KEGG   Crotalus tigris (Tiger rattlesnake): 120309894
Entry
120309894         CDS       T08476                                 
Symbol
XPO1
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03008  Ribosome biogenesis in eukaryotes
ctig03013  Nucleocytoplasmic transport
ctig03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120309894 (XPO1)
   03008 Ribosome biogenesis in eukaryotes
    120309894 (XPO1)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120309894 (XPO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ctig03019]
    120309894 (XPO1)
   03009 Ribosome biogenesis [BR:ctig03009]
    120309894 (XPO1)
   03016 Transfer RNA biogenesis [BR:ctig03016]
    120309894 (XPO1)
   03036 Chromosome and associated proteins [BR:ctig03036]
    120309894 (XPO1)
Messenger RNA biogenesis [BR:ctig03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     120309894 (XPO1)
Ribosome biogenesis [BR:ctig03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    120309894 (XPO1)
  Pre-60S particles
    120309894 (XPO1)
Transfer RNA biogenesis [BR:ctig03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    120309894 (XPO1)
Chromosome and associated proteins [BR:ctig03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     120309894 (XPO1)
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd mTOR_dom BID BspA_v Hydrolase_3
Other DBs
NCBI-GeneID: 120309894
NCBI-ProteinID: XP_039203505
LinkDB
Position
Unknown
AA seq 1071 aa
MPAIMTMLADHAARQLLDFNQKLDINLLDNVVNCLYHGEGAQQRMAQEVLTHLKEHPDAW
TRVDTILEFSQNMNTKYYGLQILENVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPSCV
EKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMVILKLLSEEVFD
FSSGQITQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLIYKFLNVPMFRNVSLKCLTEIAGVSVSQYEEQFVTLFTLTMMQLKQMLPL
NTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRLNLRETLMEALHYMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSASPLLSGTQHFDVPPRRQLYLPVLSKVRLLM
VSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMTEKL
HNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAII
ASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRRHFV
QVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQTVQEHLIEKYMLL
PNQVWDSIIQQATKNVDILKDSETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDMLNV
YKCLSENISAAIQANGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVAENFVPPL
LDAVLIDYQRTVPAAREPEVLSTMAIIVNKLGGHITAEIPQIFDAVFECTLNMINKDFEE
YPEHRTNFFLLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYTL
LQNVAQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILAYMFNLVEEGKINT
PLNPGNPVNNQMFIQEYVANLLKSAFPHLQDAQVKLFVTGLFSLNQDIPAFKEHLRDFLV
QIKEFAGEDTSDLFLEERETALRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3216 nt   +upstreamnt  +downstreamnt
atgccagcaattatgacaatgttagcagaccatgcagcacggcagctgctggatttcaac
cagaagttggatataaatctgttggataatgtggtgaactgcctgtatcatggagaagga
gctcagcaaaggatggcacaggaggtcttgactcacttaaaggaacaccctgatgcatgg
acaagagttgatactattttggaattctctcagaatatgaacaccaaatattatggcctg
cagatcttggaaaatgtgataaaaacaaggtggaagatccttccaagaaaccaatgtgaa
