Crotalus tigris (Tiger rattlesnake): 120310941
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Entry
120310941 CDS
T08476
Symbol
ABCA3
Name
(RefSeq) ATP-binding cassette sub-family A member 3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120310941 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ctig02000
]
120310941 (ABCA3)
Transporters [BR:
ctig02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
120310941 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
RsgA_GTPase
AAA_23
AAA_22
DUF4162
AAA_30
AAA_29
AAA_15
SRP54
Motif
Other DBs
NCBI-GeneID:
120310941
NCBI-ProteinID:
XP_039205881
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MVVLRQFGLLLWKNYILQKRKILVTLIEVCLPLLFAAILIGLRHRVHSVNHPNATLYHSK
QVDRLPSFFHRWHSGVPWELAYVPSNNTAVESIAEAVEKALEINIKARGFPSEKEFEHYI
RFNNRSGNVLAGLVFENCVANSQDPLPLQVSYRLRFKYSPRNAPPSERTGLNPNLDRDWN
THYLFPLFQLPGPREAKSDDGGTPGYFREGFLAVQHVVDKAIIQYHVNNSTSSLLDRVTV
TVRRFPYPPYVNDLFLLAIQNQLPLLLMLSFTYTSLNIVRAVVHEKEKKLKEYMRMMGLS
NWLHWSAWFLLFFLFLLVSIFFVTILSCVKVSGQGAVLASSDPTLIFTFLVVFCISTVSF
SFMVSTFFSKANVAAAAGGFLYFFSYIPYFFISPRYDHMTHSQKLSSCLISNVAMAMGAQ
LIGRFEGKGTGLQWGNLMKAVSVDDNFTMAHVLGMLLLDSGIYGLVAWYMENVFPGEYGI
PQPWYFFVMPSYWCGSPQTVLGKEKEEEEDPEKALKSQFIEEEPSDLVSGVKIKHLSKVF
KVGSKTREAVKDLTLNMYEGQITVLLGHNGAGKTTTLSMLTGLYPPTSGQAYINGYEISQ
DMVLIRKSLGLCPQHDVLFDHMTVEEHLYFYSGLKGFPAEKCPGEITHILHILNLQEKRR
TLSKALSGGMKRKLSIAIALIGDSQVVMLDEPTSGMDPVSRRATWELLQQQRRTRTILLT
THFMDEADLLGDRIAIMAKGELQCCGSSLFLKHKYGAGYHMVMVKEPYCNLGEISHLIYH
YVPNASLESNAGAELSFILPNESTHKFEALFTELELRREELGIASYGASVTTMEEVFLRV
GKLVDSSMDIQATQLPALQYQHERRSNDWAMDDSSSMSGLTNLTDDSGTLITEDCSSIKL
NTGFYLCCQQFYAMFMKRAVYSWRNWKMVAAQFLVPLIFTAFALIAAKTFPGPQDSPLLK
LTLNPYGQTTVPFSVSQGSSLGERLAAQYKDVVGAQRQEPLEVVGNLEEYLISRASEEAG
AFNEYHIAAASFQETSKQMEVTALFNNQAFHSPATALLLVDNALLRLIAGPNASITVANY
PQPRNMTETAKDQLMESQTGFAIAINLLYGMASLSSTFALLLVSERAIKAKHVQFVSGVY
MVNFWLSALLWDLVNFLIPCTLILVIFQAFDVKAFTEDNHLVDIMQIFLLYGWAIIPLMY
LLSFFFSVAATAYTRLTIFNIFSGTATFLAVVIMSIPELGMVDLSNTLDKVFLILPNYCL
GQSISKFYQNYEFIQFCTSSFESLVICKVFNISYQTNYFAWESPGIGKYLTAMAAQGLSF
LLLLFLIETNLLWRMRTIVCDIRRRRKWVMLLNQVPVLPEDRDVADERKKVLESPTASIS
SLNSPLVIKELTKVYSSRDSCLAVDRISLAVSKGECFGLLGFNGAGKTTTFKMLTGDESI
TSGDAYVDGHSILANIKKVQQRIGYCPQFDALLDHMTGRETLSMYARLRGIPERYIGSCV
ENMLRGLLLEPYANKLIRTFSGGNKRKLSAGISLIGGPPVVFLDEPSTGMDPVARRLLWD
AVTRTRECGKSIIITSHSMEECEALCTRLAIMVNGQFKCLGSPQHLKSKFGSGYTLVAKT
HCDEEGHVEDFKAFVEKTFPESILKHEHQGMVHYHLTNKNLSWAQVFGTLEKAKVKYCIE
DYSVSQISLEQVFMSFTRFQHYTEDREK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggttgtgttacggcagtttgggcttcttctctggaagaattacatcttgcagaagcgg
aaaattttggtgacgctgattgaggtttgtctccccttgttgtttgctgccatcctgatt
