Crotalus tigris (Tiger rattlesnake): 120312113
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Entry
120312113 CDS
T08476
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120312113 (CHD9)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120312113 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Chromo_MIT1
Motif
Other DBs
NCBI-GeneID:
120312113
NCBI-ProteinID:
XP_039208341
LinkDB
All DBs
Position
Unknown
AA seq
2887 aa
AA seq
DB search
MTDPMMDFFDDANLFSDTLEGLSDDAFVQTGPVSLVDELNLGAEFEPLQIDSLNHVQETH
TRQKMNDYEHLNQYDSLKLQVSQSFSSPVENVLSPHSEFSCSPVHPQNQTNGLFPDVADG
SPMWGHQTSSSVSNQNGSPFHQGPAQSMQQNKSFVAHHSFALFQASEHHHPCASLQLQQS
INAGENTRNQPDGFLEVNASVSHRTNVPHPSQAVDVSKSQQSISMPSFSQTRNNSPHFCG
NQEGNYDGPSPTITSCSINTQFSPPFSYNSNQISPSSLLQSSATLSVSQQAHPLPDFSGS
DAFATRRGTKPEDSDSLLNSSTSLTSNNFHVVHSAQPQGNFSSSKLSAVNINFSTPPGSG
PQLSHFSDPIEGNGFSSLDENLLHQVESQSESFTELDPEALLQDDLLPQFDETAFVQDTP
SNDLEHQLEQRIVPQANLLQAQSQNCNHSWYPPGSNLHQAEQKNVTAQAQPPSAKKADGS
GVYTKLQNTQVKSMLEKKQKKKVESESKQEKANRIISEAIAKAKERGERNIPRVMSPENF
PSASAEGKEEKKGRKAKSKPKDRESKKPKTGSSKTKERAKIGKLIITLGKKQKRKNDSSD
ELSDAKQTSQQPFKDEGSQKRRSNRQVKRKKYAEEGEGKQSEEETKVSVKIKKNSAPLPA
EQPLQLFVENPSEEDAAIVDKILSSRIVKKEIPGTGSVEAEEFFVKYKNYSYLHCEWATE
QQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEESFNPDYTEVDRVLEVSFCEDKDTGEHV
TYYLVKWCSLPYEDSTWELKEDVDQGKIEEFEQLQALRLDSRQLDRPPPNSWKKIEQSRE
YKNGNQLREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLCEILLNGIKGPFLI
IAPLSTIANWEREFRTWTDLNVVVYHGSMISRQMIQRYEMYFRDSQGRIIRDTYKFQAII
TTFEMILGGCPELNAIEWRCVIIDEAHRLKNRNCKLLEGLKLMNLEHKVLLTGTPLQNTV
EELFSLLHFLEPLRFPAESTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPK
QETIIEVELTNIQKKYYRAILEKNFAFLSKGAGQANVPNLVNTMMELRKCCNHPYLIKGA
EEKILGEFRETYSLTAPDFHLQAMIQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDI
LEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTC
IIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQS
MSGRENSVGGIQQLSKKEIEDLLRRGAYGAIMDEEDEGSKFCEEDIDQILQRRTKTITIE
SEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDAISGRNSLVIDTPRIRKQ
TRPFNATKDELAELSDIESEGEDKPKLRRPCDRSSGYGRTECFRVEKNLLVYGWGRWREI
LSHGRFKRQLNEQDVEIICRALLAYCLVHYRGDEKIKSFIWDLITPTENGQARELQNHLG
LSAPVPRGRKGKKVKTQTSTFDIHKAEWLRKYNPEHLLQDDGYKKHIKHHCNKVLLRVRM
LYYLKQEVIGNEFQKVFEGVDASEIDIWIPEPDHSEVPAEWWDTEADKSLLIGVFKHGYE
KYNTIRADAALCFLERVGKPDDKAVAAEQRANDYMDGDVEDPEYKPAPALFKDDMEDDAS
SPGDLIIGDGEGQLIEGDKLYWPTQSALTTRLRRLITAYQRTSKNRQSQPIQAPFSVQAC
VMPSAFEEAVLNPKVAAKIERQQRWTRREEADFYRVVSTFGVVFDPDRAQFDWTKFRAMA
RLHKKTDESLEKYLYAFMAMCRRVCRLPSKDEFVDSNLFIQPITEERASRTLYRIELLRK
