Crotalus tigris (Tiger rattlesnake): 120309308
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Entry
120309308 CDS
T08476
Symbol
LRBA
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120309308 (LRBA)
Membrane trafficking [BR:
ctig04131
]
Endosome - Lysosome transport
Others
Others
120309308 (LRBA)
Endosome - Golgi transport
120309308 (LRBA)
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
120309308 (LRBA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Laminin_G_3
Neurobeachin
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR75_1st
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WDR55
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_1st
SUKH_6
Motif
Other DBs
NCBI-GeneID:
120309308
NCBI-ProteinID:
XP_039202344
LinkDB
All DBs
Position
Unknown
AA seq
2866 aa
AA seq
DB search
MASEERQRSSSPSTGDDKGGGEGGTGQGKDGSSAEKQSLNPGIPIRGIRMKFAVLTGLVE
VGEVSNRDIVETVFNLLVGGHFDLEMNFIIQEGEGITCMLDLLDKCDVTCQAEIWSMFTA
ILKKSIRNLQICTEVGLIEHVLQRIDKADNMIADLLVDMLGILASYSVTVRELKLYFSKL
QGDKGKWPLYAGKLLSVLKYMPHKYGPDAFFNFPGKSAAAIALPPIAKWPYQNGFTFHTW
LRMDPVNNINVDKDKPYLYCFRTSKGLGYSAHFVGGCLVVTSIKSKGKGFQHCVKFDFKP
QKWYMVTIVHIYNRWKNSELRCYVNGELASYGEITWFVNASDTFDKCFLGSSETADANRV
FCGQMTAVYLFSEALNAAQIFAIYQLGLGYKGAFKFKGESDLFLADHHKQLLYDGKLSNA
ISFTYNPRATDAQLCLESSPKDNPSIFVHSPHALMLQDVKAVITHSIQSAMHSIGGVQVL
FPLFAQLDYRQYSLDQPDTTLCSILLAFIMELLKNSVAMQEQMLSCKGFLVIGYSLEKSS
KAHINRTVLDLCLAFAKYLSNLHNGAPLLKQLCDHILLNPVIWIHTPTKVQLMLYTYLST
EFIGIANIYNAIRRVGTVLLAMHTLKYYYWVVNPQDRSGITPKGLDGPRPNQKEILSLRA
CLLMFIKQLVTKDYGVKEDELQGILNYLLTIHEDENLMDVLQLLVALMSEHPSSMIPAFD
QRNGLRVIYKLLASKSEGIRVQALKVMGYFLKHLAPKRKAEIMLGHGLFSLLTERLTLQT
NLISMTTYNVLFEILIEQICTQVMHKQHPDPDSTVKIQNPQFLKVIAVLLRNSPPCSETM
EVHRVFLSDMIKLFNSSRENRRSLLQCSVWQEWMLSLCYFNPQSSDEQKITEMVYAIFRI
LLYHAIKYEWGGWRVWVDTLAITHSKVTFEIHKQNLSRMFREYEEKGDECCTAGPSSIIR
TISGISKETEVTEKLHQLEKKEADTSSVDTDNRSMNNSVLKDESRLSDFEEPSNSETNKE
KTKTENIQRPLDLNGAPSLDLPLQAKITKQSSDCTAEITGINHEEKEICTTDSQSSLENV
ETLENPEMLENVTPEVYVEEDEDFVDLKNETNLALTSEQCVPKSIEDHDLCDSQVTSVIQ
QCTASSKEPVSIEVVPETVEGSVETEQQDGLPEISCPEVNRAQSTSDNENNIDDKNTNQP
QTKTVVDSTQPQTSEAIIASDKKIARLDVSSIASDTERLELKPHANPEVNQPPRAITKKY
LPMDNHQVTSQFLKGGKSQAAAIYAPYVTSRQYDSSDQNVVTPADGQRKDSRSTMFRIPE
FRWSQMHQRLLTDLLFSIETDVQMWRSHSTKTVMDFVNSSDNVIFVHNTIHLVSQVMDNM
IMACGGILPLLSAATSATHELESIEPTQGLSVEASIAFLQRLISLVDVLIFASSLGFTEI
ESEKNMSSGGILRQCLRLVCAVAVRNCLECQQQHKLMKLSGENVKHRKTMQSLIASGRIG
AKSPVDIVTGGISPIRDIDRLLQDMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMV
SKYRDILEPQDERRQFQPTQSPKIDKEEQSEAITILSQEPAKESESVVSPQRTDSGIQEK
AHCGSGHNSEKVTESEKQNISTGPDAISEILCTLSSEVNKSQESKNEVHNEVDGKTASSM
