Crotalus tigris (Tiger rattlesnake): 120310025
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Entry
120310025 CDS
T08476
Symbol
DCHS1
Name
(RefSeq) protocadherin-16
KO
K16507
protocadherin-16/23
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120310025 (DCHS1)
Cell adhesion molecules [BR:
ctig04515
]
Cadherins
Cadherin related
120310025 (DCHS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
RET_CLD1
Cadherin_2
Fibulin_C
Cadherin_pro
PepSY
Cadherin_4
DUF2808
CADH_Y-type_LIR
Motif
Other DBs
NCBI-GeneID:
120310025
NCBI-ProteinID:
XP_039203848
LinkDB
All DBs
Position
Unknown
AA seq
3233 aa
AA seq
DB search
MGPLPLVLLLLLPLLGGRCTALPGTLDLQVDEEMPAGTIIGDISAGLPTGTTSYMYFISA
QEGSGVATDLEIDENSGIIKTAGVLDHESRDHYSFIAVTPDGATVEVNIQVNDINDHAPT
FPKQQAALLIPERTHTGSRFPLDPAFDADSDLLGTQGYAIKAGNVGQAFQLETRRGPNGV
LHPELVVSSILDREARSTFTLLLEAYDGGSPPRSSQMTLEVSVQDINDNAPAFNQSRYHT
LIPENLLPGSSILQVFAWDADEGDNGAVVYEINRRQSDPEQFFTIDASTGVIKLNKGLDY
ELRKVHELVVQARDKAIHPEVSTAFVTIQVRDYNDNQPTMTIIFLSEDGSPRISEGAQPG
QFVARISVSDPDYGEYANVNVSLEGGEGKFALTTKDNIIYLICVDQMLDREERDSYELRV
TATDAGTPPLRAESAFVLQVMDINDNPPLFDVQEYEQSVPEVVYPGSFVLQVTARDKDQG
PNGEIRYSILHNHHSHSHWFAIDPATGIVTTASALDYETDPQPRLTVLATDRGKPPLSST
TVVLVTLQDVNDNEPVFESNFYNISVKENVSPGTCFLQIMATDADSGSLGSVSYALGTGL
GSLGPSAFLLGEETGQLCTAQGLDRDEGPSTYDFTVTAIDGGGLSSTAYVKVFLEDVNDN
APAFYPLEYAASISTQSQPGSAVLRVTAQDKDEGLHGRVTYRIANGNMLTVFAINPDTGV
ISLRRPLTGKANLLVQLEVEAEDGGGLAAQPTAQINISIVAGTVSPPSFERAQYYFTVPE
NTRPGSSVGSIHAHNAPGQTDSVFYSISAGDPQGHFSIDPSSGQLHTNLALDHEAQSILT
LEVQARSGSPPAYSSARVQITVSDINDNPPHFPLSSDSVSLPEGAALGTIVYTVQAEDPD
SGANGQVHFELASRGMAAFGVERLSGKVRLMGALPQESLSPYKLLILAQDGGTPRLSATF
TLLVHMQAEDQLGPLFDTLTYRVEVREGVPVGTHFLQVRALAQEHNALLAYHLRADGDAT
SFGIAPDTGWLHVRRTLDREVQELYVLTVLAVAGEGEGRQTGTSTVRVTVTDENDNSPRL
SEERYFFTVVENRPAGSSVGRVIATDLDAGSNSRLTFRLVPHEGHFLIHTQTGELSIRKS
LDREQQSSYQLQVVVQDGGTPPRSTTGTIYVTVLDENDNAPTFLHVAEGREFLLQVLEDK
PTGLLVAALQAKDPDKGENGTVFYMLSGAWAEHFSLHMATGELRTATPLQQADQGEYLFT
VTASDRGVIPRSTAATLRIQVVSSSHALTRPETTVLTFYAMEGLPPGSSIGSVAPLEPRG
QVIYMLVGGSNGDGVFIVDASTGEIYLVQELDYEAERRHTLHVSVEDSWHGYPSQHLLLV
EIHVQDSNDHGPIWPQDPVTVVVSETATPGLAFYTFQALDGDGPGPNSQLHYSLLRQDTL
HPVFQLDALTGELSLQAPLDRESQSAFLLAVMATDQAHNVSQRHSAAVTAHIFIMDENDN
APEFLSPPRVDVPEDQPTGFLVLQVVARDQDMGENGRVSYLLRAGNPDGRFYLNPSTGAL
SIVRALDREEVSQHNLTVVATDHGSPRHSATQLLLVQVLDVNDETPTFEKSVYEGQVAEN
LPAGIPVLQLHATDQDLGTNGQVTYGGIAGDDFTIDPHTGLISTLGPLDHEERAEHLLTV
