Crotalus tigris (Tiger rattlesnake): 120311799
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Entry
120311799 CDS
T08476
Symbol
PNN
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03013
Nucleocytoplasmic transport
ctig03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120311799 (PNN)
03015 mRNA surveillance pathway
120311799 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120311799 (PNN)
03041 Spliceosome [BR:
ctig03041
]
120311799 (PNN)
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120311799 (PNN)
Spliceosome [BR:
ctig03041
]
Complex C
Other components
EJC/TREX
120311799 (PNN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
120311799
NCBI-ProteinID:
XP_039207718
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MAVAVRALQEQLEKAKESLKHVDENIRKLTGRDPNDVRPAQGRLLAITGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGSTNRLAGERRTRRESRHESDAEDDDVKKPALQSSVVATS
KERTRRDLIQDQTMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYKPGRMCPASQKMFDDSQKKLNALFENRRTEFAEQINKMEARPRRQSVKEKEHQEVQK
EEKKEDQNKEQEVGKVVQQVEEMETGNKSNDIEMEEVREEKEVGASHSDGEIEQEEEEQK
EEMEVKVEEEAEVKENDRQTDNPTEEVEVVKGESEGIQPIDGEQDVMEINETDCTEPLET
EPLENEISTEVEPEVECNAQPEQEGLIVVLEKEEPGKPEVDAEPEESEEKEPESIPVSEA
EVQPQSESVIWPQPLPLLESTQDQAPQLDKEALVSEKLPEIQADQVQAVSVEIKNKIRSR
SRGRARNKTSKSRSRSTSSSTSSTSSTSSSSGSSSSSGTSSSRSSSSSSSSSGTSSREST
SSSSSSESRSRSRGRGHNRDRKHRRSLERKRRDNSGVDRSHKSSKGSRRDAKGSKDKSSR
SDRKRSISESSWSGKRTSRNERDRKSDRKDKRR
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggtagctgtgcgggctctacaagaacagctggagaaagccaaggaaagcctcaag
cacgtcgatgaaaatatccgcaaactcacggggcgggaccccaacgatgtgcggcccgct
caaggtagattgttggccatcacaggccctggtggaggtagggggcgcggaagcctattg
ctgaggcgtggattctcggatagcggcggaggacccccagccaaacagagggatctagaa
gggtcgacgaatagattggctggtgaacgtcggacaaggagagaatcacgccatgaaagc
gacgcagaggatgatgatgttaaaaaaccagcgttgcagtcctctgttgttgctacctcc
aaagagcgaacacgccgagaccttattcaagatcaaactatggatgaaaaggggaaacaa
aggaatcggcgtatatttggcctgttgatgggtactcttcagaagtttaaacaagaatca
acagttgctactgagaggcaaaaaagaagacaagaaattgagcagaaacttgaagtgcag
gcagaagaagagagaaagcaggttgaaaatgaaagacgagaactctttgaggaaagacgt
gctaaacaaacagaactacgactattggaacaaaaagttgaacttgctcagttgcaagaa
gaatggaatgaacataatgccaaaataattaaatatataagaacgaagacaaaacctcat
ttgttctataaacctggcagaatgtgccctgcttcccagaagatgtttgatgattcccaa
aaaaagttaaatgcactgtttgaaaatagacgcactgaatttgctgagcaaattaataaa
atggaagccaggcccagacgacagtctgtgaaggaaaaagaacaccaggaggtacagaaa
gaagaaaagaaggaagaccagaacaaggagcaggaagtgggtaaggtggtacagcaggtg
gaggagatggagacaggtaataagagcaatgatatagaaatggaagaggtaagggaagaa
aaggaggtaggtgctagtcatagtgatggggagatagaacaggaagaggaagagcaaaaa
gaggaaatggaagttaaagtagaagaggaagctgaagttaaagagaatgacaggcagaca
gataacccaactgaggaagttgaggtagtgaagggagaaagtgaaggtattcagccaata
gatggtgagcaggatgtaatggaaatcaatgagacagattgtacagagccattagaaaca
gagccgttagaaaatgaaattagcacagaggttgaaccagaagtggaatgtaatgctcag
ccagaacaggaagggctcattgtggtccttgaaaaagaggaacccggcaagccagaagtt
gatgctgaaccagaggagtcagaagagaaggagcctgaatccattccagtatcggaggct
gaggtccagcctcagtcagagtctgtgatttggccacagcctttgccacttttggaatcc
actcaagaccaagcaccacaattagataaagaagctctagtgtctgaaaagctgcctgaa
atacaggcagatcaagtgcaggcagtaagtgtagaaattaaaaacaaaattaggagcaga
agcaggggtagagcaagaaacaaaaccagtaagagtcgaagtcggagtactagtagtagc
actagtagtactagttctacaagtagtagcagtgggagcagttctagcagtggtacaagc
agtagtcggagcagttccagcagcagcagtagcagtggtactagtagtcgagaaagtact
agtagttctagcagcagtgagagtagaagtcgaagcagggggcgaggacataatagagat
agaaagcatagaaggagtttggaacggaagcgaagggacaattcaggagtagatagaagt
cacaagtcttcaaaaggtagcagaagagatgcaaaaggatcaaaggataaaagctcaagg
tcggacagaaaaaggtctatatcagaaagtagttggtcaggcaaaaggacttcacggaat
gaaagagaccgtaaatcagacaggaaagacaaaaggcgttaa
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