Crotalus tigris (Tiger rattlesnake): 120310597
Help
Entry
120310597 CDS
T08476
Symbol
DDX39A
Name
(RefSeq) ATP-dependent RNA helicase DDX39A isoform X1
KO
K13182
ATP-dependent RNA helicase DDX39 [EC:
5.6.2.7
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ctig03041
]
120310597 (DDX39A)
Enzymes [BR:
ctig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120310597 (DDX39A)
Spliceosome [BR:
ctig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
120310597 (DDX39A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120310597
NCBI-ProteinID:
XP_039205109
LinkDB
All DBs
Position
Unknown
AA seq
427 aa
AA seq
DB search
MAEQDVENELLDYEDDEEPQGVTDVTPPLVKKDVKGSYVSIHSSGFRDFLLKPELLRAIV
DCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPLDGQVSVLVMCH
TRELAFQISKEYERFSKYMTNVKVSVFFGGLSIKKDEEVLKKNCPHIVVGTPGRTLALVR
NKTLNLRTVKHFVLDECDKMLEQLDMRRDVQEIFRLTPPEKQCMMFSATLSKEIRPVCRK
FMQDPMEVFVDDETKLTLHGLQQYYVKLKDTEKNRKLFDLLDVLEFNQVVIFVKSVQRCM
ALAQLLIEQNFPAIAIHRGMSQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVFN
YDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEGDAKILNEVQDRFEVNVAELPEEIDIS
SYIEQSR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcaggatgtggagaacgagttgctggattatgaagatgatgaagagcctcaa
ggagtgacagatgtaactcctccccttgttaaaaaggatgtgaagggctcttatgtctcc
attcacagttctggcttccgagatttcctgctgaagccagaattacttcgtgccattgtg
gattgtggctttgaacatccatcagaagtacaacatgaatgcattccacaggcaattcta
ggcatggatgtactatgtcaagccaaatcaggcatgggcaagactgctgtttttgtattg
gctactctacagcagattgagccactggatgggcaggtctctgtgctagtgatgtgtcat
acccgggaactggcatttcagatcagtaaagaatatgaacgcttctcaaagtatatgacc
aatgtcaaggtatcagttttctttggggggctttctatcaagaaagatgaagaggtactt
aagaaaaactgtccccatattgttgtgggaaccccaggccgtactctagcactggtgcgc
aacaagacactcaacctgcgcactgtgaagcattttgttttggatgaatgtgacaagatg
cttgagcagctggacatgcgccgtgacgtacaggagatctttcgattgactccccccgaa
aagcagtgcatgatgtttagtgccactttgagcaaggagatccggcctgtctgcaggaag
ttcatgcaggaccctatggaggtatttgtagatgacgagacaaagctgactctacatggt
ctgcagcaatactacgtaaagctgaaggacacagagaaaaaccgcaaactttttgacctg
ctggatgtacttgagttcaatcaggttgtgatatttgtaaagtctgtgcagcgctgcatg
gcattagcccaacttctgatcgagcagaacttcccagctattgctatacacaggggcatg
tctcaggaagagaggctctctcggtatcaacagttcaaagacttccagcgtcgtatcttg
gtggccactaatctttttggccgtgggatggacatagagcgagtcaacatagtcttcaac
tatgatatgccggaggattccgatacctatttacacagggtggcccgggctgggcgcttt
ggtacgaaaggcttggcgattacttttgtgtcagatgaaggtgatgccaaaatccttaat
gaagtacaggatcgctttgaggtcaacgtggctgagctcccagaagagatagacatctcc
tcttatatagaacaaagccggtag
DBGET
integrated database retrieval system
