Crotalus tigris (Tiger rattlesnake): 120310264
Help
Entry
120310264 CDS
T08476
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ctig03016
]
120310264 (TRMT13)
Enzymes [BR:
ctig01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
120310264 (TRMT13)
Transfer RNA biogenesis [BR:
ctig03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120310264 (TRMT13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
DUF3877
DUF5507
NNH6
MnmE_helical
Motif
Other DBs
NCBI-GeneID:
120310264
NCBI-ProteinID:
XP_039204426
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MTGAPVELASFPQPGRCAYFVERKKRFCKMVPAQGRRFCGEHSAEEEEHKRKRIPCPLDP
KHTVYEDQLQKHLKKCNSREKPKPVYFIKDINAGLKNETELSEEQQIRISALSKQELENL
IRKLKKANNAINYVLKDQILSHHALQEALNDPQNGDAAFKHLKQQASILGNMKRLHLLGP
GNCFVEFGAGRGKLSHWLDIALQDVQDVHFLLVERESTRFKVDGKHRKRYFERLQVDIQH
LCLSKVPLLVEQKLPLIGIGKHLCGAATDLALRCLVDTYRKSGLEEKEGPVIKRLKTDCS
GKIHSKCATENWSPIAGIVIALCCHHKCEWRHYVGQDFFTRVGLGPIEFNFFKRMTSWAT
CGMRERGTETSRSGIQNEGQRNEGEHDQDDINADCSLDSLQRLLTAEERKQIGHLCKLLI
DHGRIEYLEQRRYEAALQRYTESSVSLENVLLTAVPAQSS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacgggggctcctgtcgagctggcttcttttcctcagccggggcgatgcgcctatttc
gtggagcggaagaagcgcttttgcaagatggtcccggcgcagggaaggcgcttctgtggc
gagcacagcgccgaggaggaagaacataaaaggaaaagaatcccttgtcctttggatcca
aaacacactgtgtatgaagatcagctacaaaaacatttgaaaaagtgtaattcaagagag
aagccaaagcctgtctactttattaaagatattaatgcaggactgaaaaatgaaacagaa
ttatctgaagaacagcagatacgaatttcagcactttctaaacaagaactagagaactta
attaggaagcttaaaaaagcaaataacgctataaattatgtacttaaggaccaaattctt
tctcatcatgcgttacaagaagccctaaacgatccccagaatggagatgcagcttttaaa
catttgaagcaacaggcttctatattaggtaacatgaaaagattacatttgcttggacca
gggaactgttttgtggaatttggagccggacggggaaaactgtcccactggttggatata
gctttacaggacgtccaagatgttcattttcttcttgttgaaagggaatctaccaggttc
aaggtagatggcaaacacagaaaacgttactttgagaggcttcaagttgatatccagcat
ttatgtttaagtaaagttcctcttcttgtggaacagaaactacctctgataggaattgga
aagcatctgtgtggtgctgcaacagatcttgctctgagatgcttagttgacacctatagg
aaatcaggtcttgaagaaaaggaaggcccagtaattaaacgcctcaagactgattgttcc
ggcaaaatacatagcaagtgtgcaactgaaaactggagccctatagctggaattgttatt
gcactttgttgtcatcacaagtgtgagtggagacattatgttggccaagatttttttaca
agagtaggactgggccccatagaatttaatttttttaaaagaatgaccagctgggctacc
tgtggcatgagagaaagaggaacagagaccagcagaagtggcattcaaaatgaaggacaa
agaaacgaaggtgaacatgatcaggatgatataaatgctgactgcagtttggatagtctt
caaaggctgctgactgctgaggaacgaaagcagatagggcacctttgcaaattgttgatt
gatcatggtcggatcgaatacttagagcagagacgatatgaagctgcgttgcaacgctat
acagagtcaagtgtgtcattagaaaatgttcttctgacagctgttccagctcagtcttcg
tga
DBGET
integrated database retrieval system
