Crotalus tigris (Tiger rattlesnake): 120308230
Help
Entry
120308230 CDS
T08476
Symbol
CFTR
Name
(RefSeq) cystic fibrosis transmembrane conductance regulator
KO
K05031
cystic fibrosis transmembrane conductance regulator [EC:
5.6.1.6
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig02010
ABC transporters
ctig04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120308230 (CFTR)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120308230 (CFTR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctig02000
]
120308230 (CFTR)
Enzymes [BR:
ctig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.6 channel-conductance-controlling ATPase
120308230 (CFTR)
Transporters [BR:
ctig02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC7 subgroup
120308230 (CFTR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
CFTR_R
ABC_tran
SMC_N
AAA_29
RsgA_GTPase
T2SSE
AAA_21
AAA_16
Intein_splicing
DUF87
NTPase_1
MeaB
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
120308230
NCBI-ProteinID:
XP_039199917
LinkDB
All DBs
Position
Unknown
AA seq
1468 aa
AA seq
DB search
MCPASEPGVDKINFKIPVLFCRWTKPILKKGYRQRLELSDIYQIPAADSADNLSEKLERE
WDRELASKKKPKLINALRRCFFWKFMLYGIILYLGEVTKSVQPLLLGRIIASYDPSNSLE
RSIAYYLAIGLCLLFIVRMLLLHPAIFGLHHIGMQIRIAMFSLIYKKILKLSSRVLDNIS
TGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVMLLMGLLWEMLQASAFCGLGFLILVVLF
QAWLGQMMMKYRDQRAGKINERLVITSEMIDNIQSVKAYCWEDAMENMVESLRQSELKLT
RKAAYVRYFNSSAFFFSGFFVVFLAVLPYALSHGIILRKIFTTISYCIVLRMTVTRQFPW
AVQTWYDSLGAINKIQDFLQKEEYKTLEYNLTTTGLELDKVTAFWDEGSGEIFTKTKQEN
SNNKIPSTNGGLFFTNFTLHFTPVLKDINFKIEKGQLLAVAGSTGAGKTSLLMLIMGELE
PLEGKIKHSGRISFCPQVSWIMPGTIKENIIFGVSYDEYRYKSVIKACQLKEDISKFPEK
DDTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDMLTEKEIFESCICKLIV
NKTRILVTSKLEHLKIADKILILHGGSCYFYGTFSELQGQRPNFSSELMGFDGFDHYSAE
RRNSILTETLRRLSVDYDGMASRNDMKKTSFKQTSDFTEKRKNSVMNALNSSRKFSLMRK
TSLQVNGKEEGLGEPVERKLSLVPESEQGEAILPRSNVLNSGPTFRGQRRQSVLNLMTRT
SSHPNQSIYKKGSISVIHQSSEADIYGRRLSRGSLVEITEELNEDDLKECFFDDSDTMNA
VTSWNTYFRYITIHKKMIVVLFICFIIFLIEVAASLFGVWYISSSAISPHPNKTESTKNH
SSDGLENGAVIVTETSSFYIFYIYVGVADTFLALGIFRGIPLVHTLITISKTLHRKMLHA
VLQAPMSSFNKLKAGGILNRFSKDIAILDDLLPLTVFDFIQLMLIVIGAIVVVSFIQPYI
FLASVPVIGAFVMLRAYFLHTSQQLKQLESEARSPIFTHLVTSLKGLWTLRAYGRQPYFE
TLFHKALNLHTANWFLYLSTLRWFQMRIEMIFVIFFIIVTFVSIATTGNGEGKVGIILTL
AMNIMGTLQWAVNTSIDVDSLMRSVSRVFKFIDLPTEESKPLPVLKNKALSHAVIIENMH
VKEENIWPSGGQMTVKNLTAKYIDGGLAVLENISFSIRSGQRVGLLGRTGSGKSTLLFAF
