Crotalus tigris (Tiger rattlesnake): 120311832
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Entry
120311832 CDS
T08476
Symbol
NPAS3
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120311832 (NPAS3)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
120311832 (NPAS3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
120311832
NCBI-ProteinID:
XP_039207788
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAGGVPAGPGVGRASTAANGNPQNVQGITSYQQRITVQHPLPNQS
ECRKIYRYDGIYCESTYQKTSLDMPMARHHSWVTPPSLQALRKEKSRDAARSRRGKENFE
FYELAKLLPLPAAITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRMEGPPPNTSVKGI
QIWKSEVCMRKTPCEVIGAQRRRSPSALATEVFESHLGSHILQSLDGFVFALNQEGKFLY
ISETVSIYLGLSQVELTGSSVFDYVHPGDHVEMAEQLGMKLPPGRGLLSQGTAEDGASSA
SSSSQSETPEPDTDTAVTLSVAKFCAVACPVHQMTLQESVETTSPSLLSIDNNLERSFFI
RMKSTLTKRGVHIKSSGYKVIHITGRLRLRVSLSHGRTVPSQIMGLVVVAHALPPPTINE
VRIDCHMFVTRVNMDLNIIYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRHSHLDL
LNKGQCVTKYYRWMQKSGGYIWIQSSATIAINAKNANEKNIIWVNYLLSNPEYKDTPMDI
AQLPHLPEKTSESSETSDSESDSKDNSEDNENSKSDEKGNHSENSEDPESDRKKSGNQSD
NEMNCNDDGNSSSNQDSRDSDDSFENSDFENQKAPEDSFGTLGSMQIKVERYVESESDLR
LQNCESLTSDSAKDSDSAGEVNAQSSSKHQKRKKRRKKQKGGSVARRRLSSTSSPNGLDS
TLVDQPQLLSPPNSASVLKIKTEISEPINFDNDSSIWNYPPNREISRNESPYSMTKPPNS
EHFPSPQTSSSLHVSIPDSVLTPPGTENPANRKSQFSTSSNSALAPVSSDPLSPPLSASP
RDKHPGGPSTSNSLLYTGDLEALQRLQAGNVVLPLVHRVTGTLAATSTAAQRVYTTGTIR
YAPAEVTLAMQGNLLPNTHAVNFVDVNSPSFGLDPKTPMEMLYHHVHRLNMSGPFGSAVS
AASLTQMPAGNVFTTAEGLFSTLPFPVYSNGIHAAQTLERKED
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgatccggatcttcccggatttcagcgtgcaggtgactgcagctgcggccgggggagtg
ccagccggcccgggcgtggggagagccagtaccgcagctaacgggaatccgcaaaacgtc
cagggcattacttcctaccaacaacgaataactgtccagcatcctctacccaaccagtca
gaatgtaggaaaatctacagatatgacggaatctactgtgaatctacctaccagaaaaca
agtctggacatgcccatggcaagacaccattcttgggttacccctcccagcttacaagcc
ttgagaaaggaaaaatcccgagatgctgctcgttctcgaagaggaaaagaaaattttgaa
ttctatgagttggccaaattgttgccactccctgctgccattactagccagcttgacaag
gcatctatcatccgattaacaattagctatttgaagatgagggactttgctaatcaaggg
gatcctccatggaacctgcgtatggaaggaccaccacccaacacatcagtgaaagggata
caaatatggaaatctgaggtctgcatgagaaagacaccatgtgaagttataggtgcccag
cgcaggagaagccccagtgcccttgccactgaagtatttgagtcacatttgggaagtcac
attttacagtcactggatggatttgtatttgcactaaaccaagagggaaagtttttgtac
atttcggaaacagtctccatttatcttggcctctcccaagtggaactgacaggcagcagt
gtgtttgactatgtccatcctggtgaccatgtggagatggctgagcagctgggcatgaaa
cttccccctggacgaggccttctctcgcagggaacagccgaggatggagccagctcagca
tcttcatcttctcagtctgagacccctgagccagatacagatacagctgttacacttagt
gtggccaaattttgtgctgtggcttgtccagtccaccaaatgactcttcaggaatcggtg
gaaactacaagtccaagcctactttcaatagacaacaatctagagcgttcttttttcatt
cggatgaaatccacgttgaccaagcgaggtgtacacataaaatcttctggatataaggtg
atccatataacaggaaggttacgactaagagtgtcgttgtctcatgggcggactgtccca
agccaaatcatggggcttgttgttgttgctcatgccctgccccctcctacaatcaatgaa
gtcagaattgactgccacatgtttgttacccgagtaaacatggacctcaatatcatttac
tgtgaaaataggattagcgattacatggatctgacccctgtagatattgtagggaaaaga
tgttaccacttcattcatgctgaagatgtggaagggatcaggcacagtcatttagacttg
ctgaacaagggtcagtgtgttacaaaatactaccgttggatgcagaaaagtgggggctat
atttggatacagtctagtgccactatcgctattaatgccaagaatgcaaatgagaagaac
atcatctgggttaattaccttctgagcaatccagaatataaggacactccaatggatatt
gcacaacttcctcacttgccagagaaaacctctgaatcctctgagacctctgattctgaa
tcagattcaaaggataactcagaggacaatgagaattcaaagtcggatgaaaaaggaaac
cattcagaaaacagcgaagatcccgaatcagataggaagaagtctggcaatcagtcagat
aatgaaatgaactgtaatgatgatgggaacagctccagcaaccaggacagcagagatagt
gatgacagctttgagaattctgactttgagaatcaaaaggcccctgaagatagctttggc
actcttggttctatgcagattaaggtggagcgctatgtggagagtgagtcagacttgcgg
ttacagaactgtgaatcattgacctcggacagtgccaaggactcagacagcgcaggagaa
gtaaatgcccagtcttccagcaagcatcaaaaaaggaaaaagagaaggaaaaagcagaaa
ggaggcagcgtggcccggagaaggctctcaagcacctcaagcccaaatgggcttgactca
acattggtagatcagccccagttgctctcaccgccaaacagtgcctcagtgctcaaaatc
aaaacagagatctcagaacctatcaattttgataacgatagcagtatttggaattaccca
cccaacagggaaatctcaaggaatgaatcaccttacagtatgaccaagccccccaactca
gagcacttcccttccccccaaaccagcagtagtttacatgtctccattccagactctgtt
ctaactccgccagggacagaaaatcctgccaatcgcaagtctcagttcagcacctcatcc
aactctgccttggctcctgtatcctctgaccctttgtccccacctctgtcagcatctcca
cgggacaagcatccgggaggccccagcacttccaattcattactgtatacgggggacctg
gaagccctacagagattgcaagcaggcaatgtggtcctccctttggttcacagggtaact
ggaacccttgctgccaccagcacggctgctcagagggtctataccactggcacgatccgg
tatgccccagctgaagttactttagccatgcagggcaatctcctccccaatactcatgct
gttaactttgtggacgttaacagccctagttttggcttagatcctaaaacaccaatggaa
atgctctaccaccacgtccaccgactcaatatgtcaggaccgtttggaagtgctgtgagc
gcggccagcctgacccaaatgcctgcagggaatgtgttcacaactgccgaaggactgttc
tcaactcttccgtttcctgtgtacagcaacggcatccatgccgcacagacactggaacgg
aaggaggattga
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