VREQAVRHPQLCERLKHCQPNPDLPVWWECGTHDWDLLVGAAKHGVSRTDYHILRDPELS
FMSAQRNYSHSKVALSRTPTPLLQQYQAALSASPLVPPARLPDVKGNVLEDPKLNDENHK
EPHSSDEESVSPENLQMGVKAEPTSPKSGSPSLSADPKPVPKAESDRRMVAARTEPLTLN
AASKKPRSGKRGSDSSSDSDSDSDRSSCSSRPSSSSSSSSSSCSRSRSGSSSSSSSSCSS
ASSSSSSSSSSSSSSSSSSEESDSDEEEAQKRREGTAHLKAYDEESVASISTVQDETQDS
FQMNNGTPNSNCILQGGYMLAASYWPKDRVMINRLDTICQTVLKGKWPLARRNYESNPVA
SFYTTKLLDSPGAASAAADYSEPCIPTPPSADLKEENDQSPQMSKVKKHVQEKEFTVKIN
DEGGLKLIFQKQGLSQKRPFESEDGLLGQQQYLARLHELQSASETSLANFPKSLPESGTS
NQSIACANGVIATDQPAVKKRRGRRKNVEGVDILFLNRSKTPNHVCHSVGTPQVGLGLMP
PLLFPPSQGLCDAESPVPVINLKDGTRLAGDDAPKRKDLEKWLNEHPDYVEDLGAFIPKM
QLHEGRPKQKRHRCRNPNKLDINSLTGEERVQLINRRNARKVGGAFAPPLKDLCRFLKEN
SEYGVAPEWADVVKQSGFLPESMFDRILTGPVVREEVSRRGRRPKSEIAKAAAAATPAAN
VPVAPLLTNGLLPGVDLSTLQALQQNLQNFQSLQVTTGLMGISAGLNTAGDAKNMAAVFP
MLLSGMAGLPNLLGMRGLLSKSTEPASEEKKGQDPRELDGKRERTESPHAHNGGENSVSG
SPSTSSAASTTASSLALNPLLLSNILYPGMLLTPGLNLHIPALSQSNIFDVQNSENHGTG
FTKPLGGKGESSRVADEEGSKGGTEPSSRNGNSTDEASEKAEASSGCDSISSSSSSSEEE
SDSSDED
NT seq
8664 nt
NT seq
+upstream
nt +downstream
nt
atgacagaccctatgatggatttttttgatgatgccaatctttttagtgataccttggaa
ggcttgtcagatgatgcctttgtacaaactgggcctgtttctctggtggatgagttgaac
ttgggtgcagagtttgagcctttgcagattgattccttgaaccacgtgcaggagacacac
actcggcaaaagatgaacgattacgaacatcttaaccagtatgattctctgaaacttcaa
gtaagtcagtccttcagtagtccggttgaaaacgttttatccccacattctgagttcagt
tgctctcctgtccatccacaaaatcaaactaatggattatttcctgatgtagccgatggg
agtccgatgtgggggcaccaaacttcgagcagtgtttctaatcagaatggatctccgttc
catcaaggacctgcgcagtctatgcagcaaaataaaagctttgtagcacaccacagtttt
gccttatttcaggccagtgagcatcatcatccatgtgcctcattgcagttgcagcaaagc
attaatgcaggagagaacactcggaatcagcctgatggtttcttggaggtgaatgcgtct
gtttcacatagaactaatgttccccatccatcccaagctgttgatgtatcaaaatcacaa
cagtctatctctatgccatccttttctcagactaggaataactcgccccacttttgtgga
aatcaagaaggaaactatgacggaccatctcctacgataacgtcatgctctattaacacg
cagttttctcctcctttttcctataatagcaaccagatctctccttccagtcttcttcaa
tcttctgcaactctttctgttagccagcaagctcatcctctccctgacttttcgggaagt
gatgccttcgcaactcgaagagggaccaaaccagaagattcagacagcctccttaattca
agtacatcactgacttcaaataatttccacgtggtgcattcagcacaacctcagggcaac
ttcagcagttcaaaactatcagcggtgaacattaatttttctacccctcctggctcgggt
cctcagttaagccacttcagtgatcctatagagggcaatggtttttcgtctttggatgag
aatttgctccatcaggtggagtctcaaagtgaatcatttacagaactcgacccagaagcc
cttctgcaggacgatctccttccccagtttgatgaaactgcatttgttcaggacacccca
agtaatgatttagaacatcagctggaacagcgcattgtcccacaagcaaaccttcttcag
gctcagtctcagaattgcaaccattcttggtatcctcctggttctaatctacatcaggca
