Crotalus tigris (Tiger rattlesnake): 120308172
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Entry
120308172 CDS
T08476
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120308172 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120308172 (SIN3A)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120308172 (SIN3A)
REST complex
120308172 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120308172 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
CPDase
Motif
Other DBs
NCBI-GeneID:
120308172
NCBI-ProteinID:
XP_039199771
LinkDB
All DBs
Position
Unknown
AA seq
1266 aa
AA seq
DB search
MKRRVEEQESPVYASQQRRIASSAEPFQHQHRVLAPAPPVYESVSETMQSATGIQYSVTP
SYQVSTVPQSSNSHGPTLATVHSGHHHPTPVQPHGSQVAQSHAHPTPPAAPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPAHGLQPQPPPQPQHPSQPSAQSAPTPAQ
PAPQPPPAKISKPSQLQAHTPTSQQAPPVPYASPRSPPVQPHTPVTISLGTTPSLQNNQP
VEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVYAQ
VARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTIKKPQLNSKQQRPN
QNGCQLRRHATTGVTPPVKKKPKLNLKDPSFAEAGKHGTESLFFDKVRKALRSTEAYENF
LRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESAHLESFPKERATEGIA
MEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCREVLNDTWVSFPSWSEDSTFVSSKKT
QYEEHIYRCEDERFELDVVLETNLATIRVLETIQKKLSRLSAEEQAKYRLDNTLGGSSEV
IHRKALQRIYADKAADIIDGLRKNPAVAVPIVLKRLKMKEEEWREAQRGFNKVWREQNEK
YYLKSLDHQGINFKQNDTKVLRSKSLLSEIETIYDERQEQTSEDNTGPHLSLAYEDKQIL
EDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSDLEEEEEEEMDVDEN
SGAVKKHNGVGGNSPKAKLLFSSTAAQKLRSLDEAYNLFYVNNNWYIFLRLHQILCLRLL
RIYSQAERQIEVDSREREWEREVLGVKREKSDTPAIQLRLKDPMDIEVEDYYPAFLDMVR
NLLDGNMDSSQYEDSLRDMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQVTELYLSE
SHNGATGGLLTSQPSRSLVETAYQRKAEQLMQDENCFKMMFVQSRGHVQLTIELLDTEEE
NSDDPVEAERWTDYVDRYVNSDSTSPELREQLAQKPVFLPRNLRQIRKCQRGREQQEKDG
KEVLGKKPLENVESLDKLECKFKLNSYKMVYVIKSEDYMYRRTALLRAHQSHERVSKRLH
QRFQAWVDRWTKEHVTREMAAETSQWLMGEALEGLLPCTTTCEAEDLHFVSINKYRVKYS
ATCKTP
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgagtggaggaacaggaatcgcccgtctatgcgtcccagcagagacgcatt
gccagcagcgccgaacccttccagcaccaacatcgcgtgctcgctccggccccccctgta
tatgaatctgtttcggagaccatgcaatccgctaccgggatccagtactcggtcactccc
agctaccaggtgtccacggttccccagagttccaacagccatggacccaccttagccacc
gtccacagcgggcaccaccaccccacccctgtccagccccatgggagccaagtggcgcaa
agccatgctcacccaactccaccagcagcgccagtccaggggcagcagcagttccagagg
ctgaaggtggaagacgctctttcctaccttgaccaggtgaagctgcaatttggtagccag
cctcaagtctacaatgacttcttggacataatgaaggagtttaaatctcaaagcatcgac
actccaggggtgatcagccgcgtctctcagctcttcaaaggccacccagatttgatcatg
ggtttcaacaccttcctgcctcccggctataaaatcgaagtccagaccaacgacatggtg
aacgtaaccaccccggggcaggtgcatcaaatcccagcccatggtctccagccacagccc
ccgccgcagccccagcacccgtctcagccctcggcacaatctgctcccaccccagcacag
ccagcaccgcagccgccacccgccaagatcagcaagccctcccagctacaggcgcacacg
cccaccagccagcaggcccctcccgtcccctacgcgtcgcctcgttctccgccggtccag
ccccacacgcccgtgacaatctctctggggacgaccccgtccctgcagaacaatcagccg
gtcgagttcaatcacgccatcaactacgtcaacaagatcaagaaccgtttccaagggcag
