Crotalus tigris (Tiger rattlesnake): 120308762
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Entry
120308762 CDS
T08476
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03020
RNA polymerase
ctig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120308762 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
120308762 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120308762 (POLR2B)
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120308762 (POLR2B)
Enzymes [BR:
ctig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120308762 (POLR2B)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
120308762 (POLR2B)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120308762 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
120308762
NCBI-ProteinID:
XP_039201167
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPSRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMITLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGLMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMLSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatgcggacgaagatatgcaatatgatgaggatgatgatgaaatcactccagat
ctgtggcaagaagcatgctggattgtcatcagctcctattttgatgaaaaaggcctagtt
cgacagcagctggattcttttgatgagttcattcagatgtctgtgcaaagaattgtagaa
gatgccccaccaattgatctacaagcagaagctcaacatgctaccggtgaagtagaagaa
ccaccacgttatcttttgaaatttgaacaaatttatctgtccaagcctactcattgggaa
agagatggtgccccttcacctatgatgccaaatgaagccaggctcagaaatcttacgtat
tctgcaccactgtacgtggacataactaagacagttattaaggaaggagaagaccagctg
cagacacagcatcaaaaaacattcatcggaaaaattccgatcatgctgcgatccacgtac
tgcctattaaatggtttgactgatcgtgatctttgtgaactgaatgaatgccctcttgat
cctggaggctattttattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gctacaaacacagtatatgtgtttgcaaagaaagattctaaatatgcatacacaggagaa
tgccgttcttgcctggagaactcctctcgaccaacaagtactatatgggttagcatgttg
gccagaggtgggcagggtgcaaagaagagtgcgataggtcaacgtattgtggcaactttg
ccatatatcaagcaggaagtgcccatcattattgtgttccgtgcattagggtttgtatct
gacagagacatcttggagcatataatttatgactttgaagatcctgagatgatggaaatg
gttaagccgtctttggatgaagcatttgtcattcaggaacagaacgttgcattgaatttc
attggttcaagaggtgcaaagcccggtgtcactaaagagaagagaatcaagtatgccaaa
gaagtcttacagaaagagatgcttccacatgttggtgtcagtgacttctgtgaaacaaaa
aaggcttattttcttgggtacatggttcatagattgttgctagcagccttagggagacgg
gaattagatgatagggatcactacggcaacaagcggcttgaccttgcaggaccattactt
gcttttctcttcagaggaatgtttaagaatttgctgaaagaggttagaatatatgcccag
aaatttattgacagaggcaaagattttaacttggagttggcaattaaaacaaggattata
tcagatggtttgaaatactcactggcaactggcaactggggcgatcagaagaaagctcac
caagctagagctggagtgtcacaagtattgaatcgtctcacctttgcttctacactttcc
catttgcgacgcttaaactcacctattggaagagatggtaaactagcaaagcccaggcag
ttgcacaacactttgtggggaatggtttgtcctgctgaaactccagagggtcatgctgtg
gggcttgtgaagaatcttgctctgatggcctatatttctgtggggtctcagccatcccca
attctggaatttttagaagaatggagtatggaaaacctggaagaaatctccccagcagca
attgcagatgccacaaaaatatttgtgaatggttgctgggttggaattcacaaagatcca
gagcagcttatgaatactctgagaaaactgcggcggcaaatggacatcatagtgtcagag
gtgtccatgatcagagatatcagggaacgagaaattcgcatttatactgatgctgggagg
atctgccgcccacttctaattgtggaaaaacaaaaattgctactgaagaagaggcatatt
gaccaattgaaagaacgtgaatataacaactacagctggcaggatttggtggccagtggt
gtagtagaatacattgacactctagaagaggagactgttatgctggctatgactccagat
gacttgcaggagaaaggtgtggcatattgttccacatatacacactgtgagattcaccct
tccatgattctaggagtttgtgcatctattattccatttccagatcacaatcagtctcct
aggaatacataccaatctgctatgggcaaacaagccatgggagtttatatcactaatttc
catgtccgtatggatacattggcccatgttttatattatcctcagaagccccttgtgacc
acacgttctatggaatatttgaggttcagagagttgccagcaggcatcaactctatagtc
gccatagcttcatatacaggatataatcaagaagactctgttatcatgaaccgctctgct
gttgacagaggttttttcagatctgtgttctatcgctcttataaagaacaggagtccaaa
aagggatacgaccaagaagaagtgtttgagaaacctagccgtgaaacatgccaggggatg
aggcatgccatctatgacaagctggacgatgatggcttgattgcacctggcgtacgcgtc
tcaggagatgatgtcatcattggcaagacagtaactttgccggagaatgaagatgaactg
gagagcaccaatcgtcgctacaccaaaagggattgcagcacttttctacggaccagtgaa
actggtatagttgaccaggtcatgattaccttgaaccaggaaggatacaagttttgtaaa
ataagagtacggtctgttcgaataccacagattggagacaaatttgctagtagacatggt
cagaaaggtacctgtggtatccaatacaggcaagaggatatgccatttacctgtgaaggt
atcactcctgatataattatcaatccccacgctatcccttcgcgaatgaccattggccat
ttgattgaatgtcttcaaggaaaggtatcagcaaataaaggggagataggtgatgctaca
ccttttaatgatgccgtcaacgtgcagaagatttcaaacttgctctctgattatgggtat
catctgagaggaaatgaggttctgtacaatggctttactggccgcaaaatcacatcgcag
atctttattggccccacttattatcagcgactaaaacacatggtagatgataaaattcat
tccagggcaagaggacctattcagatccttaacaggcaacctatggagggtcgatctcgc
gatggaggtcttcgttttggagagatggagcgagactgtcagattgctcatggagcagcg
cagttcctaagggaaagattgtttgaagcctcagatccatatcaggttcatgtatgcaac
ttgtgtgggctaatggcaatagcaaacacccggacccacacctacgaatgcaggggttgt
cgtaataagacacagatttctctggtgagaatgccatatgcctgcaaactacttttccaa
gaattgatgtcgatgagtattgcacctcgaatgctgagtgtgtag
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integrated database retrieval system
