Crotalus tigris (Tiger rattlesnake): 120308366
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Entry
120308366 CDS
T08476
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1 isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120308366 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctig04812
]
120308366 (SPTBN1)
Cytoskeleton proteins [BR:
ctig04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120308366 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
120308366 (SPTBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SLATT_6
Motif
Other DBs
NCBI-GeneID:
120308366
NCBI-ProteinID:
XP_039200270
LinkDB
All DBs
Position
Unknown
AA seq
2354 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLIGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELEAENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLSALRRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSIVRLLSKHKAFEDEMSGRSGHFQQAVKEGEDMITENHFGSEKIRERIS
DIQNQWANLEQLSSIRKKRLEEASLLHQFQADADDIDTWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRSIIDSLHEQAKALPQEYAESIDVQSRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEQWLINMEIPEKLEDLEVIQHRFESLEPEMNS
QASRVAVVNQIARQLIHNGHPNEKEIKAQQDKLNTRWSQFRELVDIKKDALISALSIQNY
HLECNETKSWIREKTKVIESTQELGNDLAGVIALQRKLTGMERDLVAIEAKLTDLQKEAE
KLESEHPDQARAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSR
TQTAIASEDMPNTLMEAEKLLTQHENIKNEINNYEEDYQKMRDIGEMVTQGQTDAQYMFL
HQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTT
LEGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHKKN
REVASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFM
AELGSNKEWLDKIQKEGMQLIAEKPETEAIVKEKLTNLHQMWQELESTTQTKAQRLFDAN
KAELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQ
SQAQALSQEGKSTDEVDGKRYTVEKKFLELLEPLNERKSHLLASKEIHQFNRDVEDEILW
VGERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIHGHQPRIDDIFERSQNILTDSSLNAE
AIQQRLADLQQLWNLLIEETEKRHKRLEESHKAQQYYFDAAEAEAWMSEQELYMMSEEKA
KDEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYA
GLKDLAEERRGRLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFR
EFARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQIL
AASYELHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVR
QLQEDAARLQSAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVR
DLMLWMDDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK
HYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLS
SREIGQSVDEVEKLIKRHEAFEKSAATWDERFSALERLTTLELLEVRRQQEEEERKRQPP
SPEPSPRTGEESQWDGIKGEKVAQNGLSPDQESPRMGEARETNEMVNGAADQRTSSKETS
PVPSPTADRKAKTSLQAQTAATLPAKTQEIPSAQMEGFLNRKHEWESHSKKASNRSWHNV
YCVINNQEMGFYKDAKAASSGIPYHSEIPVSLKEAICEVAVEYKKKKHVFKLRLTDGNEY
LFQGKDEEEMNTWIQAITSAISSDKIELSTSTQSTPASNRAQTLPASVTVTSESSPGKRE
KDKEKRFSLFGKKK
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacagtagcaacagactatgacaacattgaaatccaacagcaatatagcgat
gttaataaccgctgggatgtggatgactgggacaatgagaatagttctgctcggctgttt
gagaggtctcgcattaaagccttagcagatgagcgagaggcagtacagaaaaagacattc
actaagtgggttaactctcacttggcacgtgtatcctgcagaattacagacttgtacaca
gatcttcgtgatggacgaatgcttatcaaactgttggaagttctttcaggcgagagactc
cccaaaccaacaaagggaaggatgcgaatccattgcttggaaaacgttgacaaagctctc
cagttcctgaaagaacagcgagttcatcttgaaaacatgggatcccatgatattgtggat
ggaaatcacaggctaactcttggacttatttggacaattatattgagattccagattcag
gacatcagtgttgaaacagaagacaacaaagaaaagaaatctgctaaagatgccctactc
ctatggtgtcagatgaagacagctggctatcccaacgtcaacattcacaacttcaccacc