YAQDGGLPPRQAKATVRVLVVDENDHAPIFQNDAYSLAVPENQSHQKLFTLRATDHDAGD
NGRVSYSLAAGDPEEDFALDPLTGQLSTVQGLDRERKATYMLTTQACDNGSPARCASMAV
QVQVLDLNDNAPHFVQEAYTAEVPEDLPVGSPVLQLKAQDPDEGNNGRISYFLANESLGA
FQVEPQTGRLYSTQPLDRERRATYSFQGLAIDSSPSAPRSASTAITVTVQDVNDHVPSFP
LSPLTVTLPHHTPPKRVVATLRAEDHDAGANASILYRFAVPAPAFAINTYTGAIQLLQPL
GSLNQRQRTLFVLASDLGQPPLSSIGVVVIHMQDESHWGVHFPRSTSDVVLPENAAPGTL
VLSTPARHTAGSSGQITYSIVSGNENGAFRIQPDSGAISVSNAEGLDFELQPRLRLVMQA
ESPASFGFMAVTINLQDMNDNHPRFQLQNYVAFVGEAQGYDLPVIQVVANDLDQGPNGQV
VYRINQTQPMDGLYRINAQTGAITTAAILDREIWAQTRLVLTATDRGHPPLVGSATLTVV
VMDLNDNSPTIPAPWEVRVAENTLLGTEITLVTGNDVDCGPQLVYALYLDSVNTRTFSIL
PYGGHIVLTEPLDYEQRNHYTLTVRASDSQHETEANLTVLVEDVNDNAPTFAQALYQVLI
PEQTPAGTPLLTLSATDLDSGTNGEVTYQLLTASDFVAIHASNGTLFTTQRLMLELEHPT
LDLVVEACDNGLPRLSAWASVQIQVLDVNDHRPQFLKPQYNASVTEDLRPGTILLTLEAT
DGDVTRDNAALDYTIVSGNSGHVFQLEGHVGKASALILIEPLDFEGVALYNLTVAVADRG
VPQHSAIVPVVLTVLDINDNPPVFGRSAYHMTVSESTMPGTELLRVAAHDPDLGLHGQVQ
YSISSGDPSGLFQLHPFSGALRLVKALDCEKWAQHSLVIQASDGASGHFALASVAVEVKD
VNDNLPYFPIDLLSTSLRENLPPGSLVTTIRAVDPDVGIFGELHYKLLQAEDWGVFDINS
SSGELHSRLPFDYERSKTFQLLVQATDPGNGSATVTVRVLVTGEDEYDPVFLSSSFHFDV
PEGAHRGQSIGHVTATDEDEGPDGVVLYALIKPSPFFEINETSGILYLQMDSQVPSGGPT
RSEPRQMVLEVQAHSPLHASRSASTQVTIDVTHTAFGLVPDLNLLLVIAVAASLSVVVVL
AAVAIVLALLRSQQGRGHKEADLVHMQSGSMQKLGHADPALPGGDCLYHEALPGYGTDSG
GAYTTRGGSLDPSHSSGRGSAEAAEDDEIRMINECPRMSSVTSSLQEHLVTRGPDSGIQT
DADRLSDISCEPTTLDATHWFKNRKGPSLLLPGQPPQLYRDDSGSSGAYLGTGCGLSVPS
TKDYSFPEDGKPCVDGSLTAIVASDEELRGSYNWDYLLNWCPQFQPLASVFTEIARLKDE
SSLRKPFPAKPKPRIDPPPLITSVAHPGAKSVPPKPAVGRAFPHLSSLRRSPISHEGSLS
SAAMSPSFSPSLSPLAARSPMVSPFGVSQGPTASSTISIEHSLEAPEEAELRI
NT seq
9702 nt
NT seq
+upstream
nt +downstream
nt
atggggccccttccccttgtgttgctgctgctgctgccactgcttgggggccgctgcacg
gcattgccaggcactctggacctgcaggtcgatgaggagatgcctgcaggcaccatcatt
ggggacatcagtgcaggcctgcccacgggcaccaccagctatatgtacttcatctctgcc
caggagggcagcggcgttgccacagatcttgagattgatgagaactctggcatcatcaag
acggcaggggtgctggatcatgaaagccgcgaccactacagtttcattgctgtcacccca
gatggagccacagtggaagtcaacatccaggtcaatgatatcaatgaccacgcccccacc
tttcctaagcagcaggctgccctcctcatcccagagcgcacacacaccggcagccgcttc
cctctggatcctgcctttgacgcagacagcgatctgcttggtacacagggctacgcaatc
aaggcgggaaacgtgggccaggctttccagctggagacgcgccgtggacccaatggggtc
ttgcacccggagctggtagtgagcagcattctagaccgtgaggcccgctctacctttacc
ttgcttcttgaggcctatgatggcggatcccctccaaggagctcccaaatgacattggaa