QTAKNVNVKDILRSLVSAPADGAMVDPAVLPPVFLGVLGDGASAQPIQFQSFDRSVVVAP
KKSVSSSSATINVPTNAVSVVSSLDSSQAPDVNGSSPSNGSSDSRLPSVPTLSSVPEDSA
SNMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVV
ELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSQTMKDHLVRVANEADFILSRQRAEDI
HRHAEFESLCAQYSAEKREDEKMCDHLIRAAKYRDHVTATQLIQKIINILMDKHGAWGNS
PPSRPREFWRLDYWEDDLRRRRQFVCNPLGSTHPEATLKAAIDHAPDEDILVKGKQSIRN
QALGNQNSESEILLEVDDDNLSSMEEKELENLTGPVSMCTPAQLVAPCVIVKGTLSITTS
EVYFEVDEEEPSFKKIDPKILAYTDGLHGKWLFSEIRSVFSRRYLLQNTALEIFMANRVA
VMFNFPDPATVKKVINCLPRVGIGTSFGLPQTRRISMATPRQIFKASNMTQRWQHREISN
FEYLMFLNTIAGRTYNDLNQYPVFPWVITNYESEELDLTLPSNFRDLSKPIGALNPKRAA
FFAERYETWEDDQVPKFHYGTHYSTASFALTWLLRIEPFTTFFLNLQGGKFDHADRAFSS
VSRAWRNCQRDTSDIKELVPEFYYLPEMFVNFNNYNLGVMDDGTVVSDVELPPWAKTPEE
FVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRSLNVFYYLTYEGAVNLNSIMDPM
LREAVEAQIRSFGQTPSQVLIEPHPPRSSAMQLYLLLQSPLMFTDQAQQDVIMVLKFPSN
SPVTHVVANTQPGLTNPAVITVTVNRLFAVNKWHNLPARQGAVQDQPYQLPVEIDPLIAS
NTGMHRRQITDLLDQSIQVHSQCFVITSDNRYILVCGFWDKSFRVYSTDTGKLMQVVFGH
WDVVTCLGRSESYIGGNCYILSGSRDATLLLWYWNGKTNSIGDNTNGETAAPRAVLTGHD
YEITCAAICAELGVVISGSKEGPCLIHSMNGDLLRTLEAPENCVKAKLIQASREGHCVIY
YDNGHFCVFSVNGKLHSTMETDDNIRAIQLSRDGQYLLTGGDNGVVMVWQVYDFKQLFAY
PGCDAGIRSMTLSYDQRCIMTGMASGSIVVFYNDFNRWHHEYQTRY
NT seq
8601 nt
NT seq
+upstream
nt +downstream
nt
atggctagtgaagaaagacagaggtcgtcttctccatcaacaggggatgataaaggcgga
ggagaaggtggtactggacaaggaaaagatggaagttcagctgaaaagcagtctttgaat
ccaggcatccctatccggggtatcaggatgaaatttgctgttctgacaggattggtggaa
gttggggaagtatccaacagggatattgtagaaactgtgttcaatctgcttgtaggtggt
cattttgatctggaaatgaattttattatacaagaaggagaaggtattacatgcatgttg
gacttgttggataagtgtgatgtcacttgccaagcagagatatggagcatgtttacagct
atcctgaaaaaaagtatacgaaatctgcagatttgcacagaagtaggtcttattgagcat
gtgcttcagaggattgataaagctgacaacatgattgcagatcttttagttgatatgctt
ggcatattagcaagctacagtgtgacagttcgggaattaaagctatactttagcaaactt
caaggagacaaagggaaatggcctctgtatgctggaaagctactgtctgtattaaaatat
atgccccataaatatgggcctgatgccttcttcaatttcccaggaaaaagtgctgcagct
attgccttacctcctatagcaaagtggccataccagaatggatttacctttcatacttgg
ttaagaatggatcctgtaaataatattaatgtagacaaagataagccttacttatattgt
tttagaacaagtaaagggcttggttattctgctcattttgtgggaggctgtttggttgtg
acatcaattaaatcaaaaggaaaaggtttccagcactgtgtgaaatttgatttcaagcca
caaaagtggtacatggttactattgttcatatctataatcgttggaagaacagtgaactc
agatgttacgtgaatggagaactagcatcatatggagagataacatggtttgtcaatgcc
agtgatacatttgacaaatgtttcctgggctcttcagaaacagcagatgccaatcgagta
ttttgtggccagatgacagctgtttatcttttcagtgaagctctcaatgctgcccagatc
tttgcgatttatcaacttggtctgggatacaaaggagcttttaagttcaaaggagaaagt
