Crotalus tigris (Tiger rattlesnake): 120308918
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Entry
120308918 CDS
T08476
Symbol
JMJD1C
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120308918 (JMJD1C)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
120308918 (JMJD1C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
C1_2
FYVE
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
120308918
NCBI-ProteinID:
XP_039201529
LinkDB
All DBs
Position
Unknown
AA seq
2503 aa
AA seq
DB search
MAVLVESRPELVGKRFLCVGAGGEELPENGRWRAGIIRTVSHRELRSPELSVYVEFDDLE
WEKREWVKVYEDFAAFLVEYQLIWARRKDPSQSQGSKIKHIQWPALTFKPLVGKSIYSSI
TAVEFLVDKQLDFLSEDSAFQPYQDDIDSLNPVLRDNPQLQEEVKIWVKEQKVQEIFMQG
PYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRTMIVMNDQVLEPQNVDPSMVQMTFLDD
VVHSLLKGENIGITSRRRSRSSQNSNTAHGHYTRAQANSPRPAMNSQNAAPKQNSQQLQR
NARPNKRKGSDSSMPEEEKTKEEKYDCISHGENSKSKNKLYISKRRKPEDEERKKSAKRQ
RTDNTSDSSESSDSENSNKRLTDSSSEQNSDTELKSKNIVKINGKEGKSQSDTVEEKILI
GNQSHQRIERPESANLELQEISLHQAELPTVYDHSDNDGCIQECRMENKHPREHLPNEQF
VTNCPTPKSYIDTNTETSSVNQTQEHLSSSFSLQTGQETESPSSDSKHLFTNINILEVNK
SETVENWINNANKMELMQSNVGKNMSANEHLNSENIHCGSVPSLTVISLTEEGRVRKQTA
VLDAMRSKTGPQVENSKTKPNTSPEIKYKPVQSPDTVKSKVNYLNSHVIGITKTAVKTDP
DLPRSSFHSISPRVSSLEATKNALPVDKKEHFTIYRDPILLGQETGTNHMTPYLHQHNYP
PHCTSHRTSLNPSTHHSALTGTPHLLAESSNQTPLSAINTHPLSSASHHSVHHQHLLPAV
LPGMPTASLLGGHPRLETAHASSLSHLALAHQQQLLQHQSPHLLGQTHPSTSYNHLGLYP
VIWQYPNGAHAYSGLGIPSSKWVHSETSVNAETSSRRNTPSPWLHQPTPVTSSDGLGLLS
HIPVRPSSAEPHRPLKLASQSSPPLSKGIVDRHKDELERKGIFESIHSAKSDLEQNRSQA
AKEGHLQRQFVDPLQRSLQETGERLCKYKEEHRRILQESIEAASFTVKMKAHENEKESYS
RIMPLSSSNPPNHGGKPDKESELYKMKHSLPQTLPQSNYFTTLSNSVVNEPPRTYLSKEI
AGTCADKQNTCPSTTAAAAAQSLTPFTSSLSKPPPLIKHQPETESSVGKGTDQLSQQMMA
HSVSSFRTNSGSPTQLTISSSGSLRTMPALHRAPVFHPPVHPNLERKEGSYNCLSPPTLT
PVQPVNTGNKVHELQKPPTLVPEPKETQNIYKSVTDQKLSAIWKNSSCPNNEKTEWHMER
THGKSPSATASVIVRPPSSSKYDTVSIMQSAPKVQASERLKGINQIASIKSVEAKESGRI
VVSKMNSDVIHACYEKNFPAASQGSVPSSVVQTTTVLCSTITDVITSVTTTDAPGTGSSQ
VTDCLPKAGLPCMSADSIASRPINKDVIEECNVSSSASITVPCSKTESLQVSTGFSGPSD
FVHLKKHKAALAAAQFKINNTSDTESHTVKNLIYPASVSVDSAVKSSTINKGNTLSGGQV
SQTSQANYHPKLKKAWLTRHSEEDKITNKKESSENCVSEMIKPCTVNLIASTSNDLQNNV
DNKLAEEKLVKEEKHARRKTKRMYESGSESGDSDESESKSEQRTKRQPKPTYKKKQNDLQ
KRKGDLEEDVKPNGLLSRGAKEKTKLKLQSGNNNTGIPRSVLKDWRKVKKLKQTGESFLQ
DDSCYEIGPNLQKCRECRLIRSKKSEESAHSPVFCRFYYFRRLSFSKNGVVRIDGFSSPD
QYDDEAMNLWTHESYEDDEMDVETCKYILEHIGDKFCQLVTSEKTAMSWVKKDAKIAWKR
AVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERKSSRDKELYAWMKCVKGQPH
DHKHLMPTQIIPGSVLTELVEALHTLREKHEIKSHCHCSSKQNVQIGWFPPVNGVSQILQ
NVLNHSNKISLCIPELQQQKPSQKSEANGNTSPGSDISSESQLNPPESQSPLHWLADLAE
QKAREEKKENKDYPLGKHTKEEREQDNSESLNFKVSTPLSQNNEPGSTLRDLLTTTAGKL
RLGSTDAGIAFAPVYSTGTASSKSGRTMPNILDDIIASVVENKIPPNRTSKINIKSEMKE