gtgtctgtccaagacattaatgacaatgcaccagccttcaaccagagccgctatcatacg
ctgatcccagagaacctgctccccggcagcagcatcctccaggtctttgcctgggacgcc
gacgagggagacaatggggcagtggtgtatgagatcaaccgccggcagagtgacccggag
cagtttttcaccatagatgcatccacgggagtaatcaagctcaacaagggactggattat
gagctccggaaggtgcatgagctcgtggtacaggcccgggacaaggccatccacccagaa
gtttccaccgcctttgttacaattcaggtccgggattacaatgacaaccagcccaccatg
acaattatcttcctcagcgaggatggctccccacgcatctctgaaggggcacagcctggc
cagtttgtggcccgcatttctgtctctgatcctgactacggagaatacgccaacgtcaac
gtctccttagaggggggcgaggggaaatttgctctcacgaccaaagacaatatcatctac
ttgatctgtgtggatcaaatgctggaccgcgaggaacgggattcttacgagctgcgagtc
acagccacagatgctggaactccccccctgcgggccgaatcagcttttgtgctgcaggtg
atggatatcaatgacaatcctcctctctttgatgtccaggagtatgaacagagtgtccct
gaggtggtttacccaggcagctttgtcctgcaagtgaccgcccgtgacaaagaccaaggg
cccaacggggagatccgctacagcatcctgcacaaccaccactcccactctcactggttt
gccattgatccggccactggcatcgtcaccactgcttctgccttggattatgagactgac
ccgcagcctcggctgaccgtgctggccacagaccgtggcaagccccccctctcttctacc
acagtggtccttgtcaccctgcaggatgtcaacgataacgagcctgtctttgaaagtaac
ttctacaatatttccgtgaaggagaacgtttcccccggcacctgcttcctccagatcatg
gccaccgatgcagatagcggttccctgggaagcgtctcttacgccctgggcacagggctc
ggcagcctgggtccctctgcgttccttcttggggaagagaccggccagctctgcactgca
caaggcctggaccgggacgaggggccttctacctatgacttcacagtcacagccattgat
gggggtgggctcagctccacggcctacgtgaaagtctttctggaagacgtcaatgacaac
gcaccggcattctacccccttgagtatgctgccagcatcagcacccaaagccagccgggt
tctgctgttctgcgagtcactgctcaggataaggatgagggcctgcacgggcgagtgacc
taccgcattgccaatggcaacatgttgaccgtttttgccatcaaccctgatactggtgtc
atctcgttgcggaggccgctcactggcaaggccaacctcttggtgcagctggaggtagag
gctgaagatggcggaggcctggcagctcagccaactgctcagatcaacatcagcattgtg
gcgggcaccgtctcccctccgagctttgagcgggcccagtattacttcacagtcccagag
aatacccggccgggcagtagcgtgggatccatccatgcacacaatgctccaggccaaacg
gacagtgtgttttactccatttctgcgggggacccacaaggccatttctccattgacccc
agctcagggcagctgcacaccaacctggccctggaccatgaagcgcagtccattctgacc
ctggaggtccaggcccgcagcggctccccgcccgcgtacagcagtgcccgggtgcagatc
actgtttctgacatcaatgacaatcccccccacttccccttgtcctccgattctgtgtcg
ctgccagagggagcagccctgggcaccattgtctataccgtgcaggctgaggaccctgac
agcggagccaacggacaagtccactttgagctggcctcccgtggaatggctgctttcggt
gtagaacgtctgtcagggaaggtgcggctgatgggggctcttcctcaggaaagcctcagc
ccttacaagctgctcattctggcacaggacggcgggaccccgcggctcagtgccacattc
accctcctagtccacatgcaggctgaagaccagctgggtcccctctttgatactctcacc
