Crotalus tigris (Tiger rattlesnake): 120310840
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Entry
120310840 CDS
T08476
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ctig04121
]
120310840 (RBBP6)
Enzymes [BR:
ctig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120310840 (RBBP6)
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
U-box type E3
120310840 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
120310840
NCBI-ProteinID:
XP_039205624
LinkDB
All DBs
Position
Unknown
AA seq
1750 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKCTSKTYVISRTDPVSGPSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKICPTNGDK
NFESVPRIKKSTGIPRSFMMEVQDPNTKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTSLLESEEHTCPTCH
QTDVSPDNLIANKFLRQAVNNFKNETGYTKRLRKQAPPPRPAVQRNMPSVPRPTGSRQQD
PLILPVTSAQVHASASPPLSLPPGQAPPATSMLAVNQSASTSISDVPTAMSLAIHAEKPG
GPFREGDGLGSAAALVSASDHPKLHSSLLINTVLEEKGYQVPVLGQPALAGQLSSHGHSI
PTMGQPMRTNPVRSAASRSGWEPSSNRGRPHSDRTQRTQAPTLPASTPVFVPVPPPPLYP
PPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPAPANISTPWVPTPVPTAHSN
TIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSYSRS
KSPYSASSYSRSSYTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYNRRGRGKSRNYRS
RSRSHGYHRSRSRSPPYRRYHSRSRSPAYRGQSPNKRPGPQGEGEREYFGRYREIPVYDM
KAYYGRSVDMRETFEKERYRDWETYREWYEKYFKGFPAGAQPRPLLNRENFSPERFGPPG
PRRENSPYIRGRRDDYPGGLGHRNRNLGGGYAEKLPGREGHNMKDVTKLKDKEADNPAGD
AKGNRHKKHRKRRRGEEGDGFPSADVLEGSRKPAAGEEGRPDSLFVPPSRDDATPVRDEP
MEADSVAFKPISDKERKEKPKGRVEKTKQKTSEGAATTKKEVQVKPAKAAPQEKAEADRE
RSPRTEPPAKKGKEELPKADGPKPSSQKDEKPPSAPRKVHPRGAKEHPEAKSTKEEKAKK
EHPKEAKQEKPSSKEEKSKKPADKTKSADAKPEKRKRKMEDKVDKEPETTSLKASKQEVT
EPKPLPKGKSDPEAEKTERTPEKEKTVLPVVPAKKIKLNRETGKKIAGAESVPPVKEASA
EKPEPVVSKAKQEKGKGKMRRKVAAADGSGSTLVDYTSTSSAGGSPVKKLEDKLDTKRTV
IKTLEEYNNDITAPAEDVIIMIQVPQSKWDKDDFDSEEEEEQENVKSAQVSSAIGKPASI
IKSVNTKLPNPVKHNEKDPEPLERNSRATKEPGRETSQPDPKTSKTAASNEKGKIKDRDQ
AASDRDPSEKRKSGAQPEKERSERGTEQGNVKSGSSHSSRDSRSSDKHDSAHGSSTKDIT
PSREKKSDGDSSRDHSSSKRREERGGLTRKKASPSRSREPAPSASKSKTREERGEQPKKE
NWDTKRSSYSPSRDRRQTDPKNTYDSRRPAEQPKAQEKGLGKEREKQRPSSEAWTNKERG
TSGSKSAFRRGSPEAKEQGAPQNDKNAAKPKPQPSHTSRLSSDPTRETDEAAFVPDYNES
DSDSNGSAKQDGSPGKKPRDGKEKPKEAAAPVQAPQPSRSQSPSSPSASPSESQGRSRSS
SASSADSQDSKKKRKKKDKKKHKKHKKHKKHKKHPGTESEAEKSQKHKHKKKKSKKSKEK
ENPKAKPVPV
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcgtgcactacaagttctcgtcgaagctcaactatgacacggtcaccttcgac
gggctgcacatctcgctctgcgacctcaagcgccagatcatgggccgcgagaagctcaag
gcggccgactgcgacctgcagatcaccaacgcccagaccaaagaagaatatactgatgat
aatgccctgattcccaagaactcatccgttattgtcagaagaattcctattggaggagta