gagcagaagaacgtcactgctcaggcccagcccccctctgccaagaaagcagacggttcc
ggggtatacactaagttgcaaaatacccaggtgaaatcaatgcttgaaaagaaacagaag
aaaaaagtggagtccgaaagtaagcaagaaaaagccaatcgcatcatatccgaggcaata
gccaaagcaaaagagagaggggagagaaacatcccacgagtcatgagtccggaaaatttc
ccaagtgcttcagcagaggggaaagaagaaaaaaaggggagaaaagctaaatccaaacca
aaagacagagaaagcaaaaagcccaaaactggttcttctaaaactaaagaaagggcaaaa
atcggcaagcttattattaccctgggtaaaaaacagaagagaaaaaatgactcctcggac
gaattgtctgatgcgaaacagacttctcagcaacccttcaaagacgaaggttcacagaag
agaagatcgaatcgacaagttaaaaggaagaaatatgccgaagaaggtgaaggaaagcaa
tctgaggaagaaaccaaagtttctgtaaaaattaaaaaaaattctgctcctttgcctgct
gagcaacctttacaattatttgtagagaatccaagtgaagaagatgcggcgattgtagat
aaaattttatcttccagaattgtaaaaaaagaaattccagggactgggtcagtggaagcc
gaagaattttttgttaaatacaaaaactactcctacctccactgtgaatgggccacagag
caacagcttttaaaggacaaaagaatccagcagaaaatcaaacggttcaagctgaggcaa
gcacagagagcccatttttttgcagatatggaggaagaatcttttaatcctgattatact
gaagtagaccgggttttagaagtctccttttgtgaagataaagacactggagagcatgtt
acctactatttagtaaagtggtgctccttgccatatgaagacagcacatgggaattgaaa
gaagatgtagaccaaggaaaaatagaagaatttgaacagctgcaagctttaaggcttgac
tcaagacaattggatcgccctcctcctaattcatggaagaaaatagaacagtccagggaa
tataaaaatggcaaccaactcagggaataccagctggaaggtgtcaactggcttcttttc
aattggtataatagacaaaactgcattttagcagatgaaatgggccttggcaaaaccatc
cagtcgatcacattcctctgtgaaatccttctgaatggtatcaaaggacccttcttgatc
attgcgccgctttcaaccatagccaactgggaaagggagttccgcacctggaccgatctt
aatgttgtggtctatcatggaagcatgattagtaggcagatgatacagcggtatgaaatg
tacttcagggattcacagggccgcatcattagggatacctacaagttccaggccataatc
accacttttgaaatgattcttgggggctgtccggagctcaacgcaattgagtggcgttgt
gttattattgatgaagcacaccgattgaagaatagaaactgcaaacttctggagggactc
aaactcatgaatcttgagcataaggtgctattgaccggcacaccgctgcaaaacactgta
gaagaattattcagcctacttcacttccttgaacctctgcgcttcccagccgaatctacg
ttcatgcaggaatttggagaccttaaaacagaggaacaggtacaaaagctgcaggctatt
ctgaaaccaatgatgctaagaagactcaaagaagatgtagagaagaaattggctcccaag
caagagactattattgaagtggagttaacaaatatccagaagaaatattatcgagctatt
ttagagaaaaactttgcatttttatccaaaggggcagggcaagctaatgtgcctaactta
gttaataccatgatggaactcaggaaatgctgcaatcacccatatcttatcaaaggggct
gaggaaaaaatcttaggagaatttagggaaacctatagtctgacagctcctgattttcac
ctgcaagcaatgatccaatctgctgggaaactagtcctcattgataaacttcttccaaaa
atgaaagcaggaggccacaaggtgcttatcttctctcagatggtccgctgtcttgatatc
ctggaagattacctaatacataaaaggtatctgtacgagcgaatcgatggacgagtaaga
ggaaacttacgtcaggctgccattgatcgatttagcaagccggattctgaccggtttgtt
ttccttctctgcaccagagcgggcggattaggcataaatttaacagcagctgatacttgt
atcattttcgattcagactggaatcctcagaatgatttgcaggctcaagcgcgttgccat