tacagagtagaggtgcgggagggggtgccagtgggcacccattttttgcaagtgagggct
ctggcccaggaacacaacgccctccttgcctaccatctgcgtgcagatggtgatgcgacc
agctttgggattgcacctgacacagggtggctacatgtgcgccggactcttgatcgggag
gtgcaggagctgtatgtactgactgtcttggctgtagctggagagggtgaagggcgccag
acagggaccagcacagtccgggtcaccgtcacggatgagaatgacaacagtcctcgtctg
agcgaggagcgctacttcttcacggtggtggagaaccggcccgctggcagcagtgtgggc
cgtgtgatagccactgacttggatgctgggtccaacagccgcctgaccttccgcctggtg
ccacatgagggccatttcctcatccacacccagactggtgagttgagcattcgaaagagc
ctcgaccgggagcagcaaagcagctatcagttgcaagtcgtggtacaagatggggggaca
ccgccccgcagcaccacaggcacaatctacgtcactgtgctggacgagaatgacaatgcg
ccgaccttcctacacgtggctgagggacgtgaatttctcctgcaggttctggaagataag
ccaactgggctgttggtggccgcattgcaggccaaggacccagataagggtgagaatgga
accgtcttctacatgctgtcaggtgcctgggcagaacacttctcactgcacatggctacg
ggggagctgcgcacggccacccccttgcagcaagctgaccagggagaatatctgttcact
gtcactgcaagtgaccgaggcgtcattcccaggagcacagctgccacactgcgcattcag
gtggtatcttccagccatgccctcacccgccccgaaacaaccgtgctgaccttctatgcc
atggagggcctgccacctggctccagcattggctcggtggctcccctagaaccccgtggg
caagtaatctacatgctggtggggggcagcaatggagacggcgtctttatcgtggacgcc
agcacgggcgagatctacctggtgcaagagctggactacgaagcagagaggcggcatacc
ttgcacgtgagcgtggaagactcatggcatggttaccccagccagcacctgctcctggtt
gagatccacgtacaggatagcaatgaccatggccccatttggcctcaggatcccgtcaca
gtggtggtgtcagaaaccgctacaccgggccttgccttctacaccttccaggctctggat
ggcgatggtcccggtcccaacagccagctgcactatagcctcctgcggcaggacaccctg
caccccgtcttccagctggatgccctcacgggggagctgagcctgcaggcccctctagac
cgagagagccagtctgccttcttgctggctgtcatggccacagaccaagcccacaatgtc
agccagcgccactcggcagctgtgaccgctcacatcttcatcatggatgagaacgacaat
gcgcctgagttcctttctccaccaagagttgatgttcctgaggatcagcccacaggcttt
ctggtgctgcaggtggtggccagagaccaggatatgggagagaacgggcgagtcagttac
ttgttgcgagcagggaaccctgacgggcgattctacctcaatcccagcacaggggcgttg
tccattgtgcgggctctggaccgggaagaagtatctcagcacaacttgacagtggtggcc
acagaccacggatccccacggcacagtgccacacagctcctgttagtgcaagtgctggat
gtgaacgatgaaacaccaacctttgagaagagcgtctatgaaggccaggtggccgaaaac
cttcctgccggcattccagtgctgcaactccatgccactgaccaggaccttgggaccaat
ggccaggtgacttatggcggcattgctggggacgacttcacgattgacccccacacaggc
ctgatcagcactctaggccccttggatcacgaagagcgagctgaacacctcctcacagta
tatgcgcaggatgggggcctgcccccccgccaggccaaggccaccgtgcgtgtcctcgtg
gtggatgagaatgaccatgcccccatcttccagaatgatgcttactctctggccgtgcca
gagaaccagagtcaccagaagctattcactctgcgtgccacagaccacgatgcgggggac