ggcctgcgccatcgtgtccactcagtcaaccaccccaacgccaccttataccacagcaag
caggtggacaggctgcccagtttcttccatcgctggcattcgggcgtcccctgggaacta
gcgtacgtcccctccaacaacacagccgtggaaagcattgccgaggcggtggagaaggcc
ttggagatcaatatcaaagcgcgagggtttccatctgaaaaggagtttgaacactacatc
aggttcaataaccgttcgggcaacgtactggcgggactggtttttgagaactgtgtggct
aacagccaggatcccttgccgctccaggttagttaccggctacgtttcaaatatagccct
aggaacgctcctccaagtgaaaggacaggattgaaccccaacttggatcgagactggaat
acccactacctcttcccactgttccagttaccaggacccagagaagcaaaaagtgatgat
ggaggcacaccagggtacttccgtgaaggcttccttgcagtgcaacatgtggtggataag
gccatcattcagtaccatgtcaacaactctacttccagtctgctggatcgggtgactgtg
accgttcggcgctttccttatcctccttacgtcaatgacctcttccttctggctattcag
aaccagcttcccttgttactcatgctgagcttcacctacacctccctcaatattgtccgc
gccgtagtgcatgagaaggagaagaagctgaaggagtacatgcgcatgatgggactcagt
aactggctacactggagcgcctggttcctcctgttcttccttttcctcttagtgtccatc
ttctttgtgaccatcctctcctgtgtcaaggtgagtggacagggagctgtgctggccagc
agtgacccaactctgatcttcactttcctagtggtgttttgcatctcaaccgtctccttc
agcttcatggtcagcaccttcttctcaaaagcaaacgtagccgcggctgcgggaggcttc
ctctattttttctcctacattccgtacttttttatctccccgcgctacgaccacatgacc
cacagccagaagctctcatcctgcctcatctccaacgtcgccatggctatgggggcacag
ctgatcggcaggtttgaaggaaaaggcacagggctacagtggggaaacttgatgaaggct
gtcagtgtagacgataacttcaccatggctcacgtcctgggtatgcttctcctggattct
gggatctatggcttggtggcttggtacatggagaatgtgtttcctggagaatatggcatc
ccacagccctggtacttctttgtcatgccttcttactggtgtggcagcccccagactgtt
ttggggaaagagaaagaagaggaggaagacccagagaaggccttgaaaagtcaattcata
gaagaggagccttcagacttagtgtcaggcgtaaaaatcaagcatctttccaaggtgttc
aaagtgggaagcaaaactagagaagctgtgaaggacctgactcttaatatgtatgaagga
caaatcaccgtccttctgggacacaacggggctgggaaaaccaccactttgtccatgctg
acagggttgtatcctccaacaagcggacaggcatacatcaacggttatgaaatatcccaa
gacatggttctcatccggaagagtctgggtctttgtcctcagcacgatgttctctttgac
cacatgacggtagaagagcacctttacttctactctgggctgaaaggatttcctgctgaa
aaatgcccaggggagatcacccatatccttcacatcctcaacttacaagagaaacgtagg
actttgtcgaaggccctctctggagggatgaaacgcaagctctccattgccattgcgctc
attggggactcccaggtggtgatgctggatgagcctacctcaggcatggaccccgtttca
cggcgagccacgtgggagctcctgcagcagcagcgaagaacccgcaccatcttgctcacc
acccacttcatggatgaggcagacctgctgggcgaccgcattgccattatggccaagggg
gaactccagtgctgtggatcgtccctctttctcaaacacaaatatggtgctgggtaccac
atggtgatggtgaaagagccctattgtaatcttggagagatctcccacctcatctatcat
tatgtccccaacgcctctctggaaagcaatgcgggagcagaactgtccttcatcctaccc
aatgagagcacacacaaatttgaggctctgttcacagagctggaattacgccgggaagaa
ctgggcattgccagttatggagcttcagttactacaatggaagaggtcttccttagagtt
ggcaagcttgtagactccagcatggatatccaagccacccagttgccagctttgcagtac
cagcatgaacggcgatccaacgactgggccatggatgattccagcagcatgagtggcctg