aggattggtcaaaacaaggcggtgaaagtctacaggctgataacaagaaactcctacgaa
agggagatgtttgacagagcaagcctaaagcttggtttagataaagctgttttgcagagc
atgagcggcagagaaaatagcgtcggcggtatccagcaactttctaaaaaggaaattgag
gacttgcttcgaagaggcgcgtacggcgccatcatggacgaagaggatgaaggctctaag
ttctgtgaagaagacattgatcaaatcttgcaacgccggacaaaaacgatcacaattgaa
tctgaaggaaggggctctacattcgctaaggctagttttgttgcatctggaaacagaaca
gatatttcattagatgatcctaacttctggcagaaatgggccaaaaaagctgaaatagac
atagatgccatcagtggtagaaatagcttggttattgacaccccaagaattaggaagcaa
acaagaccgtttaatgctacaaaagatgaacttgctgagttatctgacatcgaaagtgaa
ggagaggataaaccaaaacttagaagaccttgtgatcgctccagtggatatggaagaaca
gaatgcttcagggttgaaaaaaacctgttagtttacggatggggtcgttggagagaaatt
ttatctcacgggcgcttcaagagacagctaaacgaacaagatgtggagatcatttgccga
gccctcctagcatattgcctcgtccattatagaggagatgaaaagattaaaagttttatt
tgggatcttattacgccgactgagaatgggcaagctcgagaattacagaatcacttaggt
ttgtcagcccctgttcccaggggcagaaaaggaaagaaagttaagacccaaacaagcaca
tttgatattcataaagctgagtggcttcgcaagtacaatccagaacatttgttgcaagat
gatgggtataaaaagcacataaaacaccattgtaataaggttttacttcgagttagaatg
ctgtattacttgaagcaagaagtcattggtaatgaattccaaaaagtttttgaaggagtt
gatgccagtgaaattgatatttggatcccagaaccagaccactctgaagtgccagctgaa
tggtgggatacagaagcagataaatctctattgataggtgtttttaaacatggttatgaa
aaatataacacaattagagcagacgccgccctttgcttcttagaaagagtggggaaaccg
gatgataaggctgtggcagctgagcagagagcaaatgactatatggatggggatgtagaa
gacccagaatacaaaccagccccagccttgtttaaagacgatatggaggatgatgcctca
tcgcctggggatcttataataggagatggagagggtcaattgattgaaggagacaagctt
tactggccaactcagtctgccttaacaacacggttgcgtcgtctcataacagcatatcag
cgtaccagtaagaacaggcaaagccagccaattcaagcaccattttctgtccaggcatgt
gtgatgccatctgctttcgaagaagctgttttaaatccaaaagtggctgccaaaattgaa
agacaacaaagatggacaagaagagaagaagctgacttctacagagtggtgtctactttt
ggtgtagtatttgatccagacagagcccagtttgactggacaaaatttagagcaatggcg
aggctacataaaaaaacggatgaaagtttagagaaatatctgtacgcattcatggccatg
tgcagaagagtttgccgcctcccttcaaaagatgagtttgtggattcaaatcttttcatt
cagccaataacagaagaacgtgcatctcgaaccttataccgtattgagctcctgagaaag
gtacgagagcaagcggtccgccatcctcagctctgtgagcgattaaaacattgtcagcca
aatccagacttgcccgtttggtgggaatgtgggacccatgattgggatttattggttggt
gctgcgaaacacggcgttagcaggacagattaccacatcctccgcgatcctgaactttcc
tttatgtcagctcagaggaactacagccacagcaaagtcgcgctctcgaggactcctact
ccgctcttgcaacagtaccaggcggcgttgtctgcgtctcctctcgtgcctccagccagg
ctgcctgatgtgaaagggaatgtgcttgaggacccaaaacttaacgatgaaaaccacaaa
gaacctcattcttccgacgaagagtccgtgtctcctgaaaacctgcagatgggagtgaag
gcagaaccgacgagtccaaagagtggctcaccctccctctctgcagaccctaagcctgtc
ccgaaggctgagagcgacaggcgcatggttgcggcaaggaccgaacccttaacgctaaac