LRLLNTEGDIQIDGVSWNTVPVQQWRKAFGVIPQKVFIFSASFRKNLDPYGQWSDEELWN
VTEEVGLKSVIEQFPGQLDFVLIDGGYVLSHGHKQLMCLARSILSKAKILLLDEPSAHLD
QMTFQVIKKTLKHAFANCTVILSEHRLEALLECQQYLVIEENTVMQYESMPRVKLFPIYP
RNSSKRRSRPKISALQEETEEEVQETRL
NT seq
4407 nt
NT seq
+upstream
nt +downstream
nt
atgtgccctgcttctgaacctggagttgataagattaattttaaaatacctgtattattt
tgcagatggacaaagcctattttgaaaaagggctatagacagcgcctggaattatcagac
atttatcaaattcctgctgcagattctgctgataatctctctgaaaaattagaaagagaa
tgggacagagaattggcttccaagaaaaaacccaaactcatcaatgctcttagacggtgt
ttcttctggaaatttatgctgtatggaataatactgtatttaggggaagttactaaatcc
gtgcagcctcttttactcggaagaataattgcttcttatgatccttctaattcactcgaa
cgatcaatagcttactatttagccataggactctgtcttctcttcattgtacgaatgttg
cttctccacccagcaatatttggccttcatcacattggaatgcaaataaggatagccatg
tttagcttaatttataaaaagattttaaaactgtcaagcagagtcctagataacataagt
actggacaacttgttagcctcctttcaaacaatctgaacaaatttgatgaaggtctggcc
ttggctcattttgtatggattgcacctttacaagttatgctgctgatggggcttctttgg
gagatgttgcaggcatcagcattttgtgggcttggattcttgattcttgtcgtccttttt
caagcctggctaggacaaatgatgatgaaatacagagatcagcgagctggaaagatcaac
gaaagacttgtaattacctcagaaatgatagataatatacaatcagtgaaggcttattgt
tgggaagatgcaatggaaaatatggttgaaagtctgcgacaaagtgaactgaagctgacc
cgaaaagctgcatatgtgagatacttcaatagttcagctttcttcttctctggttttttt
gtggtatttttggctgtccttccatatgcactgagccatggaattattcttagaaaaata
tttactaccatatcatactgcattgttcttcgaatgacagtcactagacagttcccttgg
gcagtgcagacatggtatgattctcttggagcaataaacaagatacaggattttttgcaa
aaagaagaatacaaaacactggaatataatttaacaaccacaggccttgaactggataaa
gtaacagctttttgggatgagggaagtggcgagatctttacaaaaacaaaacaggagaac
agtaataataagattccatcaacaaatggtggtctcttcttcactaatttcactcttcat
tttactcctgtccttaaggacatcaacttcaagattgaaaagggacaattgcttgctgtt
gctggatctactggagcaggcaagacttctcttctaatgctgatcatgggagagttggaa
cctttagaaggtaaaattaaacacagtggaagaatttccttttgtcctcaagtgtcatgg
atcatgcctggaacaattaaagaaaacataatatttggtgtttcttacgatgaataccga
tataagagtgtcatcaaagcctgtcagttaaaagaggatatttcaaagtttccagagaaa
gatgacacagttttaggagaaggtggaataactctcagtggaggtcaacgagccagaatt
tctttagctagagcagtgtataaagatgctgatttgtatctcttggattctccttttggt
tatttagacatgttaacagagaaagaaatatttgaaagttgcatttgcaagcttattgtc
aataaaactagaatacttgtcacttcaaagttggaacacttaaagatagcagacaagata
ttgattctccatggaggaagctgttatttctatggaacattttctgaacttcagggtcag
cgacccaacttcagttctgagctgatgggatttgatggttttgaccattacagtgcagaa
agaagaaattccattcttacagaaacactgcggcgtctctctgttgattatgatggcatg
gcttcacgaaatgacatgaaaaaaacatcttttaaacaaacttcagattttactgagaaa
