Crotalus tigris (Tiger rattlesnake): 120310496 Help Entry 120310496         CDS       T08476                                  Symbol RC3H1 Name (RefSeq) roquin-1 isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism ctig  Crotalus tigris (Tiger rattlesnake) Brite KEGG Orthology (KO) [BR:ctig00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:ctig03000]     120310496 (RC3H1)    04121 Ubiquitin system [BR:ctig04121]     120310496 (RC3H1) Transcription factors [BR:ctig03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     120310496 (RC3H1) Ubiquitin system [BR:ctig04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     120310496 (RC3H1) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-RING_UBOX Prok-RING_4 zf-RING_2 zf-C3HC4_4 zf-CCCH zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 FYVE zf_CCCH_4 PaaA_PaaC Vesi_VP2 zf-CCCH_UNK Baculo_IE-1 zf-RING_4 zf-CCCH_4 zf-RING_6 Motif Other DBs NCBI-GeneID:  120310496 NCBI-ProteinID:  XP_039204890 LinkDB All DBs Position Unknown AA seq 1126 aa AA seqDB search MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD IEHLPVNSALLQLVGAQMPEQQPITLRSGAEDTKHYEEARKCVEELALYLKPLSSARGVG LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLTRLRPHLELL ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGVDQQQPPQHSKYKTYMCR DMKQRRECPRGASCTFAHSQEELEKFRKMNKRLGPRRPLSASLGQLNEVGLPAAAIISDE ATVDLPSRKPSTLPNGIVSPGNAVTQLISRGTDSSYDSVMKPGKMDHHSSSAPGSPPDLL EPVSKSSHPVPPRGPTDLPPVSVGKQLQIVPRGSQLYPAQQTDMFYPDPRGAAPPFEPPP YQAGVYYPPAQSLQCMSRFVRPPSSVPEPGPPFVEQHYAPYLQDRIMNSQYSAQPQQYPP MSQPVYPPHYDSRRVYPAAQPYQREDIIRGSPVPIEISPPTVSPYVPETRDRYQQVEGYY PVGPHLNQIRPSYHREPYSRAPPQPHPSLDELHRRRKEIMAQLEERKVISPPPFASSPTL PHSLHTDEYLDEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDIVAVGLVEMVN VDSKGMRDQRLDLQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNPGPMQAMTVQ GASAKSVSVSDYSPYGTHSAWGGSPYSPHQTVPSQGRLGDRERLSMTDIANHGKSLPSSE REQQLRLELQQLNHQISQQTRGLEAVSNRLLLQREATPLAGQPQPPPPPPKWPGMISSEQ LSLELHQVEREIGKRTRELSMESQSSLDVKNKANASKQTENGQQGKVPPEDLSLTFSDLP NGSAPTQELIGLLSNKTTALNLSEDTDAGAGDQDTQRTGATPTSAP NT seq 3381 nt NT seq  +upstreamnt  +downstreamnt atgcctgtacaagctccacaatggacggattttctctcctgccctatttgcacacaaaca ttcgacgaaacgatccggaaacccatcagtctaggttgtggccacacagtctgcaagatg tgcctgaacaagctccatcggaaagcatgtcctttcgaccagaccactatcaatacagac atagaacatcttcctgtgaattcggctttgctgcagcttgtgggtgctcaaatgccagaa cagcaaccaataactctacgcagtggtgctgaagatactaaacattatgaggaagcccgg aaatgtgtggaagaactagccttataccttaaaccactcagcagtgcaagaggtgtagga ttgaacagcacaactcagagtgtgcttagtcggcccatgcaaaggaagcttgtgacatta gtccattgccagctggtggaagaagaagggcggatccgagctatgcgtgcagcacgatct ctgggtgaaagaactgttacagagcttattcttcagcaccagaatcctcagcaattatct tcaaacctttgggctgcagtgagggctagaggctgtcagttccttggaccagcgatgcaa gaggaagctctgaagttagttcttttagctttagaagatggatctgctttatctcgaaaa