EPKNNRKSISDDNNRLFSDIPHSWICNKHVLWLSDHENSNNWKLFKEWWKQGKFVLVSGI
HKKMNASLWKADFISSDFGDFQADLLNCKDSITASGSVKEFWDGFEEISKRQKNKNGEII
VLKLKDLPSGDDFRTMMPARYEDVLKSLPLPEYCNPEGKLNLASYLPGFFVRPDLGPRLC
STYGIAAAKDHDIGTTNLHIEVSDIVNILVSVGIAKGNGVPSKSGVLKKFEEEDLDDLLR
KRLKDSSELPGALWHIYAKQDAEKIKEFLHKIAKEQGLEVLPENDPIRDQSWYVNKTLRQ
RLFEEYGVKTCTLIQFLGDAVILPAGALHQVQNFHSCIQVIEDFVSPEHLTQSFHLTQEL
RLSKEEINYDDKLQIKNILCHAVKEMVRALKSHEHEIEDIEEN
NT seq
7512 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcctagtggagtcgcggccggaactggtgggcaagcgcttcttgtgcgtcggc
gccgggggagaggagcttcccgagaacgggcgttggagagccggcatcatccgcaccgtc
tcccaccgggagttgcgcagccccgagttgtcggtatatgtggaatttgatgatctcgaa
tgggaaaaacgagaatgggttaaagtttatgaagattttgcagcattccttgtggaatac
caattgatctgggcaaggaggaaggaccctagccagtctcagggatcaaaaatcaagcat
attcagtggcctgcattgacttttaaacctttggttgggaaaagtatatacagttctatt
actgcagttgaatttcttgtggacaaacagctggatttcttatctgaggatagtgccttt
cagccctatcaggatgatatagacagtttaaacccagttctcagggataatccgcagctt
caagaggaagtaaaaatctgggtgaaggaacaaaaagttcaagagatttttatgcaaggt
ccttattctttaaacggctatagggtgagagtatatagacaggactctgccacccaatgg
ttcactggtataattactcatcatgatctgttcagtcgcactatgattgttatgaatgat
caggtattagagccacaaaatgttgatccgtctatggttcagatgacctttctagatgat
gttgttcattctttgctgaaaggtgaaaatataggcattacgtcacgacgcaggtctcgt
tccagtcaaaacagcaacacagctcacggccactatacccgagctcaagcaaatagcccc
aggccagcaatgaattcccaaaatgcagcaccaaaacaaaattcacagcagttacaacga
aacgctcgtccaaataaaaggaaaggttccgacagtagcatgccggaggaagagaaaact
aaagaagaaaaatatgactgtataagccatggagaaaattccaaaagtaaaaataaatta
tacatttccaaaagaagaaaaccagaagatgaggagagaaaaaagagcgcaaagagacag
cggacagacaacacttctgacagttccgagagtagtgactctgaaaattcaaacaaaaga
ttgacagattcttcctcagagcaaaattcagatactgaattgaaaagcaaaaacattgta
aagataaatgggaaagaaggaaaatcccagagtgacacggtagaagaaaaaatcctaata
ggtaaccagtctcatcaacggatagaaagaccagaatcagccaatttggaattgcaagaa
atttcactccatcaagctgaactgccaacagtctatgatcatagtgataatgatggctgc
attcaagagtgcagaatggaaaataagcatcccagggagcacctacccaatgaacaattt
gtaaccaattgtcccacaccaaaaagttatattgacacaaatactgaaaccagttcagtt
aatcagactcaggaacacttatcaagtagttttagtttacaaactggtcaggaaacagaa
tctcctagcagtgattctaaacacctgtttaccaatatcaacattctggaagtaaacaaa
tcagaaactgttgagaactggattaataatgccaataaaatggaactgatgcaatcaaat
gttgggaaaaatatgtcagcaaatgaacatttaaattctgaaaacattcactgtggttct
gtaccatctttaactgtaatatctctaacagaagaaggcagagttcgtaaacaaactgca
gtcttggatgctatgaggtcaaaaactggtccacaggttgaaaattctaaaaccaagcca
aacacctctccagaaattaaatataaacctgtccagtcacctgatactgtgaaatccaag
gttaattatcttaacagccatgttattggaataacaaagacagcggttaaaacagatcct
gatttgcccaggtctagcttccattcaatttcacctagagttagttcattagaagctact
aaaaatgctcttcctgttgacaaaaaagaacatttcacaatttacagagatcccattctt
cttggtcaggaaacgggaactaatcatatgaccccctatttacatcagcataattaccca
cctcattgcacttcccatagaacttctttaaatccaagcacccatcactctgcattaaca
