Crotalus tigris (Tiger rattlesnake): 120308381
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Entry
120308381 CDS
T08476
Symbol
PCDH18
Name
(RefSeq) protocadherin-18
KO
K16499
protocadherin delta 2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120308381 (PCDH18)
Cell adhesion molecules [BR:
ctig04515
]
Cadherins
Protocadherins
120308381 (PCDH18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
DUF3481
Syndecan
SusE
Motif
Other DBs
NCBI-GeneID:
120308381
NCBI-ProteinID:
XP_039200315
LinkDB
All DBs
Position
Unknown
AA seq
1131 aa
AA seq
DB search
MPRLGRKMHFMLLFALAAVMSCWEGAAGKNLKYRIYEEQRVGSVIARLSEDVADVLYRLP
NPSSVRFRAMQRGNSPLLLVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQ
LFHVEVEVLDINDNSPQFSRALIPLEISESAAVGMRIPLDSAFDPDVGENSLYTYSLSAN
DFFTIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDNGVPQRTGSSLLKISISDS
NDNSPVFEQQTYIIQLLENSHVGTLLIDLNATDPDEGANGKVVYSFSSHVSSKIIETFKM
DSERGQLTLLKPVDYETTKSYEIDAQAQDLGPNSIPAHCKIIIKVVDVNDNKPEINLNLM
SPGKEEIAYISEKASTETFVALVRVQDKDSGLNGEVVCKLHGHGHFKLQKTYENNYFILT
NTTLDREKRSEYSLTVIAEDKGTPSLSTVKHFSVQIIDENDNPPQFQTNRYETVILENNS
PGAYITSVTATDPDLGDNGQVTYTILESFILGISINTYVTTDLSTGAIYALRTFDHEEVN
QIVFMVQARDGGSPQLASNTTVVLTIIDENDNAPLIVGPALHNNTAEISIPKEADSNHCI
TRIRAIDRDSGVNAELSCSLATSSEEGLFVMDPQTCDIYLNASIESVTSTEWELTVVVRD
KGSPQLSTKALLKCSVVKNIYQLSSTEATYPSQAPLDISMITIISLGAICAVLLVVMVAF
ATMCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHKASPS
SSPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQG
QYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGF
SDLFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFQPQQSQP
PEEEEDHQEVESTEKKKSFSTFGKDNQNVEEAADMCTSSLLSEMNSVFQRLLPPSLDAYT
ECNEIEPPSSLERRKGHLPAKAVSYPQGVAAWAASTHFQNPANSTGLTLGIHSGAQPSSK
WLPAMEEIPENYEEDEFDNVLNHLSDGKHELMDASELVAEINKLLHDVRQN
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtttgggtcgaaaaatgcactttatgcttctctttgcactggccgccgtcatg
tcctgctgggaaggcgcagcgggcaaaaatctgaaatacaggatttatgaggagcagagg
gttggctcggtcattgccaggctttctgaagatgtcgccgacgttttgtataggttgcct
aatccctcttcggtgcgattcagagccatgcagagggggaattctccgttgctgctggtt
cgggaggacaacggagaaatcagcattggagctaaaattgaccgggagcaactctgccag
aaaaacttaaactgttctatagagtttgacgtgatcactctgccgactgaacatctgcag
cttttccatgtcgaggttgaagtattggatattaatgacaattcgcctcagttctccaga
gctcttattcctcttgaaatctcggagagtgcagccgtaggtatgaggattcctttggat
agtgcttttgatccagatgttggggaaaattccctctatacatactctctttctgccaat
gatttctttaccattgaagttagaacaaggacagatggagccaaatatgcagagttgatt
gtggtgcgggagctggaccgggagctgaaatcaagctatgaacttcagctaactgcctcg
gataatggtgtacctcagagaactggatcatctctcctaaaaatcagcatttcagattct
aatgacaatagtccagtttttgaacagcagacatacattattcaacttttagaaaattca
catgttggcacattacttattgacctcaatgccactgatccagatgagggtgccaatggc