gttttggttctctttgtggtacagaggttggagccacgatttcctcaggcttctaaaacc agcattgggcatgttgtccagcttctttacagagcctcctgtttcaaggtgactaaacgt gatgaggattcctccctaatgcaactgaaggaggaattcagaacatatgaagctctgaga cgagaacatgattcccaaattgtacaaattgctatggaggctggtttgcggatagctcca gatcagtggtcttcattgctgtatggagaccagtctcacaaatcccacatgcagtccatt attgacaagttgcagaccccagcctcttttgcacagagtgttcaggaattaacaattgct ctccagagaactggtgatccagctaatttgacccggcttcgaccccatcttgaacttctt gcaaatattgatcccagtccagatgccccaccacccacatgggaacagcttgagaatgga ttagttgctgtacggactgtggtacatggattggttgattacattcagaatcacagcaaa aaaggagttgatcagcaacagccacctcagcacagcaagtacaaaacatatatgtgtcga gatatgaagcagagaagagaatgcccccgtggggccagctgcacatttgcacactcacag gaagaactagaaaaatttcgcaagatgaataaacgtctaggtcctcgaagacctttgagt gcctccttaggtcaattaaatgaagtgggcctgccagcagcagctattatctcagatgaa gcaacagtggacttacccagtagaaaaccttctaccttgccaaatgggattgtttcacca ggcaatgcagtgacacaacttatctctcgtgggaccgactccagttatgactcagtcatg aaacctgggaagatggatcaccatagtagcagtgcccctggatcacctcctgatttgctg gaacctgtttccaagagctctcacccagtgcccccccgaggacctacagacttgcctcca gtttcagtgggcaagcagctccaaatagttcctcgaggctcccagttgtatccagctcag caaacggatatgttctatccagatcctcgaggagcagctcccccattcgagcctccaccc tatcaagcaggtgtatattatcctccagctcaatcattacagtgtatgtctcgatttgtc cgacctccatcatctgttcctgaaccaggacctccttttgtagaacaacattatgcaccc tatctccaagatcgcatcatgaactcacaatacagcgcacaaccacagcaataccctcca atgagtcaacctgtatatcctcctcattatgacagcagacgtgtgtatcctgctgctcag ccataccaacgggaagatattatccgaggaagtcctgttccgattgaaatttctccacct actgtatcaccatatgtacctgaaacaagagacagatatcaacaggtggagggctactat ccggttggaccacatctgaatcagattagaccttcatatcatagagaaccttatagtcgg gctccccctcagccacaccctagtctagatgaattgcatcgaaggcgaaaggagattatg gctcaactggaagaaaggaaggtcatctccccaccaccatttgcatcatcaccaaccctg cctcattctttacacactgatgagtatttggatgaagacctgaaggtagcaggaaaatac aaaggaaatgattatagccaatactctccctggtcgtgtgacactattggctcctacatt ggaaccaaagatgcaaaacccaaagacattgtggcagtgggtcttgtggagatggtgaat gtggacagcaagggaatgcgagatcaacgtttggatttacaaaggagagcagcagagact ggtgatgatgatcttattccctttggagatagacctacagtttcgaggtttggtgccatc tcacgtacctccaaagcaatgtaccagaatccaggccccatgcaagccatgacagttcaa ggggcttctgcaaaatcagtcagtgtttcagattacagcccatatggaacacacagtgca tggggaggttctccatattcaccccatcaaactgtaccttctcagggccggcttggtgac agggagagattatctatgacagatattgctaaccatggaaaatctttgccatcatctgag agagaacagcagcttcgtcttgaactgcagcagttaaaccatcagataagtcagcagaca cgaggacttgaggcggttagtaacaggctgctgttgcagagggaagcgacccctttggca ggccaaccacagcccccaccgccacctcctaagtggcctggaatgatctcaagtgaacag ctgagcttggagctgcaccaggtggagagggaaatcgggaagagaacccgggaactaagc atggagagccagtcttcattggatgtgaaaaacaaagcaaatgctagtaaacagactgaa aatggacagcaaggcaaagtaccacctgaggatctttctctaacattcagtgatcttccc aatggatctgccccaacccaagaacttataggccttctgtcaaacaaaactacagctctg aacttgtcagaggacaccgacgcaggagcaggtgaccaggatacccagagaactggagca acacccacctctgctccttga

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