Crotalus tigris (Tiger rattlesnake): 120311141
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Entry
120311141 CDS
T08476
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120311141 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120311141 (NUP54)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120311141 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup54
Nup54_C
Motif
Other DBs
NCBI-GeneID:
120311141
NCBI-ProteinID:
XP_039206249
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MAFNFGAAAGAAAAPNPAGAFGGFGTTTTTAPGSTFSFSTPVNTGLFGATQNKTFGFGTS
FGTAASTGTGLGTGLGFGGFNPQQQQPTLGGLFSQPAQAPAQSNHLIHTASALSAPTLLG
DERDAILAKWNQLQAFWGTGKGYFNNNIAPVEFTQENPFCRFKAVGYSCMPNYKDEDGLV
ALVFNKKETEIRGQQQQLVESLHKILGSNQTLTVNVEGLKTMPDEQTEIVIYVVERSPNG
TSRRVPATTLYAHFEQINIKAQLQQLGVTLTMARTELSPAQVKQLLQHPPAGVDPIIWEQ
AKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQSRLDIISEDISELQKNQTTTMAK
IAQYKRKLMDLSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPTQFKGRL
NELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISIVKDDLEDIKLI
EHGLNDSIPVRGGVFS
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaacttcggggcggctgctggcgccgcggccgccccaaaccccgcgggagcc
tttgggggctttggaaccaccaccaccaccgcaccggggtctacctttagtttctcaacg
ccggtcaacacagggctgtttggagctacccagaacaaaacttttggttttggtaccagc
tttggaacagcggcaagtacaggaactgggcttggcaccggcttgggatttggtggcttc
aaccctcagcagcagcaaccaacactcggaggtctcttcagccaaccggctcaagccccc
gcacagtccaatcacctgatccacacagctagcgcgctttccgcccccaccctcttggga
gatgagcgagatgccattttggccaagtggaatcagctgcaggcattttggggcacaggc
aaagggtatttcaacaacaacattgccccggtggaatttacgcaggagaatccattctgc
agatttaaggctgtgggctacagctgcatgcccaactacaaggacgaagatggcttggtg
gcgctagtcttcaataaaaaagaaaccgagatccgtggtcagcagcagcaacttgtggag
tcgctgcacaaaatcttgggttcaaatcagacgctgacggtcaacgtagaaggattaaag
accatgcccgatgaacaaacagaaatcgtgatctatgtggttgagcggtcgcccaacggc
acttccaggcgcgttccagccaccaccctctatgcgcactttgaacaaatcaacatcaaa
gcccagctgcagcagcttggcgtgaccctcaccatggccaggacggagctctccccagca
caggtgaagcagttgctgcagcatcctcctgcaggtgttgatccgatcatttgggaacag
gccaaagtggacaatccggatcctgaaaagctgattccagtcccaatggtcggcttcaag
gaactcttgcggagattgaaagttcaagaccaaatgacaaagcaacatcaaagccgattg
gacatcatatcagaagatataagcgagcttcaaaaaaaccaaactaccaccatggccaaa
attgctcagtacaaaaggaagctaatggatctttcccatcgaactttgcaggtgctcatc
aagcaggagatccagaggaaaagcgggtatgccatccaggcggatgaagagcagctccgg
gtgcagctggatacgattcagtgcgaactcaacgcccctacccagttcaagggccgtttg
aacgagctgatgtcacagatcagaatgcagaatcactttggagcggtcagatctgaggag
agatactatattgatgccgatctcttgcgggaaatcaaacagcatttgaagcagcagcaa
gaaggactaagtcacctgatcagtattgtaaaagatgacctggaagacataaagctgata
gaacatggcttaaatgacagcattccggttagagggggcgtcttcagttga
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integrated database retrieval system