agctggagggacggcatggctttcaacgcactaatccataaacacaggcctgatttaatt
gattttgataagctgaagaaatcaaatgcacactacaatctgcagaatgcttttaacctg
gcagagcaacaccttggccttactaaactactggatcctgaagatatcagtgttgaccat
ccagatgaaaagtctattatcacctatgtagtgacatattaccactatttttctaagatg
aaagccttagctgttgaaggaaagcgaattggaaaggtgcttgacaatgcaattgaaacc
gagaagatgattgagaaatatgagtctcttgcctctgatctccttgagtggattgagcaa
accattatcattctgaacaatcgcaagtttgctaactcattgattggtgtgcagcaacag
ctacaagcattcaatacctaccgcacagtggaaaaaccgcccaaattcacagaaaaagga
aatttggaagtgctgcttttcaccatccagagtaaaatgagggctaacaatcaaaaagtg
tacatgcccagagaaggaaaactcatctcagatatcaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcattgcgtaatgagctcatccgacaggaaaaactg
gaacaacttgctcgcagattcgaccgtaaggcagctatgcgggagacttggctaagtgaa
aatcaacgtctggtttctcaggacaactttggatttgatcttccagctgtagaggctgca
acaaagaaacatgaagctattgagacagatattgcagcctatgaagaaagagtccaggca
gtggttgctgttgccaaggaacttgaagcagagaactatcatgatattaaacgcatcact
gcaaggaaagataatgtgattcgcctatgggaatatctcctggagttactaagggcacgc
aggcaacgactagagatgaaccttggtctgcaaaaaatcttccaagaaatgctgtatatt
atggattggatggatgagatgaaggttttgctactgtctcaagattatggcaaacatctc
ttgggggtagaagacctgctgcagaaacatgctcttgtggaggctgacattgccatacag
gctgagcgagtgagaggagtcaatgcatctgcccaaaaatttgctacagatggggaaggt
tacaaaccctgtgatccacaagttattcgagaccgtgtggctcacatggaattctgttac
caagagctatgtcagctctcagccctacgtcgtgctcgcttggaagagtcacgacgtctt
tggaaattcttctgggaaatggctgaagaggagggatggataagagaaaaggaacagatt
ttgtcatcagatgattatggaaaagacttaaccagcattgtccggcttcttagcaaacat
aaggcatttgaagatgagatgagtggtcggagtggtcatttccaacaagcagtcaaagaa
ggggaagacatgataactgagaatcactttgggtctgagaagatcagagagaggatttca
gatatccagaatcagtgggctaatttggagcagctctcttccatacggaagaaacgactg
gaagaagcttccctgcttcaccagttccaggctgatgctgatgacattgacacatggatg
ctggatatcctcaaaattgtctcaagcaatgatgttggccatgatgaatactcaactcaa
tccttggttaagaaacacaaagatgtggctgaagagattgcgagttacaggtcaataatt
gactctctacatgaacaagctaaagccttaccacaggagtatgcagaatccatagatgta
cagagcagattgtctggaatagaggaaaggtacaaagaggttgcagaactcacccggctt
cgtaagcaggcattgcaagacactttggctttgtataaaatgttcagtgaagcagatgct
tgtgaactttggattgacgagaaagaacagtggctgattaacatggagatacctgagaaa
ctggaagatctggaagtgatacagcacagatttgaaagtttagaaccagaaatgaatagt
caagcatcacgtgttgcagtggtcaatcagatagctaggcagctgattcacaatggacat
ccaaatgaaaaagagatcaaggcacagcaagataagctcaatacaaggtggagccaattt
agagaactggtggacataaagaaagatgctcttatctcagctctcagtatccagaactat
catcttgaatgtaatgaaaccaaatcttggatcagggagaagactaaagttattgaatct
acccaagagcttggcaatgacttggctggtgttatagctcttcagaggaagctaaccgga
atggaacgtgacttggtagctattgaggccaagctcactgatctccagaaagaggctgaa
aagttagaatcagagcatcctgatcaggctcgagctattctgtctagacttgctgaaatc
aatgatgtttgggaagaaatgaaaacaactttgaagaaccgtgaagagtccttgggagag
gcaagcaaactgcagcagtttttgcgtgacttagatgacttccagtcctggctttcccgg
acccaaacagccattgcctcagaagatatgcccaatacattgatggaagcagaaaagctg
cttacacagcatgagaacattaagaatgaaatcaataattatgaggaagactatcagaaa
atgagagatattggtgagatggtgacccagggccagactgatgctcagtacatgttctta
caccagcgtctgcaggccttggacactggatggaatgagcttcacaaaatgtgggaaaat
cggcagaatcttctttcccagtcccacgcttaccagttattccttagagacacaaagcaa
gcagaggcatttcttaacaaccaggaatatgttttggcacatactgaaatgcctaccact
ttggaaggagcggaagctgctatcaaaaaacaggaggatttcatgaccacaatggatgcc
aatgaggagaagatcaatgcagttgtagagacgggaagaagactggttagtgatgggaat
atcaactcagacaaaatccaagagaaagtagactccattgatgacagacataaaaagaat
cgtgaagtggccagtgaacttctgatgagattaaaagacaacagagatcttcaaaagttt
