KEGG   Crotalus tigris (Tiger rattlesnake): 120309562
Entry
120309562         CDS       T08476                                 
Symbol
TDP1
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120309562 (TDP1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ctig03400]
    120309562 (TDP1)
DNA repair and recombination proteins [BR:ctig03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     120309562 (TDP1)
SSDB
Motif
Pfam: Tyr-DNA_phospho
Other DBs
NCBI-GeneID: 120309562
NCBI-ProteinID: XP_039202859
LinkDB
Position
Unknown
AA seq 594 aa
MSQESQHGKWTLSSSEDSMDELVDSEKPSTSVVQRGQESKESSHSCSEARKVALKRKMSP
LKYVAGNLPQEEASDQKFAQEDFGWCLSSSEDEDLKASSGNRDAISTVRKAESSTSMELP
KTCKISSSCKSAVPSEVQDTWDLLNGQNPFRFFLTKVKGIKSKYNSGALHIKDILSPLFG
TLVSSAQFNYCIDVEWLVQQYPKEFRDKPLLIVHGEKRESKAELHEDAHPYKNVRLCQAK
LDIAFGTHHTKMMLLNYEEGLRVVIHTSNLIDDDWYQKTQGIWLSPLYPRLPPGSAESDG
ESHTNFKSDLISYLVSYNSATLMEWVEIIKQHDLSETRVYLIGSTPGRYQGNAKEKWGHL
KLRKLLKEHAVQIPDQDLWPIIGQFSSIGSMGIDQSKWLCSEFRESLGSLGSNLKTPSNE
IPIHLIYPSVENVRQSLEGYPAGGSLPYSIQTAQKQLWLNSYFHKWSAETSGRSHAMPHI
KTYMRVSLDFQKIAWFLVTSANLSKAAWGAFEKNGTQLMIRSYELGVLFLPSEFDLNTGY
FQVKENMLSNTSVLSFPVPYDLPPEKYEKKDRPWIWNIPYIKAPDTHGNMWVPK
NT seq 1785 nt   +upstreamnt  +downstreamnt
atgtctcaggaaagtcagcatgggaaatggacattgtccagtagtgaagacagtatggat
gagttagttgattctgagaagccttctacctctgtggtgcagagaggtcaggaaagtaaa
gagagtagtcactcttgctcggaggcaaggaaagttgctctcaagagaaaaatgtctcct
ctgaaatatgtagctggaaatcttccacaggaggaggcctcagatcagaaatttgcacag
gaagactttggctggtgtctttcaagtagtgaagatgaggatcttaaagcctcgagtgga
aatagagatgcaataagtacagtcagaaaagcagagagtagtacatccatggagctgcca
aaaacgtgtaagatttcatcaagttgcaagtctgcagtcccatctgaagtgcaggataca
tgggatctgttgaatgggcagaaccccttcagattcttcctcactaaagtcaaaggaatt
aagtcaaaatacaattctggagcccttcatataaaagatattttatctcctctttttggg
actcttgtatcttctgctcagtttaattattgtatagatgtggaatggctggtccagcaa
tatccaaaggaattcagggacaaacctttattaatagtccatggagagaagcgagaatcc
aaggctgagctacatgaagatgctcacccatataaaaatgttcgtttatgccaggcaaaa
ttggatattgcctttggaacccaccacacgaaaatgatgctgttgaattatgaagaaggt
cttcgagtggtgatacacacatccaatcttattgatgatgattggtaccagaaaacacaa
ggaatatggctaagtcctttgtatccaagattgcctcctgggagtgctgagtctgatggt
gaatctcatacaaattttaagtcagatctaataagctatctggtatcttataattctgct
actctgatggaatgggttgaaataattaagcaacatgatctttcggagacaagagtatat
cttattgggtcaactccaggtcgataccaaggtaatgcaaaagaaaaatggggtcatctt
aaactgagaaagcttctgaaggaacatgcagtacaaatacctgatcaagatctttggccg
ataataggacagttctcaagtattggatcaatgggaattgatcagtccaaatggctgtgt
tcagaatttagagaaagtttggggagtttaggaagcaatttgaagactccttcaaatgaa
attccgatccatctgatttacccaagtgttgaaaatgtgagacaaagtttagaaggttat
ccagctgggggttctcttccatatagtatacaaactgcacaaaagcagctttggctaaac
tcttatttccacaaatggtcagctgaaacttcaggtcgtagtcatgcaatgccacatatt
aaaacttacatgagagtatccttggatttccagaagattgcatggtttctagtgacaagt
gccaatctttctaaagctgcttggggagcttttgagaaaaatggcacccagctgatgatc
cgatcatatgaactaggagttttgttcctgccttcagaatttgacttgaatacagggtat
ttccaagtaaaggaaaacatgttgtctaatacatcagtattgtcatttcctgtcccttat
gatctgccccctgagaagtatgaaaaaaaagatcgcccatggatttggaatattccttac
atcaaagctcctgatacacatggtaatatgtgggttcctaagtga

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