Crotalus tigris (Tiger rattlesnake): 120310198
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Entry
120310198 CDS
T08476
Symbol
RXRA
Name
(RefSeq) retinoic acid receptor RXR-alpha isoform X1
KO
K08524
retinoid X receptor alpha
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03320
PPAR signaling pathway
ctig04148
Efferocytosis
ctig04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120310198 (RXRA)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120310198 (RXRA)
03320 PPAR signaling pathway
120310198 (RXRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120310198 (RXRA)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ctig03310
]
120310198 (RXRA)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
120310198 (RXRA)
Nuclear receptors [BR:
ctig03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
120310198 (RXRA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
CRT10
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
120310198
NCBI-ProteinID:
XP_039204273
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MDTKHFLPLDFSVQVNSTSLSSPAGRGGPMATPALHPSMGPSLGGPLGSPGQLHSPINGM
GPPFSVISSPMGPHAMSGPSTPSLGFGAGSPQLNSPLNPVSSTEDIKPPLGINGVLKVPM
HPSSIMPAFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDK
RQRNRCQYCRYQKCLAMGMKREGMEHHPSRPTRLPGRQEQSAVQEERQRGKDRNENEVES
TSSAHEDMPVEKILEAELAVEPKTETYIEANMGLTPSSPNDPVTNICQAADKQLFTLVEW
AKRIPHFSELPLDDQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGV
GAIFDRVLTELVSKMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEA
YCKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQMT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaaacacttcctcccgctggatttttccgtccaagtgaattcgacttcctta
agttctccggccggccgggggggccctatggccacgcctgccctccacccctccatgggg
cccagcctcgggggccccttggggtcacccggccagctccactcgcccatcaacggcatg
gggccgcccttctccgtcatcagctccccgatggggcctcatgccatgtctggaccgtcc
acccccagcctcggattcggagctggcagcccgcagctcaactcccccctgaaccccgtg
agcagcacagaagacatcaagccccccctgggcatcaacggggttctcaaagtgccaatg
cacccctcctccatcatgcccgccttcaccaagcacatctgtgccatctgtggagaccgc
tcctcaggcaagcattacggggtatacagctgtgagggctgcaaaggcttcttcaaacgg
acggtgcggaaggacctgacctacacctgccgggacaacaaggactgcctgatcgacaag
cgccagcggaaccggtgccagtattgccgctaccagaagtgcctggcgatgggcatgaag
agggaagggatggagcaccatccatcccgacccacaagactccctggaaggcaggagcaa
tcagctgtccaggaggagcggcaacgaggcaaagaccgcaacgagaatgaggttgaatcc
accagcagcgctcacgaggacatgccggtggaaaagatcctggaagctgaactggcggtg
gagcccaagacggagacctacatcgaagccaacatgggcctgacgccgagttcgcccaat
gacccggtcaccaacatctgccaagcggcagacaagcagctcttcacactggtggagtgg
gccaagcggatcccccatttctcggagctcccactggacgaccaggtcatcctgctccga
gccggttggaacgagttgctgatcgcctccttctcccaccgatccatcgcggtcaaagac
gggatcctcctggccacaggcctccacgtccacaggaacagtgcccacagtgcgggagtc
ggggccatctttgacagggtattgaccgaacttgtgtcgaagatgcgagacatgcagatg
gacaagaccgaattggggtgcctgcgagcgattgtcctcttcaacccagactcaaagggc
ctctccaaccctgctgaggtcgaagcactgcgggaaaaggtctacgcctcgctggaggcc
tactgcaaacagaagtaccctgagcagccagggaggttcgccaagctgctgctccgcctg
cccgccctccggtccattggcctgaagtgcttggagcacctcttcttcttcaagctcata
ggggacacgcccatcgacaccttcctgatggagatgctggaagcgccacaccagatgact
taa
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