ggcacaccccatttattagccgaatcctcaaatcaaactccattgtctgctattaacaca
catcctcttagcagtgcatctcatcattctgttcaccatcaacatctgctccctgcagtt
ctaccaggaatgcctacagcctctttgttgggaggtcatccacgactagaaactgctcac
gcaagcagtttaagtcatttagcattagcacatcagcagcagctgctacagcaccagtca
ccacatcttcttgggcaaactcacccatctacttcatataatcatttaggactttatcca
gttatttggcagtatccaaatggagcacatgcttattcaggacttggaataccatcgtcc
aaatgggtccattcggaaacttctgttaacgctgagacttcttcgaggagaaatactcct
agtccttggttacaccagcccacccctgtgacctcatctgatggtcttggactgctgagt
catattcctgtaagaccgtctagtgcagagccacatcgaccactcaaattggcatcccag
tctagtcctcccttgtcaaaaggcatagtggatcgacataaagatgaattggagaggaag
ggaatttttgaatctatacattcagcaaaatcagatctagaacagaacagatcacaggct
gcaaaagaaggccacttacaaagacaatttgtagatcctctgcaaagatcacttcaagag
acgggggagagactatgcaagtataaagaagaacacagacgaatactgcaggaaagcatt
gaggccgcttcttttacagttaaaatgaaggcccatgaaaatgaaaaggagtcttattct
agaataatgcctttatcatcctctaaccccccaaaccatggaggaaaacctgacaaagaa
tcagaactctataaaatgaagcattcactaccccagaccttgccacaaagtaattacttt
accaccttgtctaatagtgtggtgaatgaacctccacgaacatacttgtcaaaggaaatt
gcaggcacgtgtgctgataaacagaatacttgtccatcaacaacagctgctgctgctgct
caatcactcactcctttcacgtcatccctttcaaaacctccgcctttgattaagcaccag
ccagaaactgaaagctcagtgggcaagggaacagatcagctttcacagcaaatgatggcc
cattcagtcagttcttttagaactaacagtggaagccctactcagttaacaatttcatcc
tctggttcgctccgaacaatgcctgctttacacagggcacctgtgtttcacccgcctgtc
catcccaacttggagaggaaagaagggagttacaattgtctttctcctccaaccttaact
ccagtgcagccagttaatacaggtaacaaagtccacgaattacaaaagccaccaacttta
gtacctgagccaaaggaaacacaaaatatttataagagtgtcacagatcagaaactttca
gctatatggaaaaatagtagttgtccaaataatgaaaaaacagaatggcacatggaaaga
actcatgggaaatcaccttctgccacagcttctgtcattgtacgcccaccttcaagttca
aagtatgataccgtatcaatcatgcagtcagctcccaaagtgcaagctagtgaaagatta
aaaggaataaatcaaatagcttccattaaatcagtggaagccaaggagagtgggagaata
gttgtgtcaaaaatgaattcagatgtgattcatgcctgctacgaaaagaattttccagct
gcttcccagggcagtgttcccagttcagttgtgcaaaccacaactgtgttatgcagtacc
ataacagatgtaatcacatcagtgactactactgatgcaccaggtacaggcagttcacaa
gtgacagattgtttgccaaaagcagggttaccctgtatgtcagcagacagtattgcctct
aggcccataaataaggatgtaatagaggaatgtaatgtcagctcatccgcttctattaca
gtgccttgcagcaaaacagaaagtcttcaggtgagcactggattctctggcccatcagac
tttgttcacttgaaaaagcacaaggcagcattggctgcagctcagtttaaaattaacaat
accagtgatactgaatctcatactgtgaaaaatctaatatatccagcctctgtttctgtg
gatagtgctgtcaaatcaagtacaatcaacaaaggaaatactctgagtggtgggcaagtt
tcgcagaccagtcaagcaaactatcacccaaagttaaaaaaagcctggctcacaaggcat
tcagaagaagacaaaatcactaataaaaaggagagttcagaaaactgtgtatcagaaatg
attaaaccatgtactgttaacttaattgcttctacatcaaatgatttgcaaaacaatgta
gataataaattagcagaggaaaagcttgtgaaagaagagaaacatgcaaggagaaaaaca
aaaagaatgtatgaatctggctcggaaagtggagattctgatgagagtgagagcaagtca
gagcagaggacaaaacggcagccgaagcccacctacaaaaagaaacagaatgatttgcaa
aagaggaaaggagacctggaggaagatgtaaaacccaatggccttctcagcaggggtgcc
