Crotalus tigris (Tiger rattlesnake): 120311646
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Entry
120311646 CDS
T08476
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120311646 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctig01009
]
120311646 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120311646 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
ctig03029
]
120311646 (RB1CC1)
Protein phosphatases and associated proteins [BR:
ctig01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120311646 (RB1CC1)
Membrane trafficking [BR:
ctig04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120311646 (RB1CC1)
Mitochondrial biogenesis [BR:
ctig03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120311646 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Jag_N
Motif
Other DBs
NCBI-GeneID:
120311646
NCBI-ProteinID:
XP_039207301
LinkDB
All DBs
Position
Unknown
AA seq
1596 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKQAIQNKYRIAIQYQVLVVNGGECMAADRKVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFLAENEMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEIAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTYSYQKLLFRFENAYSSYLQ
SIDDIKLKLTHLGAAVSIMAKIPLLECLTRHSYRDCLERMDSSTDHGGTESEDTENEKSA
EVMLSPDTLKMNKQLLIASFCKSVEHPTSDDPDFEKLNENREASHYAVQDRDLSVELNEN
DLPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLADCRQTIAKLDNQNM
KAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHANQ
LMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTEL
LERVKIVEKLSNVPQMYCLAVVEVVRRKMFVKHYREWAGALVKDGKHLYDAEKAKRESFG
KLFRKSFLRNRLFRGLDAWPPSFCTRKPRRFDGELPDISLSDLQFLQSFCPSEVQPLLRV
PILCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSITTPRMENT
TGTTIATSPKTPSPLSLQGPLCPSVCPPAPLEELSPDSIDAHTFDFETIAHPNIEQSLKQ
GSLDLDSLAESPESDFMSAVNEFIIEENPSSPNVISDPQSPEMMVESLYSSVINAIDSRR
MQDPNICVKDGVLENPVLNVYMDKCRDVAQESRLNLMNIKEDLYHFRTFVKKEQCNFSSS
LKCTSVEIRNMIEKVKLSLEKSLKDKHQKELQSIKTEYESKINILVEDSEENKKNIAKLN
CDLKELEEILHDKDNEFEIVKNEKEAVVFLQNEKDQKLIEVECQMKKLYHEIKELTESRE
RVLESLKKLNVENEGKLQLLKAECQTMEQDHLKELESNLHVRHMQEFEELIAKHNDCLEK
LKKEHQHQLEKMQESHAADVYEKEQQIEELKIKVSELSDWRCKLEVELALKEAEADEMKV
LIEANKTQQQSNLRTLVNKETEMLRKETDKLKHIIQVSNDEYQVGLADLRTLITIEKDHC
ISELIDRHEGEANLLRIELDKTTSLHQKALEAEKNLEEQIKELQGKLELEMNAVQRQKEE
LLALCEQQKKYEDTIEKLVEEKKLLIATHEQDRKEMVQKLSCEKEDAVQNALKEFELQRD
AVEKELLEKIQQLEMQVNQSSFESSASSLVAELQEKLQEEKVKFLEQLEEYEKRKNEEMQ
NIRTSLTAEQQTTFNTVLIREKLKKENIINDLSDKLKLIKQQQEKDKDLIESLSEDRARL
LEEKKKLEEEVNKLKNSNLVSSTCLPFTLEPSGACAADFTSETEHLSSDTAEEGKNDSTL
ETSMMTVNENVQMLSEEKQRIMMLEKTLQLKEEENKRLNQRLMSQSMSSVSLRHSEKIAI
RDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGTSRRPWVLGK
VMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4791 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggtcaacactggaactacccttacctttgatacagaactt
gcagtacagaatgtggctgatcttaaacaagcaatccaaaacaaatacaggatagccatt
cagtatcaggtactggttgtcaatggtggcgaatgtatggcagctgacagaaaagtctgt
agttacagtgctggaacggatacaaacccaattttcctcttcaataaagaaatgatcttg
tgtgaacgtcctccagctatacctaaaacaacatttttagcagaaaatgagatggaaata
aaagttgaagaatcccttatgatgcctgcagtttttcacacagtagcttcacgaacacag
cttgctgtggaaatgtatgaaatagccaaaaaactttgctccttctgtgaaggcctcgtt
catgatgaacatcttcagcaccaaggctgggctgctataatggcaaatttggaagattgt
acatattcttatcaaaaactgcttttcagatttgaaaatgcatattcaagttacctgcaa
tccatagatgatattaaactgaaacttacacacttaggggctgctgtttctattatggcc
aagatcccattgctggagtgcctaactagacatagttacagggactgtttggaacgaatg
gattcttccactgatcatggaggaaccgaaagcgaagacactgaaaatgagaagtcggct
gaagttatgctttctcctgatacacttaagatgaacaaacaattattgatagcgtcattt
tgcaagtcggtggaacatccaacctcagatgatccagattttgaaaaattgaatgaaaat
agggaagctagtcactatgcagtccaagacagagatctttcagtggagcttaacgaaaat
gatctgccttcttttaatgtttcacttttagactggataaatgttcaagatagacctaat
gatgttgagtccttggtcaggaaatgttttgattccatgagcagacttgatccaagaatt
attcagccttttttggcagactgtagacagacgattgccaaattagataatcagaacatg