cttcaagattgtcaagagctgtctctttggattaacgagaagatgcttacagcacaagac
atgtcttatgatgaagcaagaaaccttcacagcaagtggctgaaacaccaagccttcatg
gctgagcttggctccaacaaagaatggcttgacaaaatccaaaaggaagggatgcagttg
attgccgaaaagcctgaaactgaagcaattgtgaaagagaagttgacaaacctacaccaa
atgtggcaagaactggaaagcaccacccaaacaaaagctcagcggctttttgatgccaat
aaggctgagctgttcacccagagctgtgctgacttagataaatggctgaatggcctggag
agccagatacaatcagatgattatggcaaagatctcaccagtgtcaacattttgctgaaa
aaacaacagatgcttgagaatcaaatggatgtacgtaagaaagagattgaggagctgcag
agtcaagcccaggcactgagtcaggaaggcaagagtactgatgaagttgatggtaaacgc
tacacggtggagaagaaattcttggaattgctggaacccttgaatgaaaggaagtctcac
ctactggcctctaaggagatccatcagttcaaccgggatgtggaggatgaaattttgtgg
gttggagaaaggatgcctattgccacatccacagatcatgggcacaaccttcagactgtt
caattgttaattaagaaaaatcagacactgcagaaagagatccatggacaccagcctcgt
atcgatgacatttttgagaggagccaaaacatccttacagacagcagccttaatgccgaa
gcaatccagcagcggcttgcagatttgcagcagctgtggaacctcctgattgaggagaca
gagaaacgccacaagcgccttgaggaatcccacaaagcccaacaatattattttgatgct
gcagaagctgaagcctggatgagtgaacaggagctatacatgatgtcagaagagaaggcc
aaggatgaacaaagtgcagtttctatgttgaagaaacatcagattttggaacaagctgta
gaagattatgctgagacagtccaccagctttccaagaccagcagaactttggtagcagat
aatcatccagagagtgaacgtatcagcatgaggcagtcgaaagtggataagttatatgca
ggcctgaaagaccttgctgaagagaggaggggcagattggatgagagacaccggctattc
cagctgaaccgtgaggtggatgacttggagcagtggatagcagaaagggaagtggtggct
gggtcccatgaactgggacaagattatgagcatgttacaatgttgcaagagagatttcgt
gaatttgctcgagacactgggaatattggacaggaacgtgttgataccgtcaatcacatg
gctgatgaactcattaattctggacattctgatgctgctactattgccgagtggaaagat
ggtctcaatgaggcctgggctgacctcttggaactcattgacacaagaacacagatcctt
gcagcctcttatgaactccacaaattttaccatgatgccaaggagatctttggacgaata
caggataaacataagaaactgcctgaagaacttgggcgggatcaaaacacagtagaaacc
ttgcaaaggatgcatacaacatttgagcatgatattcaggccttaggaacgcaggtgaga
caactccaagaggatgctgcccgccttcagtctgcctatgctggggacaaggctgatgat
atccagaagcgggaaaatgaggttttggaggcatggaaagcattgctagatgcctgcgaa
ggacgcagggtcagactagtggatactggtgacaaattccgtttcttcagtatggtccgt
gacctcatgctttggatggatgatgtaattcgccagattgaagcccaagaaaagccaagg
gatgtttcttctgtagaactgttgatgaacaatcaccaagggatcaaagcagaaatagat
gctcgaaatgatagctttacaacctgcattgagcttggtaaatcattgctggcaagaaaa
cactatgcttcagaagagataaaagagaagttactgcagttgacagaaaagagaaaagaa
atgattgacaagtgggaagacagatgggagtggctgagattgattttggaagtgcaccag
ttttcaagggatgccagtgttgccgaggcctggctgttgggacaggagccgtatttatca
agtcgtgaaatagggcaaagcgtggatgaagtagagaagctcatcaagaggcacgaagca
tttgaaaaatcagcagcaacttgggatgaaagattttcagcacttgaaagacttaccacg
ttggaattgttggaagtacgtagacagcaagaggaagaggagcggaagagacagcctcct
tctccagagccaagccccaggactggggaggagtctcagtgggatggcataaaaggagaa
aaggttgcccagaatggtttgtcaccagaccaggaatctccccggatgggagaagcaaga
gaaaccaatgaaatggtcaatggggcagcagaccagaggacaagttccaaagagacaagt
ccagttccttcaccaacagccgatcgcaaagccaagaccagcctccaagctcaaaccgct
gccactcttccagccaaaacacaagaaataccttccgcccagatggagggcttcttaaat
cgtaagcatgaatgggaatcacacagcaagaaggcctcaaacagatcctggcataatgtt
tactgtgttattaacaaccaagaaatgggtttctacaaagatgcaaaggcagcttcctca
ggcattccataccacagtgagatccctgtgagcctgaaagaagcgatatgtgaagtggca
gtagagtacaagaagaagaagcatgtattcaaattaaggttaactgatggcaatgagtac
cttttccaaggcaaagatgaagaggaaatgaacacatggatccaggccatcacatctgcc
atctcttcagacaaaattgagttgtccacaagtacacagagcaccccagcttcaaaccgt
gcccagaccttgccagccagtgtgacagtaaccagtgagtctagtcctggcaaacgggag
aaagacaaagagaagagattcagcctttttgggaaaaagaagtga
DBGET
integrated database retrieval system
