Crotalus tigris (Tiger rattlesnake): 120309237
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Entry
120309237 CDS
T08476
Symbol
RNF43
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120309237 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctig04121
]
120309237 (RNF43)
Enzymes [BR:
ctig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120309237 (RNF43)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120309237 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
KIAA1549
Motif
Other DBs
NCBI-GeneID:
120309237
NCBI-ProteinID:
XP_039202210
LinkDB
All DBs
Position
Unknown
AA seq
804 aa
AA seq
DB search
MSVGPQLQLAVLWPWLLMAMLQIRLGYSGLALVAAMEAERTLAQKAIIRVIPFKLEPLTL
EGVFASIAEITPAEGKLLQFHPLSLCNTSEDEHTVPGFVSIVKLERPERDLRPCLSLANK
AKLAGERGARAVLFDITDDQSAADQLRKPQGLSHPVVLIWGHNAELLMRVVNNNREAHVK
IEVKEMPAWPDYDVWILLTVVSTVLVIVIIFIVRTRCQPGRNQTNVQEATIQAINRLAIR
RYQGPYRHAPTGDSVSTCSSPPICAICLEEFCEGQELRIITCSHEFHRQCVDPWLQQHQT
CPLCMFNIVDRIPPTLSRHSREDRHNSGSRQRPHLFRQRPGHALYHFSRTVPQMPPRNCS
SVGSRGHPFFHSPELSQLDFGTMHYLPYRPIGFEPWCGHQAPLSRSLLLSQHHLESPACE
PALASHRLCLLQHQPSCQGLRAPLAAQINHAAPLHRGIRHGRHHHHHSSGSGESYLTEPS
GYLPDGPGSDSSSGPCHGSSSDSMLNCTDISLQAIHGSCSTFHSSLSSDYDPFTFCGSEK
LSTDNKQDSSSSGRDSQLQSVDTMVTSRAQLASNHVHYHHHHHRHHHYGQKPSSCPNGRP
NPESNPRKMKYSRTKVGSQNISVPKRTEKMKMLDLSRQGHTELYLADGSDISMTASNQAG
TIGLWGTQKHHVQIHPGRRRWKCPLETSPEDSSRTLECRIASHPGGLYRNQGSPEIQPLL
VGGPPAHNFAALPEVSKCLTPCFTMEPHEKRDTLKQLDCEHTFPEECSDKDATGSNTSSY
LNNQVLQNLQGSTEDIPNVYEHSV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttggcccccagctacagctggcagtcctctggccttggctgctaatggctatg
ctacagatacgactaggctactcaggactggcactggtggcagcaatggaagccgagcgg
actttggcccagaaggcaataattcgggtaattcctttcaaactggaacccctcacactg
gaaggagtctttgctagcattgcagagatcacccctgctgaaggcaaactgctgcagttc
catcccctgtctttgtgtaataccagcgaggatgaacacacagtcccaggatttgtgtcc
attgtcaaactggaaaggcctgagcgggatctccggccatgcctgtcattggccaataag
gcaaaactggcaggggagaggggagctcgggctgttctgtttgacattacagatgaccag
agtgctgctgaccagttgaggaagcctcaagggctgagtcatcctgttgttctgatctgg
ggccacaatgctgaacttctcatgagagtggtgaacaataaccgtgaagcccatgtgaag
attgaggtgaaggaaatgccagcttggccagactatgatgtttggatactcctcaccgtt
gtcagtacagtactggtcattgttataatcttcattgttcgcactcgttgtcagccaggc
agaaatcagacaaatgtgcaggaagcgaccatacaagcaatcaaccggctggccatacgg
aggtatcaaggcccctatcggcatgctccaacaggggactctgttagcacctgcagttct
cctcctatatgtgcaatttgcttggaagaattttgtgaggggcaggaactacggatcatc
acctgttcccatgagttccatcggcagtgtgtggacccttggctccagcagcaccaaaca
tgtccattatgcatgttcaacattgttgatcggattccccctactttatctaggcattct
cgtgaggaccgacacaattctggatctagacaaaggcctcatttattccgacaacgacca
gggcatgccttgtaccacttctcacgaactgtcccccaaatgcctcccaggaactgctct
tcagtgggctctcgtggccaccctttcttccactctcctgaactctcccagttggatttt
ggaactatgcattacttgccttataggccaattggctttgagccttggtgtggccaccaa
gctcctctcagcagaagcctgttactttcacagcatcatctggagtcaccagcgtgtgag
ccagccctggcctctcataggctgtgtctgcttcaacaccagccatcttgccaaggtctc
agggctccccttgcagctcagataaatcatgctgctcctttacatcgaggaattcgccat
gggaggcatcaccaccaccacagtagtggttctggggaaagttatcttacagaacccagt
ggataccttcctgatggccctggcagtgattccagttcaggtccttgccatggcagttcc
agtgactccatgttgaattgcactgacatcagtcttcaggctatccatggcagttgctct
acttttcatagctccctgagcagtgattatgatccgttcaccttctgtggctcagagaag
ttgagcacagataacaaacaagattcttcttcatctgggagggattcacagcttcagtca
gtagacacaatggtaacaagtagagcacaactagccagtaatcatgtccactatcatcac
catcaccacaggcatcaccattatgggcagaaaccttccagctgtccaaatggcaggcca
aacccagagtctaatccacgcaagatgaaatattccaggacaaaggtgggatcacaaaac
atctcagtaccaaaaaggacagagaaaatgaaaatgctagatctttctaggcaaggacat
actgagctgtatttggcagatgggtctgatattagcatgacagccagtaatcaagctgga
actattggactgtggggtactcagaaacaccatgtgcaaatccatccaggtagaaggaga
tggaagtgtcctcttgagacttcccccgaggactccagcagaaccctggaatgcagaatt
gctagccatcctggtggtttatatagaaaccagggttccccggaaattcaacctctttta
gtaggcggtccccctgcgcataattttgcagcattgccggaggtatcaaaatgcctaact
ccatgttttaccatggagccccacgaaaagagggacacgctgaaacaattggattgtgaa
cacacatttccagaagaatgttcagacaaggatgcaacaggaagcaacacaagctcttac
ctcaataatcaagttctgcaaaaccttcagggatctacagaagatatccccaatgtgtat
gaacattcagtttga
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integrated database retrieval system