aatgggcgcgtctcttactcactggcagctggggaccctgaagaggattttgctctggac
ccgttaactggccagctgtccactgtgcaagggctggaccgggaacgcaaagccacctat
atgctaaccacccaagcctgcgacaacggctctcctgcccgctgtgccagtatggcagtt
caagtacaggtgctggatctgaacgacaatgctccccacttcgtgcaagaggcctacact
gcagaggtgcctgaggacctgcccgtgggatcccccgtgctacaacttaaggcacaagat
ccggacgaaggcaacaacggacgaatttcgtatttcctggcaaacgagtcgctgggagcc
ttccaggtggagccgcaaacaggccgcctgtacagcacccagccacttgaccgggaacgc
cgggccacctattccttccaaggcttggccattgattcttccccttcagcccccaggagc
gcctccacagccatcacggtcactgtccaagatgtgaacgaccatgtcccatccttcccc
ctcagcccactcaccgtcaccctgccccaccatactccacccaagcgagtggtggctact
ctgcgggcagaggaccacgatgctggggccaacgcttccatcctgtatcgttttgctgtg
cctgccccagccttcgccataaacacgtacactggggccatccagctgctgcagcccctg
gggagtctcaaccagcgccagcggaccctgtttgtgctggctagtgacctggggcagccc
cccctctcctccattggcgtggtggtcattcatatgcaagacgagagccactggggagtg
cactttccacgcagcaccagcgatgtggtccttcctgagaacgctgccccaggcacactg
gtgctgagcaccccagccaggcacaccgcaggatcatccggccagatcacctacagcatc
gtgagtggcaacgagaacggcgccttccggatccagcccgactcgggagcgatttctgtc
tccaacgctgaagggctggactttgagctacagccccgcctgcgcctggtgatgcaagcg
gagtcccctgcctcctttggcttcatggctgtcaccatcaacctgcaggacatgaatgac
aaccatccccgcttccagctgcagaactatgtggccttcgttggagaggcccagggctac
gacttgccggtcatccaggttgtggccaatgatttggatcagggccccaatggccaggtg
gtctacaggatcaaccagacgcagccaatggacggactctaccgaattaatgcccagacg
ggagccatcaccacagcagccatcctggacagggagatctgggcccagacccggctggtg
ctgactgcaacagacagaggacaccctccccttgtgggctcagccacactcacggtggtg
gtgatggatctcaatgacaatagtcccaccatccctgcaccctgggaagtgcgggtagca
gagaataccttgctaggcactgagatcaccttggtgactgggaacgatgtggactgtgga
ccacagctcgtctacgcactctacctggacagcgtcaacaccaggacctttagcatccta
ccctacgggggccatattgtgctaacagagcccctggactatgagcagcgtaatcactac
accctcacggtgcgcgcttctgactcccagcatgagacggaggccaacctcacggtgctg
gtggaggatgtgaatgacaatgcgcccacctttgcccaggcactctaccaggtgctcatc
ccagaacaaacccctgctggcactcccctcctgactctcagcgccacggacctggactcc
ggcaccaacggggaagtcacctatcaactgctcacagcaagtgattttgtggccatccat
gcaagcaatggaaccttgttcaccacccagcgtctgatgctggagctggaacatcccacg
ctggatttagtggtggaagcttgtgataatggtctcccccgtctctcagcctgggcctct
gtgcagatccaggtcctggatgtgaatgaccacaggcctcaattcttgaaacctcagtac
aatgcctctgtgacagaggacctgcgcccaggaacgatcctgctgaccctggaagccaca
gatggtgatgtgactcgggacaacgctgccctggattacactattgtgagcgggaacagt
ggtcatgttttccagctggagggccacgtgggcaaggccagtgccttgatcctgattgaa