aaatgtacaagcaaaacctatgtcataagtcgaactgatccagtgagtggaccttcaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagaccgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcacagtctggccac
gaatatgatcctatcaattacatgaagaaacccctgggaccgccaccaccgtcatacact
tgctttcgttgtggaaaacctggtcattatataaagatctgcccaaccaatggggacaaa
aactttgagtctgttcccaggattaagaagagtactggaattccacgaagtttcatgatg
gaagtgcaggatcctaatactaagggtgccatgctcaccaacacagggaaatacgctatt
cctactatagatgccgaggcttatgccatcgggaagaaagagaagccaccgttcttgcca
gaggaaccgtcttcttcctcagaggaagatgaccccattccagatgaattgttgtgtctg
atctgcaaggacataatgacggatgccgtagtgattccttgttgcggaaacagctactgt
gatgaatgtatccgaacatccttgctagaatcagaggaacatacctgtccaacttgtcat
caaacagatgtttctcctgataatttaattgccaacaaatttttacgccaggctgtaaat
aacttcaaaaatgaaacaggctacactaaaaggcttcgcaagcaggcccccccaccaaga
ccagcagttcagcggaatatgccttctgtgcccaggccaacaggctccaggcaacaggat
ccccttatcctcccagtcacttctgctcaggttcatgcctctgcatctccccccttatct
ctgcctcctggtcaagctccccctgcaacaagcatgttggccgtgaaccagtctgcctcc
acctccatcagtgatgtgcctacagcaatgtctctagcaattcatgctgagaagcccgga
ggacctttccgggagggtgatggtcttggatcagctgctgctcttgtgtcagcctccgat
cacccaaagctacattcctctttattaattaacactgtgctggaagagaagggctatcag
gttcctgtgcttggacagccagctttggctgggcagctgagttctcatgggcattcaata
cccactatgggtcagccaatgagaacaaatcctgtccgctctgcagctagtaggtcaggc
tgggagccaagttcaaaccgaggacgcccgcatagtgaccgtacacaaaggactcaggcc
ccaacactgccagcctcaacaccagtctttgtgcccgtgcctccacctcccctgtatcct
cctcctccccacgcacttcctcttccaccgggggtacctccaccacagtttcctcctcag
tttccacctggtcagcctccatcagctgggtacactgtcccccctccgggataccccccg
gctccagcaaacatatcaacaccatgggtaccaacaccagtaccaacggctcactcaaat
accatcccaacgacccaagcacctcctttatctagggaggagttttacagagagcaacgg
agacttaaagaggaggaaaagaaaaagtcaaagcttgatgagtttacaaatgattttgct
aaagaactgatggaatataaaaaaattcagaaggaacgcaggcgttcttattcccggtcc
aaatcgccgtatagtgcatcttcttactccagaagttcttacacctactctaagtcaaga
tctggctcatcccgctctcgctcgtactctcggtccttcagccgctcccattctcgctcc
tactcgaggtcgcccccgtacaaccggaggggcagaggcaagagccgtaattaccgctcc
aggtcaagatcacacggatatcaccgatcaaggtctaggtcacccccctacagaaggtat
cattctcggtccagatcgccagcgtacagaggccagtccccaaacaagcggcccggtcct
cagggagaaggggaacgggagtattttggtcgctaccgagaaatcccggtttatgacatg
aaggcatattatgggagatctgttgatatgagagagacctttgagaaggagcgataccgt
gattgggagacctacagagaatggtatgaaaaatattttaagggcttcccggctggagcc
cagcccagacctttgcttaacagagagaacttctctccagaacgatttggccctcctgga
ccaaggagggagaattccccctacattcggggtcgcagagatgattatcctggagggctc
gggcatcgtaaccgaaatctaggaggtggctacgctgaaaagctcccaggaagagagggc
cacaacatgaaagatgtgacaaaactgaaggacaaagaagccgacaatcctgcaggggat
gcgaaagggaacaggcacaagaaacaccggaaacgacggcggggagaagaaggggacggt