aaagttgtctactcctttagtagtcatgtgtcctccaaaattatagagacttttaaaatg
gactctgaaaggggtcaactaactcttctcaaaccagtggattatgagaccaccaaatcc
tatgaaattgatgctcaggcacaagatttgggtccaaattcaattccggctcactgcaaa
atcattattaaggttgttgatgtgaatgacaacaagcctgaaatcaatttaaacctgatg
tctccaggaaaagaagaaattgcttatatttctgaaaaagcttccacagagacttttgtg
gccctggttagggtgcaagacaaagattctgggctgaatggagaagtggtttgcaagctt
catggacatgggcatttcaaacttcagaagacatatgagaataactatttcatcttaaca
aatactactctggatagagaaaagcgatctgaatacagcctgacagtcatagcagaagac
aaaggaactccaagtctttccacagtgaaacattttagtgtccagatcattgatgaaaat
gacaacccaccccaatttcagacaaacagatatgaaactgtaattttggaaaataattct
ccaggtgcttatatcacctctgttacagcaactgatccagatctgggagataatgggcag
gtgacctacactatcttggagagcttcattttgggaatttccataaatacatatgtgacc
actgatctttctactggagccatctatgcacttaggacttttgatcatgaggaagtaaac
cagattgtctttatggttcaagctagagatggagggagtccacagttggctagcaataca
acagtggtactaactattattgatgaaaatgataatgctcctttgattgtggggcctgca
ctgcacaataatacagcagaaatttcaatccctaaggaagctgacagtaaccattgcatc
actaggataagggccatagatagagactcgggagttaatgcagagttaagctgctcatta
gcaactagtagtgaagaaggcctctttgtgatggatccacagacatgtgacatttatctt
aatgctagcattgaatctgttacatcaacagaatgggaacttacagtggttgttagggac
aaaggaagtcctcaactgagtaccaaagcacttctgaaatgcagtgttgttaaaaatata
tatcagctttcatctacagaagcaacatatccaagccaagctcctctagacatttccatg
atcacaataatatccttaggagcaatatgtgcagttttgttggtggttatggtcgccttt
gctacaatgtgtaatcgtgagaagaaagacacccggtcctataattgtcgtgttgcagaa
tccacataccagcatcatcccaaaaggccatcaagacagattcacaaaggagacattaca
ttagtgcctaccattaatggtactttaccaattagatcccaccacaaagcttcaccttca
tcatctccaacactagaaagagggcaaatgagcagtagacaaagccatcacagtcatcaa
tctttaaatagtctggtgaccatctcatcaaatcatgtaccagagaatttctctcttgaa
ctcactcatgctactcctgctgttgaggtgtctcagcttctctccatgcttcatcaaggc
caatatcaaccaaggccaagttttcgaggcaacaagtattccagaagctacagatatgcc
cttcaagatatggataagttcagcctgaaagatagtggtcgtggtgacagtgaagcagga
gacagtgattatgatttagggagagattctcctattgacagacttcttggagaaggattc
agtgaccttttccttacagatgggagaattcctgcagccatgagattgtgcacagaggaa
tgcagagtcctggggcattcagaccagtgctggatgccacccctgccttccccatcttct
gattacagaagcaatatgtttatacctggagaagaatttcagcctcagcaaagccagcca
ccagaggaggaggaggaccatcaggaggttgaatcaactgaaaagaaaaagagcttttca
acttttggcaaagacaatcagaatgtagaagaagcagctgacatgtgtacctcttctctg
ctctctgaaatgaacagtgtcttccaacgtctcttgcctccttcactggatgcttacaca
gaatgtaatgaaatagagcctccaagctcactagagcgcaggaaaggacatttgccagcc
aaggctgtaagctatccacaaggggtggcagcatgggcagccagtactcattttcaaaac
cctgcaaacagcactgggcttactttgggaattcattcaggtgcccagccctcttcaaaa
tggctacctgccatggaggaaattccagagaactatgaagaagatgagtttgacaatgtg
ctgaaccacctcagtgatggtaaacacgaactcatggatgctagtgaactggtggcagaa
attaacaagctgctacatgatgtccggcagaactag
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