cctcttgattttgagggtgtggccctctacaaccttactgtggcagtggctgaccgagga
gtgccacagcacagtgccatagtgcctgtggttctcactgtgctggatatcaatgacaac
ccacctgtctttgggcgctctgcttatcacatgactgtgagtgagagcaccatgcctggc
acagagctgctgcgggtggcagcccacgaccccgacttgggcctgcatgggcaagtgcag
tacagcattagttccggtgaccccagtgggctcttccagctgcatccattctcaggagca
cttcgcctggtcaaggctctggactgtgagaaatgggcccagcacagcctggtgattcag
gcctcagacggagccagtgggcattttgccctggcatccgtggctgtggaggtgaaggac
gtgaacgacaatcttccctactttccgatagacttgctgagcaccagcctgagggaaaac
ctacctccaggaagcctggttaccaccatccgtgcagtggaccctgatgttgggatcttt
ggggagctgcattataaacttctgcaggcagaggactggggtgtctttgacatcaacagc
agctctggagagctacattcacgcctgccctttgactacgagcggagcaagactttccag
ctgcttgtgcaggccacggaccctggcaatggctctgcaacagtcacagtgcgtgtcttg
gtcactggggaagatgagtatgaccctgtcttcctcagctcaagcttccactttgatgtt
ccagagggggcacatcggggccaaagtatagggcacgtgactgccacagacgaggatgag
ggcccggatggggttgtcctctatgctctgatcaagccatccccattctttgagatcaat
gaaacgagcgggatcctgtatctgcagatggacagccaggtgccttcggggggccccacc
aggtcagaaccacggcaaatggtcctggaggtacaagcccacagccccctacatgcttct
cgttcagcctccactcaggtcaccattgatgtgacgcacacggcctttggcctggtgcct
gacctaaacttgctgctggtgatagcggtggctgcctcgctgagtgtggtggtggtgctg
gccgccgtggccattgtgctcgctcttctccggtcacagcagggccgtggccataaggag
gccgatttggtacacatgcagagtggctccatgcagaaattgggccatgcagacccagcc
ctacctgggggggactgtctgtaccatgaggcactgcctggctatggtacagattctggg
ggagcctataccacaagaggaggatcactggacccatctcactcaagtgggcgaggctca
gctgaagctgccgaggatgacgagatccgtatgatcaacgaatgcccccgcatgtccagc
gtcacctcttccctgcaggagcatcttgtaacacgcgggcctgattctggcatccaaaca
gatgctgatcgcctttctgacatctcctgtgagccgaccacgcttgatgccacacactgg
ttcaagaacaggaaggggccaagtctgctgcttcctgggcagcccccgcaactctaccgg
gatgacagtggcagcagtggggcctacctgggcactggttgtggcctcagtgtcccctct
accaaggactactcttttccagaggacgggaagccttgtgtggacggctccctgactgcc
attgtggcgagcgacgaggagctgcgtggcagctacaactgggactatctcctgaactgg
tgtcctcagttccaaccgctagccagcgtgttcacagagatcgcccgcctcaaggacgag
agctcgctgcgcaagccctttcctgccaagcccaagccccgcattgacccccctcccctc
atcacttctgtggctcaccccggggccaagtcagtgccccccaagccagcagtaggccgg
gctttcccccacctgtcctccctccgacggtctcccatcagccacgagggctccctctcc
tcggcagccatgtctcccagcttctccccctccctctcccctctagctgcccgatctccc
atggtgtccccttttggggtctcccaggggcccactgcctcctccactataagcattgag
cactctttggaggcccccgaagaggcagagctccgcatttag
DBGET
integrated database retrieval system