gatctgttcctagctgatcatcataaacaattattatatgatgggaaactgtctaatgct
atttcctttacatacaacccaagggctacagatgcacagctctgcctagaatcatcaccc
aaggacaatccttctatctttgtacattcaccacatgccctcatgctacaggatgtgaaa
gcagtcataacccattctatccaaagtgcaatgcattctattggaggagtgcaggtatta
tttcctctgtttgcacagttggactataggcaatattccttggatcagcctgacacaact
ctttgttctattttactggctttcattatggaattgctgaagaactcagtcgctatgcaa
gaacaaatgctttcttgtaagggcttccttgtaataggatacagtcttgaaaagtcttcc
aaagcacacattaacagaactgtcttagacctttgccttgcctttgctaaatatttgagc
aatttgcataatggagcccccttgctgaagcagctctgtgatcatattctacttaatcct
gtaatatggattcatactccaaccaaggttcaattgatgttgtacacttacttgtctact
gagttcattggcatagcaaatatatataatgcaattagacgagttggtacagttctattg
gcaatgcataccttgaagtattactattgggtagttaatcctcaagaccgtagtggaatt
actcccaaaggtttagatggacctcggcctaatcagaaagaaattctttctctgcgagcc
tgtttactgatgtttattaagcagttggtgacaaaggactatggagtgaaagaagatgaa
ctccagggcattctgaattatcttcttaccattcatgaggatgaaaatttaatggatgtt
ttgcaattgcttgttgctctcatgtctgagcaccccagttctatgattcctgcttttgat
cagaggaatggattgcgtgttatctacaagcttcttgcttccaaaagtgaagggatcaga
gtacaagcactgaaggtgatgggctactttttaaagcatctggcacccaagaggaaagca
gaaattatgcttggacatggactgttttctcttctgactgagaggcttacgcttcaaaca
aacttaatttctatgactacctacaatgtactttttgagatacttattgagcagatttgt
acacaagtgatgcataaacagcatcctgacccagattcaacagtgaaaatacaaaatccc
cagtttctgaaagttattgctgttttgctgcgtaattctcctccatgctcagaaaccatg
gaagtccaccgagtcttcctatcagacatgattaagctttttaatagcagcagggaaaat
aggaggagtttactacagtgttctgtatggcaggaatggatgctttccctttgctatttt
aatccccaaagctctgatgaacagaagataacagaaatggtgtatgccatttttagaata
ctactttatcatgcaatcaagtatgaatggggtggctggcgtgtttgggtggatactcta
gcaattacacattcaaaggtaacttttgaaatacataaacagaacctttctcggatgttc
agggaatatgaagagaaaggagacgaatgctgcactgctggtccatcatccattattaga
acaatttcaggtattagtaaagaaactgaagttacagagaagctccatcaacttgaaaaa
aaagaagctgacacttcttcagttgatactgacaacagaagcatgaacaatagtgttttg
aaagatgaaagtagattatctgattttgaagaacccagtaattcagaaacaaacaaagaa
aaaaccaaaacagaaaatattcagagacctcttgatttaaatggagcacctagtttagat
cttcccctacaagccaaaattacaaaacagagctcagactgtactgctgaaattactgga
ataaaccatgaagaaaaagaaatatgtaccactgattcacaatcatctttagaaaatgtt
gaaacactagaaaatccagaaatgttagaaaatgtaacaccagaagtatatgtggaggag
gatgaagattttgttgatttaaaaaacgagactaatctggcacttacatcagaacaatgt
gttccaaaatccattgaggatcatgatttgtgcgatagccaggtaacctcagttatacag
cagtgcactgcttcttcaaaagaacctgtttcaatagaagtagttcctgaaactgttgaa
ggatcagtggaaacagaacagcaggatggcttgccagaaatcagttgtcctgaagtaaac
agagctcagtcaacttcagacaatgagaataacattgatgacaaaaatactaatcaaccc
caaaccaagacagttgtagatagcacacaaccacagacttcagaagctataattgcttca
