Crotalus tigris (Tiger rattlesnake): 120310052
Help
Entry
120310052 CDS
T08476
Symbol
HSPD1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120310052 (HSPD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120310052 (HSPD1)
03110 Chaperones and folding catalysts [BR:
ctig03110
]
120310052 (HSPD1)
03029 Mitochondrial biogenesis [BR:
ctig03029
]
120310052 (HSPD1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ctig04147
]
120310052 (HSPD1)
Enzymes [BR:
ctig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120310052 (HSPD1)
Messenger RNA biogenesis [BR:
ctig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120310052 (HSPD1)
Chaperones and folding catalysts [BR:
ctig03110
]
Heat shock proteins
HSP60 / Chaperonin
120310052 (HSPD1)
Mitochondrial biogenesis [BR:
ctig03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120310052 (HSPD1)
Exosome [BR:
ctig04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120310052 (HSPD1)
Exosomal proteins of other body fluids (saliva and urine)
120310052 (HSPD1)
Exosomal proteins of breast cancer cells
120310052 (HSPD1)
Exosomal proteins of colorectal cancer cells
120310052 (HSPD1)
Exosomal proteins of bladder cancer cells
120310052 (HSPD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120310052
NCBI-ProteinID:
XP_039203917
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MLRLPSVLRQLRPVSRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKDKYKNIGARLVQDVANNTNEEAGDGTTTATVLA
RSIAKEGFEKISKGANPVEIRRGVMLAVEAIINELKKLSKPVTTPEEIAQVATISANGDK
EIGNIISDAMKKVGRKGVITVKDGKTLNDELEIIEGMKFDRGYISPYFINTAKGQKCEFQ
DAYLLISEKKISSVQSIVPALEIANNHRKPLIIIAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLKDMAIATGGAVLGEEGLTINLEDVQPHDFGKVGEVIVTKDDCLLLKG
KGDKAQIEKRIQEIIEQLETTTSEYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VNDALNATRAAVEEGIVLGGGCALLRCIPALDVLIPANEDQKTGIEIVRRTLKIPAMTIA
KNAGVEGSLIVEKIMQSPPDVGYDAMLGDFVNMIEKGIIDPTKVVRTALMDAAGVASLLS
TAEAVVTEIPKEEKDAAAAAMGGMGGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtttaccatcagtgctacgtcaactaaggccggtatccagagccctggcccca
caccttacaagagcctatgcaaaagatgtgaaatttggagcagatgccagagctcttatg
ttgcagggagtagatctactagctgatgctgtagctgtcactatgggaccaaagggaaga
acggtaattattgaacagagttggggaagccctaaggtgacaaaagatggcgttacagta
gccaaggcaattgacttaaaggataagtacaaaaacattggagcaaggctagttcaagat
gttgccaacaacaccaatgaagaggcaggagatggtacaactactgcaacggtactggca
cgttcaattgccaaggaaggatttgaaaagatcagtaaaggagcaaatccagtggaaatt
agaagaggtgtgatgcttgctgtggaggctataattaatgaattgaagaaattgtccaaa
ccagtcacaactccagaagaaattgctcaggttgccacaatatcagcaaacggggataaa
gaaattggtaacataatctccgatgccatgaagaaggttggacggaaaggggttattaca
gtgaaggatggaaaaaccttaaacgatgagttggaaattattgaaggtatgaagtttgac
agaggctacatctctccctacttcattaatacagccaaaggacagaaatgtgaattccaa
gatgcttatctcttaatcagtgaaaagaagatttccagtgttcaatccatagtaccagct
cttgaaattgcaaataatcatcgtaagcctttaattattattgctgaagatgttgatgga
gaagccctcagcacacttgtactaaacagattgaaagttggcctgcaggtggttgcagta
aaagcacctggttttggtgacaatagaaaaaatcaacttaaagatatggcaattgctact
ggtggtgctgtattaggagaggaaggtttaactataaatctggaagatgttcagcctcat
gactttggcaaagttggagaagtcattgtaaccaaagatgactgcttattgcttaaagga
aaaggtgataaggctcagattgaaaaacggattcaagaaataattgaacaactggaaacc
acaacaagtgaatacgaaaaagagaagctaaacgagcgcttggctaagctttctgatgga
gtagctgtactaaaggttggaggaacaagtgatgttgaagttaatgagaagaaagacaga
gtcaatgatgccctgaatgccactcgtgctgctgtagaagaaggcatagtcctaggtggt
ggctgtgcattgctccgttgtattccagcactagatgttttgattccagccaatgaagat
cagaaaactggcatagagattgtaagaagaacactgaaaattccagctatgactattgcc
aagaatgcaggggttgaaggatcactgatagttgagaaaatcatgcaaagcccacctgat
gttggttatgatgcaatgcttggtgacttcgtgaatatgatagaaaaaggcattattgac
ccaacaaaggttgtgagaacagcgctgatggatgctgcaggagtagcttcccttttatct
acagctgaagcagttgtaactgaaatccccaaggaagagaaggatgctgctgctgctgct
atgggaggaatgggtggaggaatgggaggtggtatgttctaa
DBGET
integrated database retrieval system
