaggaaccggcggcggcggcggcggcggcggcagcgggggtctaacctgggtgacactg
tttgataatcaaaataatgcttcaaaaaaagaagaacccgaacaaacaaataaaaatgat
tcaaaaaagatgtctgttgagagagtttatcaaaaaaagactcaacttgagcatattctt
ctccgtcctgatacatacattggttcagtagaacctttaactcagttgatgtgggtgttc
gatgaagacacaggaatgaattgtagagaggtcacttttgttcctggtttatataaaata
tttgatgaaattcttgtaaatgcagctgacaataagcaaagagataagaatatgacatgt
atcaaaatatcaattgatcctgagtcaaatattataagtatttggaataatggaaaaggt
attcctgttgtggaacataaagttgaaaagatgtatgtccctgccttaatttttggacag
ctgttaacatccagtaattatgatgatgatgaaaaaaaagttacaggtggtcgcaatggc
tatggtgcaaaactttgtaatatattcagtaccaagtttacagttgagactgcttgcaaa
gaatacaaacatagttttaagcagacctggatgaataatatgctgaagacttcagatcct
aagattaaacattttgaaggagatgactatacatgtgtgacattccaaccagatctttct
aagtttaagatggaaaagcttgacaaagatatagtagctcttatgacaagaagagcttat
gatctggcaggagcatgcaaaggagtcaaagttatgcttaatggaaagaaactacctgtg
aatggctttcgtagttacgttgatctttatgtaaaggataagttggatgaaactggactt
gctctaaaagttattcatgaatttgctaatgaacgctgggatgtctgtcttactttaagt
gaaaagggatttcagcaaattagttttgtgaatagtattgctaccacaaagggaggtagg
catgttgattatgtggtagatcaaattgttggaaaattgatagaggtggtaaaaaaaaaa
aacaaagctggtgtttcagtaaaaccattccaggtaaagaaccatatatgggtttttatt
aattgtcttattgaaaacccttctttcgattctcaaacaaaagagaacatgacactccag
cctaaaggttttgggtccaaatgtcaattatcagaaaagtttttcaaagcagcttctaac
tgtggcattgtagaaagtatactaaactgggtgaaattcaaggcacagatacagctgaac
aaaaaatgttcatcggtgaaacatagtaaaattaaaggcattccaaaacttgatgatgct
aatgatgctggtggcaagcattctttggattgtacattaattttaactgagggagattcg
gccaaatctttagctgtctctggtttaggtgttattggaagagatagatatggggttttt
ccactcaggggaaaaattcttaacgttcgtgaggcatctcataaacagattatggaaaat
gcagaaattaataacattataaaaatagttggactacaatataagaaaagttacgaagat
ccagagtctctgaaaacattaagatatggcaaaattatgattatgactgatcaggatcaa
gatggatcacatataaagggtttgctaatcaattttattcatcataattggccttcactt
ctgaaacatggtttccttgaagaattcattactccaattgtaaaggcaagtaaaaataag
caggaactttccttctatagtattcctgaatttgatgaatggaaaaaacatatggagaat
cataaagcgtggaaaataaaatattacaaaggtttaggcactagcactgctaaagaagca
aaagaatattttgcagatatggaaagacatcggattttatttcgatatgctggtcctgaa
gatgatgcagccattacattggccttcagtaagaaaaaaattgatgacagaaaagaatgg
ttgacaaatttcatggaagatagaagacaacgtcggttgcatggcttaccagagcaattt
ctgtatgggaccgcaacaaagcatctcacttataatgactttatcaacaaggagttaatt
ctcttttccaactctgataatgagcgatccatcccatctcttgttgatggctttaaacca
ggacagcgtaaagttttatatacttgctgtaagagaaatgataaacgtgaagttaaagtt
gctcagttggctggttctgtggcagaaatgtctgcttatcaccatggagagcaagcttta
atgatgacaattgtcaacttggctcagaactttgttggaagtaataatatcagcttgcta
cagcctattggtcaatttggtactaggcttcatggtggcaaggatgctgcaagtcctcgt
