Crotalus tigris (Tiger rattlesnake): 120309730
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Entry
120309730 CDS
T08476
Name
(RefSeq) protocadherin-8-like isoform X1
KO
K16499
protocadherin delta 2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120309730
Cell adhesion molecules [BR:
ctig04515
]
Cadherins
Protocadherins
120309730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Sde0182_C
Motif
Other DBs
NCBI-GeneID:
120309730
NCBI-ProteinID:
XP_039203190
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MARLSILPLVFLQAFFLRGAESQIRFSVDEEAPPSTVLGTLAEEPQRAASALEAAARGFR
LVKAPGNGSLVRVRERDGQLSLGSERLDREQLCGDGGGGPAEAPCLLAFDVLSLGGPAGA
PAPSRLLHVELEVRDLNDHAPRFPQPLVALEVSESAAPGTRLPLPLAHDPDAGSNGLQSF
ALSPGSPFGLEARSRADGLRCAELVLLRGLDREAQAGYRLELVAADGGSPPRSGTATLSV
RVLDANDNAPAFPRGALLTLELPEDAPPGAPLLELAAADADEGANGQLLYAWGSQVGAEA
RRLFSLDPLSGRLALRAPVDHERQRAYELDVQVSDRGASPLSASCKVLVRLLDVNDNAPE
VAISALASGGGGGGNGGAEQAARAGPAVASVSEAAAAQSLVALVSTSDSDAGANGQVRCA
LLAAPHQPFALQRAYDAASYLVLTTGPLDRERVAEYNLTLVAEDLGSPPAKTVRSLTVRV
ADENDNAPRFSEARYEVALPENNPPGAYLTTVEASDPDLGPNGQVTYRLLGTSAPSNLFW
VDPHLGVVRALCSLDREDQAEEEEASSWHEVVVEACDSGSPSLCGRTLVVIVVEDQNDNP
PQLVYPPLVNGLADLPLPLGAPPGFLIAQLAARDADDGRNSELSFSLLEGPPRLFAVHPL
TGELFLRERVPHEATLGSTFHVVVAVKDGGQPALTCSATLRLICTETLPSSRPMVALQFG
VAGEEPWDASVLWIALLGGGCGVLLVAILLVGASIWAGRKKFPLGKASKTVGRRRGGGSN
PVSQRGNGISKDTAGSGAFSRAEEGSGDSLGVIETETPTCDSQAQILIPVEAASEWEASQ
PASNFSYSGLDHVSAQDSGKGDNECNDSDFNTCSDGTKQTSLENVGKQNGATTSAERTTC
KESDIYNGPHAHLSLGRKHLPSYQERAGLLSCPTALINRPLIQLRNTHCHPEFLPQSQDY
LPVRHERLSQVL
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggccaggctctcgattcttcccctggtcttcctccaggctttctttctccgcggggct
gagagccagattcggttcagcgtggacgaggaggctcccccaagcaccgtgctgggcact
ttggccgaggaaccgcaacgggccgcttccgccctggaggctgcggcccgcggcttccgg
ctggtgaaggcgccgggcaacgggtccctggtgcgggtgcgcgagcgggacgggcagctc
agcctgggctcggagcggctggaccgggagcagctgtgcggcgacggcggcggggggccg
gcggaggcgccctgcctgctggccttcgacgtgctgagcctgggcggtccggcgggggcc
ccggcgccctcccgcctgctgcacgtggagctggaggtgcgggacctcaacgaccacgcg
ccacgcttcccgcagccgctggtggccctggaggtgtcggagagcgcggcgcccggcacc
cgcctgccgctgcccctggcgcacgacccggacgccggctccaacgggctgcagagcttc
gccctctcgcccggcagccccttcggcctggaggcgcggagccgggccgacgggctgcgc
tgcgccgagctggtgctgctgcgcgggctggaccgggaggcgcaggcgggctaccggctg
gagctggtggcggccgacggcgggagcccgccgcgctcgggcacggccacgctcagcgtg
