Crotalus tigris (Tiger rattlesnake): 120308942
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Entry
120308942 CDS
T08476
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein isoform X1
KO
K11988
sonic hedgehog
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120308942 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ctig01002
]
120308942 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ctig00536
]
120308942 (SHH)
Peptidases and inhibitors [BR:
ctig01002
]
Cysteine peptidases
Family C46: hedgehog family
120308942 (SHH)
Glycosaminoglycan binding proteins [BR:
ctig00536
]
Heparan sulfate / Heparin
Morphogens
120308942 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
120308942
NCBI-ProteinID:
XP_039201601
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MLLLRRTGLLPLCLGALFLSAGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGAS
GRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPG
VKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYESKA
HIHCSVKAENSVAAKSGGCFPGSSWVNLEGGDTKLVKDLRPGDRVLAADVHGQLFYSEFL
AFLDREDPPVHKLFYVIETQTPQTRLLLTAAHLLFVAPPHNHSHSQPQPIFASHVQPGQH
IYVLAQGGQTLLQAAVHSVSLKEESSGAYAPLTAQGTILINQVLASCYAVIEEHSWAHWA
FAPFRIAHAALAVLNPEGLSSPLLFPAAVPEEGSSLAGVHWYSRLLYYIGRWILGSEMMH
PLGMAS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgctactcctccgaagaactgggctcctcccgctctgcctaggcgcgcttttcctctcc
gccgggctggcttgcgggccgggccggggtttcggcaagaggaggcacccgaagaaattg
acccctttagcctacaagcagttcatccccaacgtggccgagaagacgctgggcgccagc
ggcagatacgagggcaagatcagccggaactcggagcgctttaaagagctgacccccaat
tataatccggacattatttttaaggacgaggagaacacgggagccgaccggctgatgacc
cagcgctgcaaggacaagctgaacgcgctggccatctccgtcatgaaccagtggccgggc
gtcaagctgcgcgtcacggagggctgggatgaggacggccaccactctgaggagtcgctg
cactacgagggccgcgcagtggacatcaccacctcggatcgagaccgcagcaagtacggc
atgctggcgcgcctggccgtcgaggccggcttcgactgggtgtactacgagtccaaggcg
cacatccattgctctgtcaaggccgaaaactcggtggctgccaaatcgggtggctgcttc
cctgggtcctcctgggtgaacctggaaggaggagacaccaagctggtgaaagaccttcgc
ccaggtgatcgagtgctggcagcagatgtgcatggacagctcttctacagtgaattccta
gccttcctggaccgagaggaccctcctgtccacaaactcttctacgtgattgagacccaa
acaccccagacccgcctcttgctcactgctgcccacctgctattcgtggccccaccacac
aatcattcccattcccaaccccagcctatctttgccagccatgtgcagcctggacaacat
atctacgtgctggcccaagggggtcagacactgttgcaagcagcagtgcatagtgtgtcc
ctgaaggaggagtcctcgggggcttatgccccactcaccgctcagggcaccattctcatc
aaccaggtgctggcttcctgttatgctgtcattgaggagcacagctgggctcactgggcg
tttgcgcctttccgcattgctcacgcggccttggccgtgctgaatccagagggtctctcc
tctcctctcctctttccagctgctgtacccgaagagggttcctcattggctggagtccac
tggtactcccgcctcctctactacattggccgctggattttgggttctgagatgatgcac
ccattgggcatggccagctga
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