Crotalus tigris (Tiger rattlesnake): 120311897
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Entry
120311897 CDS
T08476
Symbol
PCDH7
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
120311897 (PCDH7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctig01009
]
120311897 (PCDH7)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ctig04515
]
120311897 (PCDH7)
Protein phosphatases and associated proteins [BR:
ctig01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120311897 (PCDH7)
Cell adhesion molecules [BR:
ctig04515
]
Cadherins
Protocadherins
120311897 (PCDH7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Mid2
DUF6479
TMEM154
Syndecan
Motif
Other DBs
NCBI-GeneID:
120311897
NCBI-ProteinID:
XP_039207886
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MPALLGLVQSRSYYSYYYCCYCCWILLLLPPPFWLSLAAAKQVLRYRLAEEGPADIRIGN
VASDLGIVTGSGEVTFSLESGSEYLKIDNMTGQLSTTERRIDREKLPQCQMIFDENECFL
DFEVSVIGPSQSWVDLFEGRVVILDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDR
DFGRNGIDRYELLQEPGGEAGRRGAGATVAAAAASAAASDGALYPGGKRRQEPDGPARSS
VFELQVADTPDGEKQPQLIVKGALDREQRDSYELSLRVRDGGEPARSSQAILRVLITDVN
DNSPRFEKSVYEADLAENSSPGTPILQLRAADSDAGVNGQIEYVFGAATESVRRLLRLDE
SSGWLSVLHRIDREEVSQLRFTVLARDRGQPPKNDKATVALTIRDENDNVPTIDIRKIGR
IPLRDGVASVAEDVLVDTPIALVQVSDRDEGENGVVTCTVVGDVPFQLKPASEGEGEAQN
KRKYFLHTSAPLDYEALRDYNVVIVAVDSGSPSLSSNNSLLVRVADTNDNPPVFSQPVLE
VPFPENNAPGERVATVLATDADSGKNAELAYSLEPSPLAAETPLGLFTIDPDSGDLRVQA
VLDREQRDTYEFQVTARDKGVPSLQGSALVVVRVADRNDNEPRFMQDVFTFYVKENLQPN
SPVGMVTVMDADQGRNAQLSLAIQPGGAQEAGQGTPSDPSIFSIENDTGTIYSTVSFDRE
LQTSYTFRVKAVDGGEPALSATATVSLFVMDENDNAPAVTSPANSSYTVLPPSSSPRSVV
AAVQARDADAGQNAELSYSLVGGNPFKLFEIDPASGVVSLVAKLAPKHYGLHRLVVQVND
SGQPPQATTALLHVFVNESLANASAVESQVARSLHTPLGRDIAGDPSYELSKQRLSIVVG
VVAGVMAVLLLILVVVLARYCRSKGKHGGYEAGKKDQADFFTPQPHDKAKKPKKDRKGKK
GGGGKQPLYSSIVTVEASKPNGQRYDSVHEKLSAAGSPALSRYRSVNGGPGSPDLARHYK
SSSPLPTVQLHPQSPTAGKKHQAVQDLPPANTFVGAGDNISIGSDHCSEYSCQASSKYSK
QVGTLQTSQSPGHIEESCKMNVCARK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgccggcgcttctgggtttggtgcaatcgcgctcctactactcctactactactgctgc
tactgctgctggattctgctgcttttgcctccgccgttttggctcagcctggcggcggct
aaacaagtgctgagataccgcttggcggaggaagggccggccgatattcggatcgggaac
gtggcttcggacctgggcatcgtcaccggctcgggcgaggtgacgttcagcttggaatcg
ggctcggagtatttgaaaatcgacaacatgacgggccagctgagcaccacggagcggcgc
atcgaccgcgagaagctgccgcagtgtcaaatgatcttcgacgagaacgagtgctttctg
gacttcgaggtgtcggtcatcgggccctcgcagagctgggtcgacctcttcgaaggccgg
gtcgtcatcctggacatcaacgacaacacgccgacgttcccatccccggtgctgaccctc
accgtcgaggagaaccgcccggtggggaccctctacctgctccccaccgccaccgaccgc
gacttcgggcgcaacggcatcgaccgctacgaactgctgcaggagcccgggggggaggcc
ggcaggcgcggcgcgggggccacggtggcagctgcagccgcctccgccgctgcttccgac
ggggccctgtatcccggtggcaagaggaggcaggagcccgacggcccggctcggagcagc