aaggctattaagggactggaggataggctttatgcgctggaccagatgatagctagctgc
agcaggcttgttaatgaacaaaaagaacttgctcagggatttttggctaatcagaagaga
gcagagaacttgaaagatccttctgtactaccagacttgtgcttgagccatgcaaatcaa
ctgatgatcatgttaactaaccacaggaaacttttagatattaagcaaaaatgtactact
gccaaacaagaacttgcaaataatttacaagtccgactgaagtggtgctgcttcgtcatg
cttcatgctgaccaagatggagagaaactacaagcattgcttcgccttgtaacagagctg
ctagaaagagtgaaaattgtagaaaagctcagtaatgtcccacagatgtactgtttggca
gttgttgaagttgtaagaagaaaaatgtttgtgaaacactacagagagtgggctggtgca
ttagtaaaagatggtaaacatctttatgatgcagaaaaagccaaaagggaatcttttgga
aaattatttaggaaatctttcttaagaaatcgtttgttcaggggccttgatgcctggcca
ccatccttttgtactcgaaaacctcgcagatttgatggtgaacttcctgatatttcatta
tcagatttgcagtttcttcaatccttttgtccttcagaagtacaaccattactcagggta
cccatactttgtgattttgaacctctccaccagcatgtacttgctttacataaccttgtc
aaagcagcacaaagtttggatgaaatgtcccagaccattacggatttgctgaatgaacaa
aaggcttccaacagtcaagcctcaccacaatctatcactacgccaagaatggaaaataca
acaggaacaacaattgctacctctcctaaaactccatcacctctcagtcttcagggtcct
ctttgcccttctgtgtgtcctccagctcctttagaagaattgtctccagacagtattgat
gctcacacatttgattttgaaacaattgcccacccaaacatagagcaatctcttaaacaa
ggatctttagatttggactcattggccgaaagtccagaatccgattttatgtctgcagtg
aatgagtttataatagaagaaaatccatcatctccaaatgtgataagtgatcctcaaagt
ccagaaatgatggtagagtccctctattcctcagttatcaatgcaatagatagtaggagg
atgcaagacccaaacatatgtgtaaaagatggagttttagaaaatcctgttctaaatgtt
tacatggacaaatgcagagatgttgcccaagaatctcggttaaatttaatgaatatcaaa
gaagacctttaccactttagaacatttgtaaaaaaagaacagtgtaacttttcttcttct
ttaaaatgtacttcagtagaaataaggaatatgatagagaaagtcaaactttctcttgaa
aaatctttaaaggataagcatcaaaaagagctacagtctataaaaactgaatatgaaagt
aaaataaatattttagttgaagatagtgaagaaaacaaaaaaaacattgctaaattaaat
tgtgacttaaaagaacttgaagaaattttacatgacaaagataatgaatttgaaatagta
aagaatgagaaggaagcagttgtgttcttacaaaatgaaaaagaccagaaattgattgaa
gtggaatgccaaatgaagaagctgtatcatgaaattaaggaactgacagagtcacgtgaa
agagtattagaaagtttgaaaaaactaaacgttgaaaatgagggaaaactgcaacttttg
aaagcagaatgtcaaactatggagcaagatcacctaaaggaattggaatctaatctacat
gttagacatatgcaagaatttgaagaattaatagccaaacacaatgattgtttagagaag
ttaaaaaaagaacatcaacaccaacttgaaaaaatgcaggaatctcatgctgctgatgtc
tatgaaaaagaacaacagattgaggaattaaagattaaggtttctgaattatctgactgg
agatgtaagctcgaagttgaacttgcattgaaagaagcagaagcagatgaaatgaaagta
cttattgaagcaaacaaaactcagcagcaaagtaatctcagaacccttgttaacaaagaa
actgaaatgctaagaaaagagactgataaattaaagcatataattcaagttagtaatgat
gaatatcaggtaggtttagctgatctgaggactttaataacaattgagaaagatcactgc
atttcagaattaattgacaggcatgaaggagaagcaaatttgcttagaatagaattggat
aaaacaacctccttgcatcagaaagcactggaagcagaaaaaaacctggaagaacaaatt
aaagaattgcaaggtaagctggaattagaaatgaatgctgtacagagacaaaaagaagag
cttttagctttgtgtgaacagcagaagaaatatgaagacaccattgagaaacttgtagaa
gaaaagaaactattaatagctacccatgagcaagacaggaaagagatggtacagaaactc
agttgtgaaaaagaagatgcagtacaaaatgcccttaaagaatttgaattacagagggat
gctgttgaaaaagaacttttggaaaaaatccagcaacttgagatgcaagttaatcagagt
tcatttgaatcgtctgcttcaagcttggttgcagagcttcaagaaaaactccaggaagag
aaagtgaagtttttggaacagcttgaagaatatgagaaaagaaaaaatgaagaaatgcaa
aacattcgaacatcactcactgcagagcagcagactacatttaatactgttctaataaga
gaaaagctgaaaaaggaaaatataatcaatgatcttagcgacaaattgaaattgataaaa
cagcagcaagaaaaagacaaggatctgattgaaagtctttctgaagatcgcgctcgttta
cttgaagagaagaagaaacttgaagaagaagttaataaactgaaaaatagcaatcttgtt
tcatcaacatgcttgccttttactctggaaccttctggagcttgtgcagctgatttcaca
tcagaaactgaacatttgagttctgatacagcagaagaaggaaaaaatgattccacacta
gaaactagcatgatgactgtaaatgaaaatgtccagatgttgtctgaagaaaaacagagg
ataatgatgttagaaaaaacactgcagttgaaagaggaggaaaataaaaggctcaatcaa
agattgatgtctcaaagcatgtcttcagtttctctaagacactctgaaaaaattgctatc
agagattttcaggttggtgatttggttctcataatcttggatgaacgtcatgacaactat
gtattattcactgttagcccaactttgtattttttacactcagaatctcttgcggcacta
gatctcaaaccaggtgagtgtgcttctggaacatctcgaagaccttgggtgttagggaaa
gtaatggaaaaagaatattgtcaggcaaaaaaggcacaaaaccgattcaaagttcctctg
ggtacaaaattctacagagtaaaagcagtaccatggaataagaaagtataa
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integrated database retrieval system