cgcgtgctggacgccaacgacaacgcgcccgccttcccccggggcgcgctcctgaccctg
gagctgcccgaggacgcgccgccgggcgcgccgctgctggagctggccgcggccgacgcc
gacgagggcgccaacgggcagctgctctacgcctggggcagccaggtgggcgccgaggcg
cgccgcctcttcagcctcgacccgctctccggccggctggccctgcgcgcccccgtcgac
cacgagcggcagcgcgcctacgagctggacgtgcaggtcagcgaccgcggcgccagcccg
ctctccgccagctgcaaggtgctggtccgcctgctggacgtcaacgacaacgcgcccgag
gtggccatcagcgccctggcgtccggcggtggcggcggtggcaacggcggcgcggagcag
gcggcgcgggccgggccggcggtggcgtcggtgagcgaggcggcggccgcgcagagcctg
gtggcgctggtcagcacctcggacagcgacgcgggggccaacggccaggtgcgctgcgcc
ctgctggccgcgccccaccagcccttcgccctgcagcgcgcctacgacgctgccagctac
ctggtgctgaccaccgggcccctggaccgcgagcgggtggccgagtacaacctcacactg
gtcgccgaggacctgggctcgcccccggccaagacggtgcgctcgctcacggtgcgggtg
gccgacgagaacgacaacgccccgcgcttctctgaggcccgctacgaggtggccctgccg
gagaacaaccccccgggggcctacctgaccaccgtggaggcttctgaccccgacttggga
cccaacggacaggtgacctaccggctgttgggaacgtccgccccgtcgaacctgttctgg
gtggatccccacctgggcgtcgtgcgagctctgtgctccctggaccgtgaggaccaggcg
gaagaagaagaagcgtcgtcgtggcacgaagtggtggtggaagcttgcgacagtgggagc
ccatcgctgtgcggacgcaccctggttgttatcgtggtggaggatcagaatgacaaccca
ccccaactcgtctacccgcctttggtcaacggcttggcagatctcccgttgcctctcggt
gccccacccgggttcttgatcgctcaactggcagcccgggatgccgacgatggtcgtaac
tccgagctgtctttctccctcctggagggtcctcccaggctcttcgcggtgcaccctctg
accggagagctctttctgcgggaacgggtgccccacgaggccacgctgggctctactttc
cacgtggtcgttgccgtcaaggatggtggccagcctgctctgacttgctctgccacctta
cgtctgatttgcacggagacgctgccctctagcaggccaatggtggcgttgcagtttggc
gttgctggagaagagccgtgggacgcatcggtgctgtggatcgccctgctaggtggcggg
tgtggggttttgctggtagccatactcctcgtgggagcctccatttgggcaggcaggaag
aagttcccacttgggaaggcatccaagactgtgggacgcagaagaggaggaggaagtaat
cctgtctctcaacgcgggaacgggatctccaaagatactgctgggagtggtgccttctca
cgagctgaagaagggagcggggactctttgggggtgattgagaccgaaacacccacctgt
gactctcaggctcagattctaattcctgttgaggctgcatctgaatgggaggcaagtcaa
ccagcttccaattttagttattcgggtctggatcacgtgagcgcacaggatagtgggaaa
ggagacaacgaatgcaacgacagcgacttcaatacttgcagtgatggaacaaaacagacc
tccctagaaaacgtcgggaaacagaatggagccaccacttctgctgagagaacaacctgc
aaagaatcagacatctacaatggtccgcatgcccacctatctttggggaggaaacatcta
ccatcttaccaggaacgtgcaggtcttctctcctgtcccacagccctgattaatagacct
cttatccagctgagaaacactcattgtcatcccgagttcctcccccaaagtcaagactat
cttccagttcggcatgaaagactatcccaagttctgtga
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