Crotalus tigris (Tiger rattlesnake): 120311901
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Entry
120311901 CDS
T08476
Symbol
HMBOX1
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ctig03000
]
120311901 (HMBOX1)
Transcription factors [BR:
ctig03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120311901 (HMBOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
CUT
HTH_24
DUF494
HTH_26
HTH_37
HTH_31
HTH_23
Motif
Other DBs
NCBI-GeneID:
120311901
NCBI-ProteinID:
XP_039207893
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MLRTFPVVLLETMFHYTDEPRFTIEQIDLLQRLRRTGMTRHEILHALETFDRLDQEHSDK
FGRRSAYGSGSCSNSTNNVPASSSTATASTQTQHSGMSPSPSNSYDTSPQPCTTNQNGRE
SNERLSAFNGKMSPTRYPLANSMAQRSYSFEASEEDLDVDDKVEELMRRDSSVIKEEIKA
FLANRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKSNPGATLSMR
PAPIPVEEPEWRQTPPPVTATSGTFRLRRGSRFTWRKECLAVMESYFNENQYPDEAKREE
IANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEAAILESHGIDVQSPG
GHSNSDDVDGNDYSEQETWQVRNGEEEGRCTEGGREAEKLEEDRRICSKQDDSTSHSDHQ
DPISLAVEMAAVNHTILALARQGTSEIKTEALDDD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgctgagaacctttccagtggttctgctggaaaccatgtttcactacactgatgaaccc
agatttaccatagagcaaatagatctacttcaacgcctgcggcgtactggtatgacacgg
cacgaaatcctccatgctttggaaacctttgaccgtcttgaccaggaacacagtgacaag
tttgggcggcgctctgcctatgggagtggatcctgtagtaacagcaccaacaatgttcca
gcgtcttcctctacagccacagcttccacacagacccagcattctgggatgtccccatct
cctagcaacagttatgatacctccccacaaccttgcactaccaatcaaaatgggagggag
agtaacgagaggctgtctgccttcaatgggaagatgtcacctacacgttaccctctggca
aatagcatggctcaaaggtcatatagctttgaagcctctgaggaggacttggatgtagat
gataaagtagaagaattgatgaggagggacagcagcgtgataaaagaggaaatcaaagcc
ttcctggccaaccggaggatttcgcaagcagttgttgcacaggttacaggcatcagtcag
agtcggatctcccactggctgttgcaacagggatcagacctgagtgagcaaaagaaaagg
gccttttaccgatggtatcagcttgagaaatcaaatccaggggctacattaagcatgaga
ccagcccctattccagttgaagagccagaatggagacagactcctccgccagtcacagct
acctctgggactttccgcttgcgacgcggcagtcggtttacctggagaaaggaatgtttg
gctgtcatggaaagctacttcaatgagaatcaatatcctgatgaggccaagagagaagaa
attgcaaatgcctgtaatgcagttattcagaagccaggaaagaagctgtcagatctggag
cgagttacttccctcaaagtgtacaattggtttgccaatagaaggaaggaaatcaaaagg
cgagccaatattgaagcagcaatcctggagagtcatgggatagatgtacaaagtcccgga
ggccattccaacagtgacgacgtagacggaaatgactattcagagcaggagacttggcaa
gtacgcaatggggaggaggagggaagatgtacagagggaggcagagaagcagagaagtta
gaagaagacaggaggatctgctcaaaacaagatgacagcactagccatagcgaccaccaa
gaccctatctcactagccgtggagatggcagcggtaaatcacaccattctggcgttggcc
cggcaaggaaccagcgagatcaaaacagaggccctggatgatgactga
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