aggaagaattctgtaatgaatgcactaaattctagccgcaagttttctctcatgcgaaaa
acatcattgcaggtcaatggtaaggaagaaggtcttggagaaccagtagaaagaaagttg
tctttagtgccagagtctgaacaaggggaggcaattctgcctcgcagcaatgtattaaat
tcaggacccacattcagagggcagagaagacaatctgtacttaatttaatgaccagaaca
tcaagtcatccaaatcaaagcatttacaaaaaaggcagcatatcagtcatccatcaatct
tctgaagcagacatttatgggaggcgtttgtctcggggcagtctggtagaaataactgaa
gaacttaatgaagatgatttaaaggaatgtttctttgatgattcagacactatgaatgca
gtcacctcatggaatacatacttcagatatataaccatccacaaaaaaatgattgttgtg
ttatttatatgttttattatttttttaattgaggtggctgcttccctgtttggggtatgg
tatatcagtagttctgctatttcacctcacccgaataaaacagaatcaacaaaaaatcat
tcctctgatggactggagaacggtgcagttattgttactgagactagcagcttttatatc
ttctacatatatgtgggtgtggcagatacctttctagccctggggatctttagaggcata
cccctggtacatactcttataacaatttctaaaactcttcaccgcaagatgcttcatgca
gtacttcaggctccaatgtcgtccttcaacaaactcaaagcaggtggaatacttaacagg
ttttcaaaggatatagcaattctggatgacttattgccacttacagtatttgacttcatt
cagttaatgctcattgtgattggggctatagtagtagtctctttcatacaaccctatatc
ttcctggcatctgtgcctgtgataggagccttcgttatgttaagagcatacttcctgcac
acatctcaacagctgaaacaactggaatctgaagctagaagtccaattttcacacatctt
gttaccagcttaaagggactctggacattgagagcttatggacggcaaccatattttgaa
acgttattccataaagctctaaatttgcatacagcaaactggttcctgtatctgtctacg
ttacgttggtttcagatgagaatagaaatgatttttgtaatcttcttcattattgtgacc
tttgtttctattgctactacaggtaacggagaaggaaaagtcggcattattcttacatta
gccatgaacattatgggaacattgcaatgggctgtgaacacaagcattgatgtggacagt
ttgatgcggtcagtgagtagagtatttaaattcattgatctgccaacagaagaatctaaa
cctttaccggtattaaaaaataaggccctttctcatgctgtcataattgagaatatgcat
gtaaaggaagaaaacatctggccatctggtgggcaaatgacagtgaagaatcttactgct
aaatatatagatggaggattggcagtgttagaaaacatttccttttcaatacgttcagga
caaagggtgggccttctaggaagaactggctcagggaaaagtactttgctctttgctttt
ttaagactcttgaatacagaaggagatatccaaattgatggtgtctcctggaacacagtc
cctgtacagcagtggagaaaagcatttggagtaataccccagaaagtgttcatattctct
gcatcttttagaaaaaacttagatccttatggacaatggagtgatgaagaactatggaat
gttactgaagaggttggactgaaatctgtaatagagcaattcccaggccagcttgatttt
gttcttattgatggtggctatgtcctcagccatggacataagcaattgatgtgtcttgcc
agatcaattctcagtaaagctaaaattcttcttcttgatgaaccaagtgctcatcttgat
caaatgaccttccaagtcatcaaaaagacgctcaagcacgcatttgcaaactgtacagtg
attttatcagaacacagattagaagctctgctagaatgccagcaatacttggtcatagaa
gaaaacacagtcatgcaatatgaatcaatgcctcgagtcaagctcttcccaatatatcct
aggaactcaagcaagcgaaggtcaaggcctaaaatcagtgctttgcaagaggaaacagag
gaagaagttcaagaaacccggctgtga
DBGET
integrated database retrieval system
