Crotalus tigris (Tiger rattlesnake): 120309169
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Entry
120309169 CDS
T08476
Symbol
TRIM54
Name
(RefSeq) tripartite motif-containing protein 54 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120309169 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctig04121
]
120309169 (TRIM54)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120309169 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_6
Sina_RING
RHH_9
UvrD_C
DUF5799
CagA
DUF1664
Motif
Other DBs
NCBI-GeneID:
120309169
NCBI-ProteinID:
XP_039202047
LinkDB
All DBs
Position
Unknown
AA seq
387 aa
AA seq
DB search
MNFAVGFKPMLGTSQSMDSLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDIFQASNP
LWQSRGSTSVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHAKA
EQQLMCEEHEDEKINIYCLNCEVPTCSMCKVFGAHKDCEVAPLTNIYKRQKGELSDGIAM
LVAGNDRIQAIITQMEEICKTIEDNARRQKQHLGLRFDSLYSILEERKKELLQEIGREQE
EKVQRVRGLIRQYGDHLEVSSKLVESAIQSMEEPQMALYLQQSKELIKKITDMSKVSMSS
RPEPGYENMDHFSINVDHVAEMLRTIEFQTDVSGEETESEGIIPEGGGEAGEEDHPEGSE
APEGAEDGENLSRFRPKPPSVPPRGQH
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgccgtgggcttcaagccgatgctggggacttcacagagcatggatagcctg
gagaagcaacttatctgccccatctgtttggaaatgttcaccaaaccagtggtcatcctg
ccctgccaacacaacctctgtcgcaagtgtgccaacgatatctttcaggcctccaacccc
ctgtggcagtctcgtggatctacttcagtgtcctcaggaggccgattccggtgcccatcc
tgtcggcatgaagtcgtgctggaccggcatggagtttatggcctgcaacgcaaccttttg
gtggagaacataattgatatctacaagcaagaatcctctcggcctctccatgccaaggca
gagcagcagctgatgtgtgaagaacatgaagatgaaaagatcaacatatactgcttgaac
tgtgaggttccaacctgctctatgtgcaaagtctttggagcccataaagactgtgaagtg
gctcctctgaccaacatttataagcgccaaaagggagagttgagtgatggcattgccatg
ttagtggcagggaatgaccgtatccaagccatcatcacccaaatggaagagatctgtaaa
actattgaggataatgctcggcgacagaagcagcatcttggtctgcgctttgactctttg
tacagcatcctggaggaacgcaaaaaagagctgttgcaagaaattggacgagagcaagag
gaaaaagtccaaagggtgcgggggctcatccggcaatatggcgaccaccttgaggtctcc
tctaagctggttgagtcagccatccagtccatggaggaaccccagatggccctctacctg
cagcagtcaaaggagctgatcaaaaagatcacagatatgtccaaggtatccatgagcagc
cgacctgagcctggctatgaaaacatggaccatttctctatcaatgtagatcatgttgct
gaaatgctgagaactattgaatttcagacagatgtttctggggaggaaactgagtctgaa
ggaattattccagaaggaggtggtgaagctggagaggaagaccatccagaaggatcagag
gctcctgaaggagcagaagatggagagaatctgtctcgattcagaccaaagccacctagt
gtaccacctcggggccaacactga
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