gtcttcgagctgcaggtggccgacacccccgacggggagaagcagccccagctgatcgtc
aaaggggctctggatcgcgagcagagggactcctacgagctgagcctgcgggtgcgggac
ggcggggagccggcgcgctcctcgcaggccatcctccgcgtcctgatcaccgacgtgaac
gacaacagcccccgcttcgagaagagcgtctacgaggcggatctggccgagaacagcagc
ccgggcacgccgatcctgcagctgcgggccgccgactccgacgccggggtgaacgggcag
atcgagtacgtcttcggggcggccaccgagtcggtcaggcgcctgctccgcctggacgag
tcgtcgggctggctcagcgtcctgcaccgcatcgaccgcgaggaggtgagccagctgcgc
ttcaccgtcctggcccgcgaccgcggccagccgcccaagaacgacaaggccacggtggcg
ctgaccatccgcgacgagaacgacaacgtgcccaccatcgacatccgtaagatcgggcgc
atcccgctccgcgacggggtggccagcgtggccgaagacgtgctggtggacacccccatc
gccctggtgcaggtctcggaccgcgacgaaggggagaacggcgtggtgacctgcaccgtg
gtgggcgacgtgcccttccagctcaagccggccagcgagggggagggcgaggcgcagaac
aagcgcaagtacttcctccacacctcggccccgttggactacgaggccttgcgggattac
aacgtggtcatcgtggccgtcgactccggcagccccagcctgtccagcaacaactcgctg
ctggtccgggtggccgacaccaacgacaacccgcccgtcttcagccagcccgtcctggag
gtgccctttccggagaacaacgccccgggcgagcgggtggccaccgtgctggctaccgac
gcggacagcggcaagaacgccgagctggcttactctctggagccctcgcctttggcggcc
gagacgcccttggggctattcaccatcgacccggattcgggcgacttgcgggtccaggcg
gtgctggatcgcgagcagcgggacacttacgagttccaagtcacggcccgggacaagggg
gtgccttctttgcagggctcggccctggtggtggtgcgggtggccgaccgcaacgacaac
gagccccgcttcatgcaggacgtcttcaccttctacgtcaaggagaacctgcaacccaac
agcccggtgggcatggtgacggtgatggatgccgaccaagggcgcaacgctcagctcagc
ttggccatccagcccgggggcgcgcaagaagcgggccagggcaccccctcggacccgagc
atcttctccatcgagaacgacacgggcaccatctactccaccgtctccttcgaccgggag
ttgcaaaccagctacaccttccgcgtcaaggcggtggacggaggcgagccggctctctcg
gccacggccaccgtctcgctcttcgtcatggacgagaacgacaacgcgccggccgtcacc
tcgcccgccaacagctcctacaccgtcctgcctccttccagcagcccgcgctccgtggtg
gcggccgtgcaagcccgagacgccgacgcgggccagaacgccgagctcagctacagtttg
gtgggcggcaaccccttcaaactcttcgagatcgacccggccagcggggtggtctcgctg
gtggccaagctggcccccaagcactacggcttgcaccgcctggtggtgcaggtcaacgac
agcggccagccgcctcaagccaccacggctctgctccacgtcttcgtcaacgagagcttg
gccaacgccagcgcggtggagagccaagtggcccgcagcttgcacacgcccctgggccgg
gacatcgcgggcgaccccagctacgagctgagcaagcagcggctgagcatcgtggtgggc
gtggtggccggcgtgatggccgtgctgctgctgatcctggtggtggtcctggctcgctac
tgccgctccaagggcaagcacggcggctacgaggcgggcaagaaggaccaggcggacttc
ttcaccccgcagccccacgacaaagccaagaagcccaagaaggaccgcaagggcaagaaa
gggggagggggcaagcagcccctctacagcagcatcgtcaccgtcgaggcttccaagccc
aacgggcagcgctacgacagcgtgcacgagaaactgtcggccgccggcagcccggcttta
agccgctaccgctccgtcaacggagggcccggcagtccggatttggcccggcattataaa
tccagctcgcctttgcccaccgtccagcttcacccccagtcgcccaccgccgggaaaaag
caccaggcggtgcaggacctgccgccggccaacaccttcgtgggggcgggggacaacatc
tccatcgggtcggaccactgctccgagtacagctgtcaggccagtagcaagtacagcaag
caggtgggaacactgcagacctcacaatcccccggccacattgaggaatcgtgtaaaatg
aatgtatgcgctcgtaagtga
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