| Entry |
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| Symbol |
COL18A1
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| Name |
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
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| KO |
| K06823 | collagen type XVIII alpha |
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| Organism |
ctig Crotalus tigris (Tiger rattlesnake)
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| Brite |
KEGG Orthology (KO) [BR:ctig00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:ctig04147]
120308306 (COL18A1)
00535 Proteoglycans [BR:ctig00535]
120308306 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:ctig00536]
120308306 (COL18A1)
Exosome [BR:ctig04147]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120308306 (COL18A1)
Proteoglycans [BR:ctig00535]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
120308306 (COL18A1)
Glycosaminoglycan binding proteins [BR:ctig00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
120308306 (COL18A1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
1857 aa
MARAIVNAWLLLVLFCCLANAQGWRNWFWRDSGETTLSPTKADEAEDETSQDLSTPAATI
NPNALFENTTDPEPRGKVGTIFTLKQPDFTATLPVPAATSPVQEEGRERNITGVGVEILS
VAEGLQNLVQLLEEKTTNRTERTKVSATAETSTSPAPVAEPGSTHNITANLTGDIQTSLE
TKKPEGGATKLARLWNKDFALLWNKTRIFPKKPGKPRQGSASFSFSPDGHFSGTMLVFQE
SPEAGQEVAFTPATRATWGIFSKKQGILPTAKALKLQESHTNSSSSGSSSGSSSLHAGMP
SKVVGTLDNWVLPYVTNPSQPASKGSGAHLSFKSHPFFKHFGIGVAHAKTNHSRGSVSNS
NATNVMDFPSANNSDSLEFLLTYAVQRSNSSSGLPSFLPGLTPSAGRCLPLPTKLSYCNH
LGTKHFRVPNYLHHGSEEEVWAALHEWEGLLKSRCHRYLEWFLCLLLVPGCNASLPVTPP
PCRGFCEALKDLCWTHWKEGHLPISCESLPEEDGPYSCVFVNVLAENFSREVGLLELIGD
PPPDQITKIYGPDKSPAYVFRPDANAGQVARYHLPSPFYRDFSLLFYIQATSDNAGVLFA
LTDASQSIIYVGVKLSEVKHGKQQIIFYYTEPGSQNSNVAATFTVPSLVNLWTRFALSVR
DYNVVLYMDCEEFKMVHLERSSGKIELEEGAGLFVGQAGGADPDKYQGIIVELKIKDNPW
AAGYQCVEEDDDCDTCGGSGSGLDIKQPSSEKESVIPLLPKLPVPPPVTSPDLAKKPVQL
EEAEYTVSPPHVPASGTKGEKGDPGEKGDRGPKGDPGAGVLSTNGDKGEKGEKGELGVKG
SAGFGYPGSKGQKGEPGIQGLPGPIGPPGPPGTIMRHSDGSTVQQPGAPLGPPGKDGQPG
KDGEPGDPGEDGKPGDVGPQGFPGTPGEPGLRGEKGEPGIGARGPPGPPGPPGKPGLSSK
LDKLTFIDMEGSGFGSELETLRGPRGPPGPPGPPGVPGLPGQPGRFGTNGTDLPGPPGLP
GVPGRNGNPGIAGPPGPPGPPGKDGMPGKPGEKGAPGESGEVGFPGAPGPKGNPGVPGSP
GVPGELGLAGLPGPMGPRGLPGPPGPGIAAEFVDMEGSGFPLVSGGPGARGPEGPPGLPG
LPGLPGPPGPKGDEGIIGLPGLPGEKGYPGLPGLDGRPGLEGFPGPQGQKGEEGSPGPKG
EKGQDGIGLPGPPGPPGQAVYLSGEDKTVPVSPGPEGPKGEKGDSGTPGLQGYPGLKGEK
GEPGVISRSDGTIIAKAEKGEAGPRGPMGPAGSPGRYGRKGEIGFPGRPGRPGMNGLKGE
KGDPADVSGALGLREGPPGPPGPPGPPGPPGPPVPVYENNAFGDLGPPGPPGLPGYHGQK
GEKGEQGLPGPPGQFPYDLSRFSSAFKGERGDKGDHGMKGEKGEPGGGSSAAGPPGPQGY
PGLPGPKGESIRGLPGPPGPQGPPGASFEGRPGPQGAPGPPGPPGPPSFPGPHRQHISIP
GPPGPPGPPGPPGGSDPPSLGVRILATYQNLMSRAHEVPEGQLLFIREREELYIRVHNGF
RKILLEERISIPGSGLDNEVYERSSSIHYSHGGTASSGSHRPFQPHLPVHARPEYSAYST
AKPWRGDESAVDSRRLPEQPAVHPPHQGAQSQQESLDHFFPNNRQTETAPLAVHTHHNFQ
PALHLIALNSPQSGSMRGIRGADFQCFQQARQVGLSGTFRAFLSSRLQDLYTIVRRADRS
TVPIVNLRDEVLFNNWEGLFSDAEAPFRTGVRILSFDGRDVLRDSAWPQKYVWHGSDSKG