tacatcttcaccatgttgagtcctttagcaagactactttttcctgcagtagatgacaat
cttcttaagttcctgtatgatgataatcagcgtgtggaacctgaatggtatattcccatc
attcctatggtcttaataaatggtgctgagggcatcggtacaggatgggcatgtaagatt
ccaaactatgatactagggagattgtgaacaacgtcagacgaatgttggatggattggat
cctcatcccatgcttccaaactacaaaaactttaaaggaacaatccaagaacttggtcag
aatcagtatgtagtgagtggagaaatatttgtggttgataggaacacagtagaaattaca
gaacttccagttcgaacatggactcaggtttataaagaacaagtattggaaccaatgttg
aatgggactgaaaaaacaccagcattaatttctgactacaaagaatatcacactgatacc
actgtgaaatttgttgtaaaaatgacagaagaaaagcttgctcaagcagaggctgctgga
ctacacaaagtctttaagcttcaaacaagtttaacttgtaattctatggtactatttgat
cacatgggatgtctgaagaaatatgaaactgtgcaagatatcttaaaagaattctttgac
ttacgtttaaattattatggtttgcgtaaggagtggcttgtaggaatgttaggggcagaa
tctataaagtttaacaatcaagctcgctttattttagagaaaattcaagggaaaattgcc
atagagaacaaatcaaagaaagatttgattcagatgttagtccagagaggttatgaatct
gaccctgtcaaagcctggaaggaagcgcaagaaaaagctgcagaagaggaagaaatgcag
aatctgaatgatgatagttcgtcttcttcaggatctacctcaggtccagatttcaattac
atcttaaatatgtctttatggtgtcttactaaagagaaagttgaagaaatcattaagcag
cgagatacaaaaggaaaggaactcggtgatctcaaaagaaaatcttcttctgacctttgg
aaagaagatttagcagcttttatagaagaacttgataaagtagaagctcaggaaagagag
gatgtactggcaggaatgactggcaaacccataaaaggcaaagttggtaaacccaagatg
aaaaaacttcacttagaagagaccatgccttcaccttttggtaggagaatagttccacag
attacatcagctatgaaagctgatgccagtaagaaattgcttaaaaaaaagaagggagac
cttgatacttcagcaataaagttagaatttgatgaagaatttggtggtacatcaatagaa
ggtactggagaagacttgcttaatacttctgttccagtgataaagacacctaagcccaag
agagaaaagaaagagcctggtactagagtgagaagaacaccatctgtcacaaagacttct
gcaaaaaaagtaaagaaacgaaatccatggtcagatgatgaatcaaaatctgaaagtgac
ttggaagaaaatgaccctgtgattattccaagagattctttacttagaagagctgcagct
gaaaggcccaaatacacctttgatttctcagaagaagaagatgctgatgatgatgaagat
gccaacaataataatgatcttaatgaattgaaagtaaaagcatctccaaacatcaatgac
agagaagatgaatttgtaccctcagatagtcttgaaaaggatgaatatgatttctctcca
atcaaatcaaaaccttctccagagaagacttcccaagacaaaactaatcaagattttggc
aacctgttcacctttccttcttattctcggaaagccaatattgatacatcaaaatttgac
agtgatgaggaagattcaacatcggtcttttcttcatcttttattccaaaacaaacagag
acactttcaagtaaaacagttgtcactaaaaaagcaaaactatcatcagatgtgccctct
aagctgaaaagatctcctaaacctaagaagatggaaataataaactctgattcagaatct
gaatttggtattccaaagaagtccatagttcccaaaggaaaaggcaggggagcaaagaaa
aggaaagcatctggttctgaaaatgaaggtgaatataaccccggaggaaaaccacccaag
tccattgtgagcaagaaactgaagaaaacagcctttgatcaggattctgatgtagacatt
ttcccatctgattttgcttctgaaacaacttccaggccacggacaggtcgggcaagaaaa
gaagtgaagtattttgcagagtctgatgaagatgacgattttgctatgttttaa
DBGET
integrated database retrieval system