ccggacatttataaggctttcttggagatcctccacacctatcagaaagaacagcgaaat
gccaaggaagccggcgggaactacaccccggcgttgactgaacaggaagtctatgcccag
gtggcacgcctctttaagaaccaggaggacttgctctccgaatttgggcagttcttgcca
gacgcaaacagctcggttctcttgagcaagaccactgccgagaaagtggagtccgtgaga
aacgatcacggaggcaccattaagaaaccccagctcaacagcaagcagcagaggcccaat
cagaacggctgccaactccggaggcacgccaccacgggggtgaccccaccagtgaagaag
aaaccaaagcttaatttgaaggacccatcctttgcagaagctggcaaacatgggacagag
tctctgttctttgacaaggtccgcaaggcgctgcgtagcacagaggcctacgagaatttc
ctccgctgcctcgtcattttcaatcaggaggtcatttcccgagctgagctcgtacagctg
gtttctccatttctgggaaaattccccgagttgttcacttggtttaaaaatttcctgggc
tacaaagaatccgcacatctggagagcttcccgaaggagcgagctaccgaggggatagcg
atggagatagactatgcttcgtgcaaacggctgggctccagctaccgagccttgcctaaa
agttaccagcagcccaaatgcacaggccggacaccgttgtgcagggaggttttgaacgac
acctgggtctccttcccatcctggtccgaagattctacgtttgtgagctcgaagaagact
cagtacgaagagcacatctaccgatgcgaggacgagcggtttgagctggatgtggtcttg
gagaccaacctagccaccatccgggtcttggaaacgatacagaagaaactctcccgctta
tcggcggaagagcaagccaaataccgtctcgacaacaccttggggggctcgtccgaagtc
atccaccgcaaagctctgcagaggatatacgcagacaaagctgccgacatcatcgatggc
cttcggaaaaatccagccgtcgccgtccccattgtgttgaaaagattgaaaatgaaagaa
gaggaatggcgggaagcccagaggggattcaacaaagtgtggcgggaacagaacgagaaa
tactatttgaaatccctggatcatcagggcatcaatttcaagcagaacgacaccaaggtc
ctgcgatccaagagtcttctgagtgagattgagaccatttacgacgagaggcaagagcaa
acgtctgaagacaacaccggccctcacctgtccctggcttacgaggacaagcagattctg
gaagacgcagcctccctgatcatccaccatgtgaagcgtcagacgggcatccagaaagag
gacaagtacaaaatcaagcagatcatgtaccacttcatcccggacctcctcttcgctcag
cgaggggagctctctgacctggaggaggaggaagaggaggagatggacgtggacgagaac
tcgggggcggtgaagaagcacaacggagtggggggcaactcccccaaagccaaactgctc
ttcagcagcaccgcagctcagaagttgcgcagcctggacgaggcctacaatcttttctat
gtcaacaacaactggtacatcttcctgcgcctccaccagatcctgtgcctgcggctgttg
cggatctacagccaggcggagcggcagattgaggtggacagccgggagcgggagtgggag
cgggaagtgctgggagtgaagcgagagaagagtgacactccggccatccagctgcgcttg
aaagaccccatggacatcgaagtggaagactactaccctgctttcttggacatggtgcgg
aatctcctagacggcaacatggattcctctcagtacgaggactcgctgcgcgacatgttc
accattcacgcttacattgccttcaccatggacaagctcatccagagtattgtcagacag
ctccagcacatagtgagcgatgaaatctgcgtgcaggtgaccgagctctacttgtcggag
agccacaacggtgcgacgggagggctgctgacctcacagccctctcgctccctggtggaa
acggcctatcagcgcaaagccgagcagttgatgcaggatgagaactgtttcaagatgatg
ttcgttcagagccgaggccacgttcagttaaccattgaactgctggatacagaagaggag
aactctgacgatcctgttgaggcagagcgttggacggattacgtggatcgctatgtcaac
tctgactccacatctccagaactgcgggaacagctggcccagaagccggtgtttctgccc
aggaacctgcggcagatccgtaagtgccagagaggtcgggagcagcaggagaaggatggc
aaagaggtgctgggcaagaagcccctggagaacgtagagagtttggacaagctggagtgc
aagttcaagctgaactcctacaagatggtctacgtgatcaagtcggaggattacatgtac
cggaggactgccctgctgcgcgcccatcagtcccacgagcgagtcagcaagaggctgcac
cagcgtttccaggcctgggtggatcggtggacgaaagagcacgtcacccgcgagatggcg
gccgagaccagccagtggctcatgggggaagccctggagggcctgctgccctgcaccacc
acctgcgaggctgaggacttgcattttgtcagcatcaacaaataccgcgtgaagtacagc
gcaacctgtaagacgccctaa
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integrated database retrieval system