RRLTESYCETWRTDDTVVTGQASSLASGKLLEQKSNSCRNAFVVLCIENSFMTSSKK |
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| NT seq |
5574 nt +upstreamnt +downstreamnt
atggctcgagcaatagtcaatgcttggcttctgctggtgctcttctgctgcttagccaat
gctcagggctggaggaattggttttggagagattcaggagaaaccacgctgtctcccacg
aaagctgacgaggctgaagatgagacaagccaggacctttccacacctgcagctaccatc
aacccaaatgccctctttgaaaatactactgatcctgagcccagggggaaagtggggacc
atatttaccctgaagcaaccagactttactgcaaccttaccagtccctgcagcaacatcg
cctgtccaggaagaaggcagagaaagaaatattacaggagtgggagtggagatcctcagc
gtggctgaaggccttcagaatttggttcagcttttggaggaaaagacaaccaacaggaca
gagaggaccaaggtatctgccacagctgagaccagcacatcacctgcccctgttgcagag
ccagggagtacccacaacattactgctaacttaacaggcgacatccagacctccctggaa
actaagaagccagaggggggggcaacaaagctcgctcgtctgtggaacaaagacttcgct
cttctgtggaacaagacacgcatcttcccgaagaaacctgggaagccacggcaaggtagt
gcctctttctcattttcacctgatggtcatttcagtggcaccatgttggtttttcaagaa
tctccagaagcggggcaagaagttgctttcaccccagcaacaagggcaacctggggcatt
ttctcgaaaaaacaagggattttgcctactgcaaaagctttgaaattgcaggaatcccac
accaatagcagcagtagtggcagcagcagcggcagcagcagcttgcatgcaggaatgcct
tccaaggtggtgggtactttagacaactgggtgctgccttatgttacaaatcccagccag
cctgcctccaaaggcagtggagcacacctcagctttaaaagccaccccttctttaaacat
tttgggataggagtagctcatgcaaaaacaaaccattctagaggttcagtatctaattcc
aatgcaactaatgttatggatttcccctctgccaataactctgactctcttgagtttcta
ctaacctacgctgtgcaacgtagcaatagcagttcagggcttccttccttcttacctgga
ttgactccatcagctggccggtgcttgcccttaccgaccaagttgtcgtattgcaaccac
ctgggcacgaagcatttccgagtgccgaattatttgcaccatggcagcgaggaggaagtt
tgggctgctttgcatgagtgggaggggcttcttaaatctcggtgtcaccgctacttggag
tggtttctctgcttgctactggtacctgggtgcaatgcttctctcccggtcacaccaccg
ccctgccggggattttgtgaggccctgaaagatctgtgttggactcactggaaagagggg
caccttccaatatcctgtgaatctctcccagaggaggacggtccatattcatgtgtattt
gtaaatgttttagcagaaaatttcagcagagaagttggtctcttagagttgattggagat
cctccaccagaccagataaccaaaatctatggcccagacaaaagtcctgcctacgtgttt
agaccggatgctaacgcaggacaagtggcacggtaccacctcccaagccccttttacaga
gacttctcactcttgttctacattcaagccacttcagacaacgcaggggtgctttttgct
cttacggatgcctcccagtcaatcatctatgttggtgtgaagctttctgaggtgaaacat
ggaaaacagcaaatcatattctactatacggagcctggttctcaaaattccaatgttgca
gccacatttactgtcccttccctggtcaatctgtggactcgctttgccctcagtgtgcgg
gattacaatgtggtgctttatatggactgtgaagaatttaagatggttcatcttgagagg
tcatctggtaagatagagctggaagaaggagcaggactttttgtgggacaagctggaggt
gcagatcctgataaataccagggcatcattgtagaattaaaaataaaagataatccctgg
gctgctggttaccagtgtgttgaagaagatgatgactgtgatacgtgtggtggtagtgga
agtggattagacataaagcaaccatcttccgaaaaggaaagcgtgattcctctgttacca
aaactgccagtgcccccacctgttacttcccctgaccttgccaaaaaacctgtgcaatta
gaggaggctgaatatactgtgagtccaccacatgttcctgcaagtggaaccaaaggtgaa
aagggagaccctggagagaaaggggaccgtggccccaaaggagatcctggggctggtgtt
ttgtcaaccaatggtgataaaggagaaaagggagaaaagggggagctgggtgtaaaggga
agtgcaggctttggatatccaggctctaaaggacagaaaggtgagcctggtattcaaggg
cttcctggtccaattgggcccccaggacctcctggaaccatcatgaggcactctgatggc
tctactgttcagcaaccaggagccccactaggacctcctggaaaagatggtcaacctgga
aaggatggagagcctggagatcctggtgaagatggtaaaccaggtgatgttggtccccaa
