Crotalus tigris (Tiger rattlesnake): 120312244
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Entry
120312244 CDS
T08476
Symbol
VTI1A
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120312244 (VTI1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ctig04131
]
120312244 (VTI1A)
Membrane trafficking [BR:
ctig04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
120312244 (VTI1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
LMBR1
Sec20
Laminin_II
DUF1664
ZnuA
Fusion_gly
DUF6987
Spc7
GP41
Orf78
CAP59_mtransfer
MMPL
DUF5344
SKA2
ODV-E18
Motif
Other DBs
NCBI-GeneID:
120312244
NCBI-ProteinID:
XP_039208597
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MSSDFEGYEQDFSVLTAEITNRIGKVPKLVGDEKRQLVSNVEKQLEEARELLEQMELEVR
EIPPQSRAMYSSRMKSYKQEMEKLDTDFKRSRIAYSDEVRNELLGDDGNSSEIQLIKLRE
ERAHLLDNTERLERSSRRLEAGYQIAVETEQIGQDILENLSQDREKIQRSRDRLRETDAN
LGKSSRILTGMLRRIIQNRILLVILAVIIIFAVLMVIFFSIRGH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgatttcgagggctacgagcaagacttttcggttcttaccgctgagatcacg
aaccgcatcggaaaagtccccaagttggtaggagatgagaagagacagttggtttcaaat
gtggaaaagcagctggaagaagcaagggagttgttggaacaaatggaacttgaagtgcgt
gaaatccctccacagagccgagccatgtacagcagtagaatgaagagctacaagcaagaa
atggaaaaacttgacacagattttaaaaggtcacggattgcctacagtgacgaggtgcgg
aatgagctcctaggggacgatgggaattcctcagagatccagttgataaaattacgtgaa
gagagggcacatctgctcgataacacagagaggctggaaaggtcatctcggagactagag
gctggataccaaatagcagtggaaactgaacaaattggtcaggacatattagaaaatctc
agtcaggatagagaaaagatccagcgttctcgagacagacttagagaaactgatgcaaac
ttgggaaagagttcaagaatccttacaggaatgttacgaagaatcatccagaaccggatt
ttgcttgttatcttggctgtcatcatcatttttgcagtcctgatggttatttttttttct
atcaggggacattga
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