gataagaaaattgccagacttgatgtttccagcattgcatcagatactgaaagattagaa
ttaaaaccccatgcaaatccagaagtaaatcaacctcctagagccattactaagaaatac
cttccaatggataatcatcaagttacatcacagttcctcaaaggaggaaaatcacaggca
gcagcaatatatgcaccctatgtgacatctaggcagtatgattcatcagatcaaaatgta
gtaactcctgcagatggacagaggaaggattctagatctaccatgttccgtattcctgaa
tttcgatggtctcaaatgcatcagcgcttgcttacagatctcctcttttcaatagaaaca
gatgtacagatgtggagaagtcattctaccaagactgtgatggacttcgtgaacagcagt
gataatgtcatctttgtacataacacgattcatcttgtctctcaagtgatggacaatatg
attatggcttgtggtggcatattacctttgctttcagctgctacatctgctacgcatgaa
ttggaaagcattgagccaactcaaggattatcagtggaagcttccatagcattccttcaa
agattaattagccttgtggatgtactgatctttgcaagttctcttggatttactgaaatt
gagtcagagaaaaatatgtcatctggtggaattttaaggcaatgtcttcgacttgtttgt
gcggtagccgtcagaaattgtttggaatgtcagcaacagcataagttaatgaagcttagt
ggagaaaatgttaaacatcggaaaacaatgcaaagccttatagcctcaggaagaattgga
gcaaagagtccagttgatattgtaactggagggatttctccaataagagacattgacaga
cttctacaggatatggatattaatcggctccgtgcagtggtattcagagatatagaggac
agtaagcaagcacagttcttggctttggctgtagtgtattttatctctgtactcatggta
tcaaaatacagagatatcttggaacctcaagatgaacggaggcaatttcaacctactcag
tcacccaaaatagataaggaagaacaatctgaagctattaccattttaagtcaggaacct
gccaaggagtcagaaagtgtggtgtctccacaaagaacggattcgggaattcaggagaaa
gcacattgtggatcaggacacaattctgagaaggttactgaatcagaaaaacagaatata
agtacaggtccagatgcaataagtgaaatattatgtactctttcttcagaagttaataaa
tctcaagaaagtaaaaatgaagtacataatgaggtagatggtaaaactgcatcctctatg
caaactgcaaaaaatgtcaatgtaaaagacatcctaagaagtttggtcagtgctcctgca
gatggggccatggtggaccctgctgttcttccacctgtttttcttggagtccttggtgat
ggtgcctctgcacaaccaatacaatttcaatcttttgacaggagtgtggttgtggcccca
aagaagtcagtgagttcatcttcagccacaattaacgtgcctacaaatgctgttagtgtg
gtttcttctttggattcttctcaagccccagatgtaaatggaagctctccaagtaatgga
tcatcagattcaagattaccatctgttcctacactttcttctgtgcctgaggattctgct
tcaaacatgagtatttcagagaggcttgagcatgctttggaaaaagctgcccctcttctg
agggagatatttgtggactttgctccttttctttcgcgtaccctcttgggtagtcacggt
caagaactactgatagaaggtacaagtcttgtatgtatgaaatctagcagttcagttgtg
gaattggtcatgctgctttgttctcaggaatggcagaactcaatacagaagaatgcaggc
ctagctttcattgaacttgtcaatgaaggaaggttgctaagtcaaacaatgaaggatcat
ttagtgagggtagcaaatgaagcagattttatcttgagtaggcagagagcggaagatatt
cacaggcatgctgaatttgagtcattgtgtgcccagtattctgcagaaaaacgtgaagat
gaaaagatgtgtgatcatttgataagggcagccaaatatcgtgatcatgtgacagcaact
caactgatacagaaaatcatcaatatactgatggacaagcatggagcctggggcaattct
ccaccaagtcgtcctcgtgagttctggcgccttgactactgggaagatgacttgcggcgc
cggcgacaatttgtgtgtaacccccttggatcgacacatcctgaagcgaccttaaaagct
gccatagaccacgctccagatgaagatatacttgttaaaggaaagcagtctatcaggaat
caggctttaggaaatcagaattcagaaagcgagattctcctggaagtcgatgatgataat