ggattccctggaactccgggtgagcctggcctaagaggcgaaaagggagaaccaggtatt
ggtgcaagaggtcctcctgggcccccaggcccacctgggaaacctggattgagttccaaa
ctggataagttgacatttattgatatggaggggtctggttttggaagtgagttggagact
ttgcggggtcccagaggaccacctgggcctccaggccctcctggtgtacctggtttacca
ggacaacctgggagatttgggacaaatggcactgaccttccaggacccccaggcctccct
ggagttccagggagaaatggcaacccaggaatagcaggacctccgggcccacctgggcct
ccaggaaaagatggcatgcctggtaaacctggagaaaaaggagcaccgggagaatcaggt
gaagtgggcttccctggagcacctggaccaaagggcaacccgggagtgccaggatcgcca
ggagtaccaggtgaacttggtctggcgggccttcctgggccgatgggaccacgtggattg
ccaggaccccctgggccaggcattgcggcagaatttgtcgacatggagggctcaggattc
ccccttgtttctggtggtcctggagctcgtgggccagaaggtcctccggggcttccagga
ctcccaggacttccggggcctccaggacccaagggagatgagggcatcattggtctccca
ggtttgccaggcgaaaagggatatcctggcttgccaggattagatggtcgccctggatta
gaaggcttcccaggaccacaaggacaaaagggagaagaaggaagcccagggcctaaaggt
gaaaagggtcaagatggaataggacttcctggccctccaggtcctccaggacaagccgta
tacctgtccggtgaagataaaactgtgcctgtttcgccaggcccagagggcccaaaggga
gaaaaaggtgactcaggaactccaggtttacaaggctatcctggacttaagggtgaaaaa
ggagagccaggagttatatctaggtctgatggaacaatcatagcaaaagcagaaaagggt
gaagcaggcccaaggggacctatgggaccagcagggtcacctgggcgatatggacggaag
ggagaaattggctttcctggaagacctggccggcctggtatgaatggactgaagggagaa
aaaggtgatccagcagacgtaagcggagcgctgggcttaagagagggtcctcctggcccc
cctgggcctccaggccccccaggccccccaggccccccagtacctgtttatgaaaataat
gcatttggtgatttgggccctccaggacctccaggattgcctgggtaccatggtcagaag
ggagaaaaaggtgaacagggtcttccgggtccaccaggccagttcccttatgacctcagc
agattcagctccgccttcaagggagaaagaggggacaaaggtgatcatgggatgaaaggt
gaaaagggtgaaccaggtggtggatcaagtgctgctgggcctcctggtccccaagggtat
cctggtcttccgggccctaaaggtgagagtatcaggggcctacctggccctccaggcccc
caaggacctccaggggcaagttttgaaggacgtccaggccctcaaggcgctcctggccct
cctggccctccgggacccccttctttcccaggtccccacaggcaacatatcagtattcca
ggaccaccaggtcctccgggaccgccaggacctccaggcggtagtgacccaccttctttg
ggggtacggattttagcaacgtaccagaacctgatgagcagagctcatgaggttccggaa
gggcagctccttttcatccgagagagagaagagctctacatccgtgtccacaatggcttc
agaaaaatccttctggaggaaagaatatccattcctggctctggactggacaatgaagtc
tatgaaaggtcttctagcatccactactctcatggagggacagcctcctctggatcccat
cgtccatttcagccacacttaccagtacatgcacgtccagaatatagtgcttattctact
gccaagccatggagaggggacgagagtgctgttgactcacgccgccttcctgagcaacct
gccgtccacccacctcaccagggagcacaatctcagcaagaatccttggaccatttcttt
cccaacaaccgccagactgaaacggctcctttggcagttcacacacatcacaacttccag
cctgctttgcatcttatagccctgaacagtccccagagcggcagcatgcgaggcatccga
ggagctgatttccaatgtttccagcaagctcggcaggttggactgtctggcactttccga
gcattcctgtcctctcggctgcaagatctctacaccatagtgcgcagagcagacaggagt
acagtgccaattgtcaatctcagggatgaagtgttgtttaataactgggagggcctcttc
tcggatgctgaagctccattcagaactggggttcgcatcctctcctttgatggaagggat
gtcctgagagactctgcctggcctcagaagtatgtgtggcatggctccgattccaagggg
cggcgattaacagagagctactgtgagacatggcggacagatgacaccgtggtgactggc
caggcttcctcgctggcatcaggcaagctgctcgaacagaagagcaacagctgcagaaac
gcctttgtcgtcctttgcatcgaaaacagcttcatgacctcttccaagaaatag |
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