Crotalus tigris (Tiger rattlesnake): 120312230
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Entry
120312230 CDS
T08476
Symbol
SMC5
Name
(RefSeq) structural maintenance of chromosomes protein 5 isoform X1
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120312230 (SMC5)
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
120312230 (SMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
AAA_29
TMF_TATA_bd
GCN5L1
GCD14
AAA_25
Motif
Other DBs
NCBI-GeneID:
120312230
NCBI-ProteinID:
XP_039208570
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MAASAKRKSEETEAGSSGGKNHLSKRTSKESQPRSDDRRSANTSFVEGAIVRISMENFLT
YDNCVVFPGPHLNMIVGANGTGKSSIVCAICLGLAGKPSFIGRADKVGHYVKRGCNKGTV
EIEVHKKPKNITITREISVANNQSTWFLNKAPCTLRMVEEQVSALNIQVGNLCQFLPQDK
VGEFAKLSRIELLEATEKSIGPPEMYKFHCDLKNFRQRERELENSCTEKNSNLEKMKQKN
ERYKQDVERYHERQHHLDSIAMLEKKRPWVIYEETRKLYEEAKRTQNRQKEELRILRQTQ
APMIHEIREAEQQCAELEDKIKEKIAAIKETSQKCKQQQDALEKKDKQIEDIKLALRMKR
EAEMDRQKRIQNTRKMIEDWTNELRNTENAENIQPLMNSLNANLRQLEEEKANIDGELND
LRRERENLLKERKGIADRIAQFENLMNMKEEKLRVRFRDTHDALMWLRQNRGQFKRSVCD
PVLLSINMRDNKNAKYVENHISANDMKAFVFEMKEDMEIFLKEMRDNRKLRVNAVCAPSE
SFAEKRPSKPIEELYRYGFFSYLRELFDAPLPVMNYLCHQYHVYEVPVGTEKTRNMIERV
IKETKLKQIYTAEERYTVKISRYTNQSVSTNTSLRPAQYLTVTVDADKRRELEDKKNENN
RQLQSLDSQMALLSEKQKCLECKDNQLRQQKKELLERKNKRKQLESKISMKCDSLRQMEQ
DGINLEEESEQANATIKKLNTQKVKLVIDFMRLIKSCMALNEDKTNLVLENTIATFHKSR
LDAEYRTATVQLRAMDQQISDLDVKKNSLLMKCKGLLSTAKKVCNLGMDQNLPEDVYKAF
LDLPNTVDEIDALLNEEKTRASCFTGLSASVVEEYNKRVKEIAQMTIELEEKKKELDSYR
RNISQVKERWLNPLKQMIEQINEKFSSFFSSMQCAGEIDLHTENEEEYDKYGIRIRVKFR
SSTQLHELTPYHQSGGEKSVSTILYLMALQELNRCPFRVVDEINQGMDPVNERRVFDVVV
ENACKKSTSQYFFITPKLLQNLSYGEKMTILLVYNGSSMLESNKWDLKAFFRRRRRFQP
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctctgctaagcgtaaatctgaagaaactgaggcggggagcagcgggggcaag
aatcacctcagtaaacgaacctcgaaggaaagccagccgcgatcggacgatcgacgaagc
gcaaatacatcgttcgtcgagggcgctatcgtgagaatctccatggaaaacttcctaacc
tacgataactgtgtggtgtttccaggccctcatctaaatatgattgtgggagctaatggg
acaggtaaatcaagcattgtatgtgcgatatgccttggattggcaggaaaaccttccttt
ataggacgagctgacaaggttggtcattatgtgaagcgaggttgcaataaaggaacagtt
gaaattgaggtgcataagaagcccaagaatattactatcacacgagaaatttctgtagca
aacaaccagtcaacttggtttcttaataaagccccctgcactctcagaatggtggaggaa
caagtctcagctttaaatattcaagtgggcaatctgtgccagtttcttccgcaggataaa
gttggagaatttgcaaaattgtccagaattgagttgcttgaagctacagaaaaatcaatt
ggtccaccagagatgtacaaatttcactgtgatctgaaaaacttcaggcagagagagcga
gaacttgaaaattcatgcacggaaaaaaatagcaatctagaaaaaatgaagcaaaagaat
gaaagatataagcaagatgtggagcgatatcacgaacgtcagcaccatctagattcaatt
gcaatgcttgagaaaaaaaggccatgggtgatatatgaagaaacacggaagctgtatgaa