ggtatcaaaaaatacgttgttggcttaattatcaagacctcctctgatccatcgtgtgtt
gaaaaagagaaagtatacattgggaaattgaacatgattcttgttcagatactaaaacaa
gaatggccaaaacattggccaacattcatcagtgatattgttggggccagcagaacaagt
gaaagcctttgccagaacaacatggtcatcctgaagctattgagtgaagaggtttttgat
ttttccagtggacagataactcaagtgaaagccaaacatttaaaggacagcatgtgcaat
gaattctcccagatatttcagctatgtcagtttgtgatggagaactctcaaaatgctcct
cttgttcatgcaacattggaaactttacttcgatttctcaactggattccactgggctat
atttttgagaccaaattgatcagtacattaatatacaaatttttaaatgttcctatgttc
cgaaatgtttcattgaagtgcctgacagaaattgctggtgtcagtgtgagtcagtatgag
gaacaatttgtcacactttttactttaaccatgatgcagttgaaacagatgcttcctttg
aacaccaatattcgactagcatattccaatggaaaagatgatgaacagaatttcattcag
aacctcagcttgtttctttgtacctttttaaaagagcatggccaacttatagaaaaacgt
ttaaatctgagagaaacgttaatggaagctctccattacatgttgctggtatctgaagtt
gaagaaactgaaatcttcaagatttgtctggagtattggaatcatctggctgctgaatta
tatagggagagtccattttcaacatcagcttctccattgctatcaggcactcagcatttt
gatgttcctcccaggagacaactttatttgcctgtcctgtctaaggtgcgattattgatg
gttagccgcatggcaaaaccagaagaagtacttgttgtagaaaatgatcaaggagaagtt
gttcgagaatttatgaaagatacagactctatcaacttgtataagaacatgagagaaaca
ctggtttatcttacccatctggattatgcagatactgaacgaataatgacagagaagctt
cacaatcaagtaaatggtactgaatggtcatggaaaaatctcaacaccctgtgttgggct
ataggttcaataagtggagcaatgcatgaagaagatgagaagaggtttcttgtaacagta
ataaaggatcttcttggactctgtgaacaaaaaagaggaaaagataataaagctattatt
gcatcaaatataatgtacatagtaggacaatatccaagatttttgagagcccactggaaa
tttctgaagactgtcgtcaacaagctatttgaatttatgcatgaaactcatgatggagtc
caggacatggcttgtgatacttttataaaaatagcgcaaaaatgtcgaaggcactttgtt
caagttcaagttggagaagtaatgccattcattgatgagatcctgaacaatattaacaca
attatttgtgatcttcagccgcaacaggtacatactttttatgaagcagttggatacatg
attggtgctcagactgaccagacagtacaagagcatttaatagagaaatatatgttactc
cctaatcaagtatgggacagcataattcaacaagctacaaaaaatgttgatattcttaaa
gactctgaaacagttaagcagttgggaagtatcctaaaaactaatgtgagagcatgtaaa
gcggttggacatccatttgtgattcagcttggaagaatctacttagatatgctgaatgtg
tataagtgcctaagtgaaaacatttctgcagctattcaagcaaatggtgaaatggtaaca
aagcaacctctgattagaagtatgagaacagtaaaaagggaaactttaaaactcatttct
ggttgggtgagcagatctaatgatcctcagatggtagctgaaaactttgttccacctttg
ctggatgccgttcttattgattatcagaggactgttccagctgccagagagccagaagtg
cttagtacaatggctatcatagtaaacaaattgggggggcacattactgctgaaatacct
cagatatttgatgctgtctttgaatgcacattgaatatgattaataaggactttgaagag
tatcctgaacacagaacaaacttttttttattactacaagcagtaaactcccattgcttt
ccagcgttcctggccattccacctgcacagttcaagctagtattggattctatcatttgg
gctttcaagcatacaatgagaaatgttgcagatacaggccttcagatcctttatacactt
ttacaaaatgttgcacaagaagaagctgctgctcagagcttttatcaaacttatttctgt
gacattcttcaacacattttttctgttgtaacagacacatctcatactgctggtttgacg
atgcatgcatcaattcttgcatacatgttcaacttagtagaagaaggaaaaataaatact
cccctaaaccctggaaatccagtaaacaaccaaatgtttattcaggagtatgttgctaat
cttcttaaatctgcatttcctcatctacaagatgcacaggttaaactgtttgtaacagga
ctcttcagtttaaatcaggatattcctgctttcaaggaacatcttagggacttcctagta
caaataaaggaatttgcaggtgaagacacatctgacttgttcctggaagaaagagagaca
gctcttcgacaggctcaggaggaaaaacacaaacttcagatgtctgtccctggcatcctt
aatccacatgaaattcctgaggaaatgtgtgattaa

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