ttgtcatccatggaggagaaagaacttgagaatttaactggtcctgttagtatgtgtaca
ccagctcagctcgtggccccttgtgtaatagtgaaaggcactctgtccatcaccacctct
gaagtgtattttgaggtagatgaagaagagcccagttttaagaaaattgatcccaagata
cttgcatatacggatggactgcatgggaaatggctgttttcagagattcgatcagtattt
tctcgacgctatctattgcagaatacagcattggaaatctttatggctaacagagttgct
gtcatgttcaactttccggatcctgcaactgtaaaaaaagtaatcaattgtttacctcgt
gttggaattggaactagtttcggtttgcctcaaaccagacgtatttctatggccactcca
cgtcaaatctttaaagcttcaaatatgactcagcgatggcaacatagagagatttcaaac
tttgaatatcttatgtttcttaataccattgcagggcgtacatacaatgatttaaaccag
tatccagtatttccttgggtgatcactaactatgaatcagaagagttggaccttacactt
ccaagtaatttccgagatttgtcaaagcctattggtgctcttaatcccaaacgagctgca
ttctttgccgaacgctatgaaacatgggaagatgatcaagttccaaagtttcattatggc
actcattattcaacagccagttttgcactcacttggttgttaagaattgagccttttaca
acatttttcctaaacttgcaaggtgggaagtttgatcatgcagatagagctttctcatca
gtttcaagggcatggcgcaattgtcaacgtgacacatctgatatcaaggagcttgttcct
gaattttattatctacctgagatgtttgtcaatttcaataattacaatcttggagtgatg
gatgatggaacagtggtctctgatgttgaacttccaccatgggccaaaaccccagaagaa
tttgttcgcataaatagactggctttggaaagtgaatttgtttcctgtcaactgcaccag
tggattgatttgatttttggctataagcagcaagggccggaagctgtcagatctctaaat
gttttctactatctaacctatgaaggagctgtcaatctcaattcaataatggatccaatg
ttgagagaggcagtggaagctcagatccgaagttttggacagactccttcccaagtgctt
atagaaccacatcctccaagaagttctgctatgcagctgtatctccttctccagagtcca
ttgatgttcacagaccaagcacaacaggatgtcatcatggtcctaaaatttccatccaac
tctcctgtaacacatgtagtagccaacactcagcctggtttgacaaatcctgctgtgatt
actgtcactgtcaaccgactgtttgctgtgaataagtggcacaatcttcctgctcgtcaa
ggtgctgtacaggaccagccataccagctgccagtggaaatcgatcctctcatagctagc
aatacaggtatgcacagaaggcaaatcacagatcttctggaccaaagtattcaagtccat
tcccagtgctttgttatcacttcagataatcgctatatcctggtctgtggattttgggat
aaaagttttcgggtgtattctactgatacaggaaaactaatgcaagttgtgtttggacat
tgggatgttgttacttgccttggccgctctgaatcttatattggaggaaactgttatatt
ctatccgggtctcgtgatgcaacactgctgctatggtactggaatggtaaaaccaatagc
attggtgataacacaaatggtgaaactgctgctcctcgggcagtcttgactggacatgat
tatgagattacctgtgcagcaatttgtgctgaacttggtgtagtgataagtggttctaaa
gaaggaccatgtctcatacattctatgaatggtgatctactgaggacattagaagctcct
gaaaactgtgtgaaagcaaaacttatccaagcatcaagggagggtcattgtgttatatac
tatgacaatggtcatttttgtgtattcagcgtgaatggaaaactccactccactatggaa
acagatgataatatcagggcaatccagctgagccgtgatgggcagtatctcctcacagga
ggagacaatggagttgttatggtttggcaagtgtatgacttcaagcagctttttgcctat
cctggttgtgatgctggaatccgatccatgactctttcatatgaccaaaggtgtataatg
acaggcatggcttctggcagcatagtagttttctacaatgatttcaacaggtggcatcat
gaataccaaaccagatactga
DBGET
integrated database retrieval system
