Crotalus tigris (Tiger rattlesnake): 120309671
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Entry
120309671 CDS
T08476
Symbol
POLR2D
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03020
RNA polymerase
ctig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120309671 (POLR2D)
09124 Replication and repair
03420 Nucleotide excision repair
120309671 (POLR2D)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120309671 (POLR2D)
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120309671 (POLR2D)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
120309671 (POLR2D)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
120309671 (POLR2D)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb4
RPN11_C
Tfb4
Maelstrom
Motif
Other DBs
NCBI-GeneID:
120309671
NCBI-ProteinID:
XP_039203080
LinkDB
All DBs
Position
Unknown
AA seq
163 aa
AA seq
DB search
MFLLDFRISGPLRVFRGPDETMAVGGSDIRAVDVEEDASQLVFPKEFETAETLLNSEVHM
LLEHRKQQNESVEDEQELSELFMKTLNYTGRFSRFKNRETIASVRSLLLQKKLHKFELAC
LANLGPETAEEAKALIPSLEGRFEDEELQQILDDIQTKRSFQY
NT seq
492 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgctcgattttcgtatttccggcccgctgcgcgtgttccgagggccggatgaa
acgatggcggtaggtggtagtgacattcgcgccgtagatgtggaagaggatgcatctcag
cttgtttttcccaaggaatttgaaactgctgaaactcttttaaattcagaagtgcacatg
cttctggaacatcggaaacagcagaatgagagtgtggaagacgaacaagaactttctgaa
ctatttatgaaaactttgaattatacaggtcgcttcagccgctttaaaaaccgggagaca
attgctagtgtccgcagcttattgctccagaagaaactccataaatttgaactagcatgt
ttagctaatctgggtcctgaaacagctgaagaagccaaagctttaattcccagcttagag
ggtcggtttgaagatgaagagttgcagcaaattcttgatgacattcagaccaaacgaagc
tttcaatattaa
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