gctgcttccaaaaagccaagatctgggaagagaggatccgactctagttctgattcagac
tccgattcagatagatcgtcctgttcttccaggccatcgtcgtcttcatcgtcgtcttct
tcctcttgctctcgttccagatcaggatccagctcttcatcttcttcatcttgctcttcg
gcgtcatcgtcctcttcctcttcttcctcctcttcctcctcctcttcctcttcgtcggaa
gagagtgacagtgatgaagaggaggcacaaaagagacgggaagggaccgctcacctgaaa
gcgtacgatgaagaaagcgtagcttccataagcactgtgcaggacgaaacccaggacagt
ttccaaatgaataacggaacgcccaattctaattgtatcttacaaggtggatacatgtta
gctgcttcctactggcccaaggatcgggttatgattaaccgcctggatactatttgccaa
acagtcctgaaaggtaaatggcctttagcaaggagaaattatgagagcaatcctgtggct
tccttctacaccaccaagcttctggacagcccaggtgctgcttctgctgctgctgactac
agcgagccctgcatcccgactcccccaagcgcggaccttaaagaagaaaacgaccaatca
ccacagatgtcaaaggtgaagaagcatgtgcaggaaaaggagtttacagtgaaaatcaat
gacgaaggtggtttgaaattaattttccagaagcagggcctttctcagaaaaggccattt
gaaagcgaagatggcctgttaggacagcaacagtacctcgccaggttacatgaactccag
agtgcttcagagacaagccttgccaattttccaaagtctttgccagagtcaggaacctct
aaccagtcgatagcttgtgcaaatggggtaattgccactgatcagcctgcagtgaaaaag
aggagaggaagaagaaaaaatgtggaaggagttgatatcttatttttaaatagaagcaaa
acgcctaaccatgtttgtcatagtgttggtacccctcaggttggtctaggcctaatgccc
cctcttctgtttccaccatcacaaggcctgtgtgatgcagaaagccctgttccagttatt
aatttaaaagatggcacaaggcttgcgggtgacgatgcccctaagagaaaagatttggaa
aaatggcttaatgaacatcctgactatgtcgaagatttaggagcctttatccctaaaatg
cagcttcacgaaggaagaccgaaacaaaaaaggcaccgttgccgcaatcctaataagctg
gacatcaatagccttactggagaagaacgtgttcagttaataaaccgaagaaatgcgaga
aaggtaggtggtgcctttgctccacctctgaaagatctctgcagattcctgaaagaaaat
tctgaatacggtgtagctcctgaatgggcagatgttgttaagcagtcgggatttcttcca
gaaagcatgtttgaccgtattctcacagggcccgtcgttcgagaagaagtcagcagaaga
ggaagacggcccaagagcgaaattgccaaggcagcggctgcagctacgccagcagcaaac
gtcccagtcgcccctttgctgaccaacgggctgctcccaggggtggatctctcaaccctg
caggccttacagcaaaacctgcaaaattttcagtcgttacaggtgaccacgggtttaatg
gggatttctgctggtctgaacacagcgggtgacgcgaaaaacatggccgctgtctttccc
atgttgctttcaggaatggctggtttaccaaatttgctaggaatgcgaggactcctaagc
aagtctactgaaccggcttccgaggagaagaaaggacaggaccccagagagctggacgga
aagagagaaaggacagaaagcccacatgcacataatggcggagaaaactccgtatcgggt
tctccttcgacgtcctcggcggccagcaccacggccagctccttagctcttaacccttta
ctgttgtccaatatactttacccaggaatgcttctcacgccaggccttaatctccacatc
ccagctttgtcccagtcgaatatttttgatgtacagaacagtgaaaatcatggcacaggc
ttcaccaagcctctgggaggaaaaggagagagttccagggttgcagatgaagaaggcagc
aaggggggaacggagccgagctctcgcaacggaaacagcacagacgaagcttcggagaaa
gcagaagcttcttccggctgtgacagtatctcctcctcttcctcctcgtcggaggaggag
tcagactccagcgatgaagactga
DBGET
integrated database retrieval system