aaagaaaaaaccaaattgaagttacagagtggtaacaataacactggcatacctcgttca
gtattaaaggactggcgtaaagtcaagaagctgaagcaaactggagaatcttttttgcaa
gatgattcttgctatgaaataggacccaatttgcaaaaatgcagagaatgtagactgatt
agaagcaagaaaagtgaagaatcagctcattcgccagtattctgcagattctattacttt
cgccggctttcctttagcaaaaatggagtggttcggattgatggcttttcttctcctgat
cagtatgatgatgaagctatgaatttatggacacatgaaagttatgaagatgatgaaatg
gatgtagaaacttgcaaatacatcttagaacatataggtgacaaattttgtcagttagtg
acatctgaaaaaacagctatgtcctgggtcaaaaaggatgccaaaattgcttggaagaga
gcagtcagaggagtccgtgaaatgtgtgatgcctgtgaggccaccctgtttaatatccac
tgggtctgccaaaaatgtggatttgtggtctgtctagattgctataaggctaaggaaagg
aagagttccagagataaagaactatatgcatggatgaaatgtgtgaaaggacaacctcac
gatcataaacatttaatgccaactcaaattattcctggatctgttttaacggaacttgtc
gaagcattgcatactcttagagagaaacatgaaattaaatcccattgccattgtagcagc
aaacagaatgtacaaattggctggtttcccccagtgaatggagtatctcagattttacag
aatgtccttaatcacagtaataaaatttctctgtgcatacccgagttacaacagcaaaag
ccatctcagaaatccgaagcaaatggcaacacaagccctgggagtgacataagttcagag
agccagttaaatcctcctgagtcacaatccccactgcattggttggcagatctagcggaa
caaaaggctagagaagaaaaaaaagaaaacaaagattatccccttggaaagcatactaag
gaggaacgagagcaagacaactcggaatctcttaatttcaaggtgtcaactcctttgtct
caaaataatgagccgggctccacattacgagacctactgactactacagctggcaaattg
cgcctaggctccacagatgctggcattgcttttgctccagtttattcaacaggaacagca
agtagcaaaagtggaaggactatgccaaacattcttgatgacataattgcttcagttgta
gaaaacaagataccaccaaatagaacatcaaagataaatatcaaatctgaaatgaaggaa
gagccaaagaacaatagaaaaagcatttcagatgataacaacagattattcagtgatatt
ccacattcatggatttgtaataagcatgttttgtggctcagcgatcatgaaaacagcaac
aactggaaactcttcaaagagtggtggaaacaaggaaagtttgtattagtctctggaatc
cacaaaaaaatgaacgccagtttgtggaaagcagattttattagttcagattttggtgat
ttccaagctgatcttctgaactgcaaagatagcattactgcaagtggcagtgtcaaggaa
ttctgggatggttttgaagaaatttcaaagcggcaaaaaaataaaaatggagaaatcatt
gtactgaagctgaaagacttgccttcaggggatgatttcaggaccatgatgcctgcaagg
tatgaagatgtattaaaaagtttaccgctgcctgaatattgtaacccagagggaaaactt
aatttggcttcatacttgccaggattttttgtacgcccagatttaggacctagattatgc
agcacctatggtatagctgctgcaaaagaccatgatataggaactacaaatcttcatatt
gaagtatctgacattgtgaacatccttgtcagtgttggtatagcaaaggggaatggagtc
ccttcaaaatcaggggtattaaaaaagtttgaagaagaagatttggatgatctgctaaga
aaaagactgaaggattcaagtgaattgccaggtgccttgtggcatatttatgccaagcag
gatgctgaaaaaataaaggagtttctacacaagatcgcaaaggaacaaggtttagaagta
ttgccagagaatgatccaatacgtgatcagagttggtatgtaaataaaacgcttcgccaa
agactgtttgaagaatatggagtaaaaacatgtactctgatccagtttcttggtgatgct
gttattttaccagcaggagctctgcaccaggtgcaaaattttcatagctgtattcaagta
atagaagactttgtatctccagaacaccttacacaatcttttcatttaacacaagaactt
agactctcaaaggaagaaatcaactatgatgataagctgcagataaaaaatatattatgt
catgcagttaaggaaatggtaagagctttgaaatctcacgaacatgaaattgaagatatc
gaagaaaattaa
DBGET
integrated database retrieval system