gaggctaaaagaacccaaaatagacagaaagaagaattaagaatattgagacagacccag
gctcctatgattcatgagatcagagaagctgagcaacaatgtgcagaactggaagacaaa
atcaaggaaaagattgcagctatcaaagaaacatctcagaaatgtaaacagcaacaggat
gctttggagaaaaaagacaaacaaattgaagatattaaactagctttaaggatgaaaaga
gaggcagaaatggatcggcagaagagaatacaaaacactcgtaagatgatagaagattgg
accaatgagcttagaaacacagagaatgctgagaacattcagcctttaatgaattctctt
aatgccaaccttagacagttggaagaagagaaggcaaatattgatggtgaattaaatgat
ctgcgcagagaaagggagaacttgctaaaagaaagaaaaggtatagcagaccgcattgct
caatttgaaaatctgatgaatatgaaggaagagaagctgagagtgagattccgagataca
catgatgctcttatgtggctaagacagaatagagggcaatttaaaagaagcgtctgtgac
cctgtgttactttcaattaatatgagagataataagaacgctaaatatgtagaaaatcac
atttctgctaatgacatgaaggcctttgtctttgaaatgaaggaagatatggaaatattt
ttaaaagagatgcgggataatcgcaaactaagagtgaatgctgtatgtgcacctagtgaa
tcatttgctgaaaaaagaccttcaaaaccaattgaagaactgtaccgatatggatttttc
tcttacttaagagagttattcgatgctcccctccctgtgatgaattacctgtgtcatcag
tatcatgtttatgaggttcctgtaggaacagagaagactaggaatatgattgaaagggta
ataaaggaaacaaaacttaaacaaatctacacagcagaagaaaggtacacagtaaaaata
tcgcgttacacaaatcagtctgtttccactaacacatcattgagaccagcacagtatctt
actgttacagtggatgcagataaaagaagagagttagaagataaaaaaaatgaaaataac
aggcagttgcaatcattggattctcaaatggcattactctctgagaagcagaaatgccta
gaatgcaaagacaaccaactccgtcaacagaaaaaggaactcttggaacgaaaaaataaa
aggaaacaattagaatcaaaaattagtatgaaatgtgatagtttaagacagatggaacag
gatggcataaatctggaagaagaatctgagcaagcaaatgctacaattaagaaacttaac
actcagaaagtaaaacttgtaattgattttatgcgactaataaagagttgtatggccctt
aatgaagacaaaacaaatttggtgctagagaacacaatagctacttttcacaaaagtagg
cttgatgctgaatatagaactgcaactgtacaactacgagctatggatcaacaaatttct
gacctggatgtaaagaagaattctcttttgatgaagtgtaaaggtttactgagcactgct
aaaaaagtttgtaaccttggtatggatcaaaaccttccagaagatgtctataaggcattt
ctggaccttccaaatacagtagatgaaattgatgctctgctgaatgaggagaaaacaaga
gcttcatgtttcacaggcctcagtgcttcagttgttgaagagtataataaaagagttaaa
gaaatagcacagatgacaatagaactggaggaaaagaaaaaggagctggacagctatagg
cgaaatatttcacaggttaaggaaaggtggctgaaccctttgaaacagatgattgaacaa
ataaatgaaaagttcagcagcttttttagctctatgcaatgtgcaggggagatagatctt
catacagaaaatgaggaagaatatgacaagtacgggattcggattagggtcaaattccgt
agcagcacgcaacttcatgaattgactccataccatcagagtggaggagagaaaagcgtt
tccacaatattgtatttaatggctttgcaagaactcaacagatgccctttcagagttgtt
gatgaaataaatcagggaatggatccagttaatgaaaggagagtctttgatgtggtagta
gaaaatgcctgcaaaaagagcacttcacaatacttctttattacaccaaagctgttgcag
aatctcagttacggagaaaaaatgaccatattattggtctacaatggatcatctatgcta
gaatcaaacaagtgggacttaaaagctttctttagaaggaggcggagatttcaaccatga
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integrated database retrieval system