actaacctgaccgacgacagcggcactctcatcaccgaagattgctccagcattaagctg
aacacagggttctacctctgctgccaacaattctacgccatgttcatgaagagggctgtg
tacagctggcgcaactggaagatggtagcagcccagtttttggtgcctctcattttcact
gcttttgccttgatcgccgcgaagaccttcccgggaccacaagactctccattgttgaag
ctgaccttaaatccatacggccagaccacagtgcctttctccgtctcccaaggctccagt
ctgggcgagaggctggcagcacagtacaaggatgtggtgggtgcccagcgccaggagcca
ttggaggtggtagggaacctggaggaatacctgatttctcgagcatccgaagaagccgga
gcctttaatgagtaccacatagcagcagcttctttccaagagacctcaaaacagatggaa
gtaaccgctcttttcaacaaccaagcctttcattctcccgccaccgcgttgctactggtg
gacaacgccttgttgaggctaatagctggaccaaacgcctccatcacagttgccaactat
ccacaacctcgcaacatgaccgaaacagcaaaagaccagctcatggaaagccagacgggt
tttgcgattgccatcaacttgctctatggaatggcctctttgtccagcacttttgcactc
cttctggtaagcgagagagccatcaaagccaagcacgtgcagtttgtcagcggtgtttac
atggtgaacttttggctctctgcgcttctgtgggacctcgtcaacttccttataccctgc
accctcatcctggtgatcttccaagcctttgacgtcaaagcattcaccgaggacaaccat
cttgtggatataatgcagatatttctcctgtatggctgggccattatccccctcatgtac
ttgctcagcttcttcttttcagtagcagccacagcctacacccgcctcaccattttcaac
atcttctccggcacagccacgttcttggcagtcgtcatcatgagcattcctgagcttggc
atggtggatctgtctaacacattagataaagtcttcctaatcctgcccaactactgcttg
ggacaaagcatcagcaagttctaccagaattatgagttcattcagttctgcacttcttct
tttgaatccttggtcatctgtaaagtgtttaatatctcctaccagaccaattactttgct
tgggaaagcccaggcattggaaaatacttgacagctatggcagcccaagggctctccttc
cttctcctgctctttctcattgagactaacctcctctggagaatgaggaccattgtctgc
gacatacgacggaggcggaaatgggttatgctgctaaaccaagttccggtgcttccagaa
gaccgggatgttgctgatgagagaaagaaggtgctggaatcaccaacagcatccatttct
tcattgaatagtcctcttgtgattaaggagcttaccaaggtctacagtagcagggattct
tgtctggctgtggacagaatttctcttgcagtcagcaagggagaatgttttggtcttctg
ggtttcaatggggcaggaaaaacaaccaccttcaagatgctaacgggagacgagagcatc
acttcaggagatgcctatgtggatggacacagcatcctggccaatatcaaaaaggtccag
cagcggattggctactgtccccaatttgatgcacttttggatcacatgacagggagagag
accttgagcatgtacgcccgactgcggggcatccctgaacgctacatcggcagctgtgtg
gagaacatgcttcgtgggttgctcttagaaccttatgccaacaaactcatccgcacattc
agtggtgggaacaagcggaaattgagtgcaggaatttctctcattggtggacctcctgtg
gtgttcctggatgaaccttccaccggcatggaccctgttgccaggcgcctattatgggat
gcagtcactcggacacgggagtgtgggaagtccatcattatcacatctcacagcatggaa
gaatgtgaggctctctgcaccaggctggccatcatggtcaatgggcagttcaagtgcctg
ggtagccctcagcatctgaagagcaagtttggcagtggctatacgctggtggccaagacc
cactgcgatgaagaaggccacgtagaagacttcaaggcctttgtggagaagacatttccc
gagagcatcctgaagcatgaacaccaggggatggtccattaccacctcaccaataagaac
ctcagttgggcacaggtgtttgggacacttgagaaagccaaagtgaagtactgcatagaa
gattactctgtaagccaaatctccttggagcaagtcttcatgagcttcacgcgtttccag
cattacacggaagatcgtgagaaatga
DBGET
integrated database retrieval system