ttccctagcgctgacgtgttggaaggctcacggaagcctgctgctggcgaagagggcaga
ccggactccctctttgttcccccgagcagggatgacgctactcctgtccgggacgagccg
atggaagcggactcagttgcctttaagcccatctctgacaaggagaggaaagagaagccg
aagggaagggtggaaaagacaaagcagaaaacctccgagggggccgccaccaccaagaag
gaggtacaagtcaaaccagcgaaagcggcacctcaggagaaggcggaggctgaccgtgaa
agatccccacggactgaacctcctgccaaaaaggggaaggaagagttgccaaaggctgat
gggcccaaaccttcctcccagaaggatgagaagcctccaagcgctccccgtaaagtccac
ccccgaggcgcaaaagagcacccagaggccaagtccaccaaggaggagaaggccaagaag
gagcatcccaaggaagccaagcaggagaagccgtccagcaaggaggaaaaatccaagaaa
cccgctgacaaaaccaaatcggcagatgccaaacctgaaaagaggaagagaaaaatggag
gacaaagtggacaaggagcctgaaaccacgtcgctaaaggcttccaagcaagaagtcaca
gaacctaaaccgttgccaaaggggaagagtgacccggaagcagagaaaacggagaggacc
ccggagaaagaaaaaactgttttaccagttgttcctgcaaagaagatcaagctgaaccga
gaaactggcaaaaagattgccggtgccgagagcgtccctccggtgaaagaagcctcagcc
gagaagcctgagccggtggtgagcaaagcgaagcaagagaaaggcaaagggaaaatgagg
agaaaagtggcggcagccgatggatcaggttccacgctggtcgattacaccagtacaagc
tctgctggaggcagcccagtaaaaaagctggaagacaagctagacaccaagcgcaccgtc
atcaagaccctggaagaatacaacaacgacattactgcccctgccgaagatgtcatcatc
atgatccaggttccccagtccaagtgggataaggatgattttgactctgaggaggaagaa
gaacaagagaatgttaagtctgcacaagtctcttctgccattgggaagcctgccagcatc
atcaagagcgtcaacacgaagctgcccaatcctgtcaaacacaacgagaaggatcccgaa
cccctggagagaaattcgagagccacaaaagagcctggccgtgaaacttcacagcctgac
cccaaaacgtccaaaacagccgcatcaaatgagaaggggaagatcaaagacagggaccag
gccgcatccgatcgagacccttctgagaaaagaaagagtggggctcagccagagaaggag
cgttccgaacgcggaacagagcaaggaaatgtcaagagtgggtcttctcactcctccagg
gacagcagatcttcagacaaacatgattctgcccatggatccagcacaaaggacattact
cctagccgagagaagaagtcagatggggacagcagcagagaccattccagctccaagcga
agagaggaacggggtgggctgacccgaaagaaagcatcgccttcacgtagccgggagcca
gccccctccgcatccaagagcaagaccagggaggagcgaggggagcagcccaagaaggaa
aactgggacaccaagcggagcagttacagcccatccagggaccgaaggcagaccgaccca
aagaacacctacgactccaggcgtccagcagaacagcccaaggcccaagagaagggcttg
ggcaaggagagagagaagcagcgaccctcctcggaggcctggaccaataaagagaggggg
acatctggaagcaagtctgcattcagacggggctccccagaagccaaggaacaaggggct
ccccagaacgacaaaaatgctgccaagccaaagcctcagccgagccacacatcccggctc
tcttcggacccaacacgggaaaccgatgaggcggcttttgtcccagactacaacgaaagc
gacagtgacagcaacggttcagcaaaacaggatggctccccggggaaaaaaccccgagat
gggaaggagaagccaaaagaggctgcagcccccgtccaggccccccaacccagccggagc
cagagccccagcagccccagcgccagcccctcggagagccaaggccggagccgcagcagc
agcgccagctctgcagacagtcaggacagcaaaaagaagaggaagaagaaggacaagaag
aagcacaagaaacacaagaagcacaagaagcacaagaaacaccctggcaccgagtcagaa
gccgagaagagccaaaaacacaaacacaagaagaagaagtcgaagaagagcaaagagaag
gagaaccccaaagccaaacctgtcccagtctag
DBGET
integrated database retrieval system
