Crotalus tigris (Tiger rattlesnake): 120312258
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Entry
120312258 CDS
T08476
Symbol
TDRD1
Name
(RefSeq) tudor domain-containing protein 1 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120312258 (TDRD1)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Gene silencing
piRNA pathway
120312258 (TDRD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
zf-MYND
SMN_Tudor
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
120312258
NCBI-ProteinID:
XP_039208656
LinkDB
All DBs
Position
Unknown
AA seq
1142 aa
AA seq
DB search
MEQRLQIRDLKSPNQSLRSPSTSPNFKSIVLDDKVPSLLNNFSICEQAKLFVANWNGSVE
SNHDGYDHKTVSLNVAGVGMKGKAPPANSLEFVNQLSPSQSPESKLNDPEGTFKVINNLL
SSTKKINPVSDSTLIQAMHLSSSDKILPISYKSSPLSPLYQPTCHFCGLFGSLRCTKCKQ
VCYCSASCQMKDWQIHNIVCKPSKSNTNKAEYCRKSLDESNKKENILPTNTKNVDEQGKK
IMVSDLSYLRLQKNMKIKGTITDFNSPSEFYIQVNSPEVQSNIRKLTMKLKDYKGINQVY
IPVKGEVAVAKYSLDQTWCRILIKEIDILTKSAQVLYIDYGKEENILLHKVKGLNEDLSQ
IPPCAIKCCIANVLDTKEWNENYKNIIAPILIGKYCSLIITDVLMDDMPCFIVDAILSDD
DKHLHEIILENMHDWNAKEKDSKKETSAMDPIVEKKSVLEKKMEWKELDDTDCLIPKIVS
VATGDAFLGMVAHIQNPGNFFCQQTENGSSLSQLQVSLREYCANTSITPDFCPAVGDMCC
AQFTEDNQWYRATVISFVSEKIALVGYIDYGNFEILQLNRLRPIVQKLMELPMQAINCTL
AGVKPISGTWLAEATSAMKQLIQNKVVAIKVTDKKMNTFVVEITDESVTPSVNVSKCLLE
LGYAIEEAPILLKQIETIKETNSEKQEPINWSWVTLTAKQVVNVMVSVLYNPSKFYCQLL
NKDDLNALKELNLSLAEYCEKTKPNVSQVTKGMVYGAYFSGDGRWYRAFVKDVISLEVIK
VQFVDYGNCEEITLDKIRHISSTFFKLPFQGIKCWLSGVRPKNNTWTTEAITTFQMYATE
KKLHARVISVMKNGAEVELIDNSNSIPMISEILIRKHLAFKEDSLLNPNTLPVTSTSMQW
TMPAFSIGDTLSALVLDVVDPGLFYVVPKEMKVDSQKLHKLMIELADYCCAQNDCTFQPK
IGEPCCARFSGDDKWYRAIILGIHESEIKIVYADYGIVEMLPFSRLQPITAPYLQLPFQI
LKCSLADIMGLDGKWSISAIEKLKSLLMNANVMITVKEVSQNIYPVIVQKKSENRVMDIA
EQLIIENLAKYSNNGNQCSKTTDCSCIELKKQVAKLEQVLYFLLKDRFGEDNIPNIMKAF
EK
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atggaacaaaggctacagataagggatctcaaaagtccaaatcagtctttgagaagtccc
agcacaagccccaacttcaaaagtattgtacttgatgataaagtaccatcattactcaac
aatttttcaatttgtgagcaggcaaaattatttgttgcaaattggaacggttcagttgaa
agcaaccatgatggctatgatcacaaaactgtttcattaaatgtggctggagtgggaatg
aaaggtaaagctcctccagcaaattctctggagtttgtcaaccaactctcaccttcccaa
tctccagaatcaaagctcaatgatccagaagggactttcaaagttataaataatttgcta
tcttctacaaagaaaataaatccagtatctgactcaacattgatacaagcaatgcattta
tcaagttctgacaaaattttacctatcagctataaatccagtccgttaagtcctttatat
cagcccacttgccatttttgtgggctgtttggatctttaagatgcaccaagtgtaagcag
gtctgttactgttctgcaagttgtcagatgaaagattggcaaatacataatattgtctgt
aagccaagtaaatcgaatacaaataaagctgaatattgtagaaaatcattggatgaaagc
aataaaaaggaaaatatattaccaacgaatactaaaaatgtagacgaacaagggaagaaa
ataatggtgtctgatctgagttatttaagacttcagaaaaatatgaaaatcaaaggtaca
ataacagattttaatagtcctagtgaattctacatacaagtgaattctcctgaagttcaa
agtaatattagaaaactaacaatgaaactgaaagattacaagggaattaatcaagtatat
attcctgtcaaaggagaagttgctgttgcaaaatattctctggatcagacttggtgcagg
atactcataaaagagatagatatcctcacaaagagtgctcaagtactgtatattgactat
ggaaaagaagaaaatatactactacacaaagttaaaggattgaatgaagatctttcacag
atcccaccctgcgccattaagtgttgcattgctaatgttcttgatacaaaagaatggaat
gaaaactacaagaatattattgctccaattcttataggaaaatattgttcattaattatc
actgatgttttgatggatgatatgccttgttttattgtagatgctatcttgtcagatgat
gataaacatttgcatgaaattatcttggaaaatatgcatgattggaatgcaaaggagaag
gatagtaagaaggaaacttcagctatggatcctattgtggaaaaaaaatctgttctagaa
aagaaaatggaatggaaagaattggatgatactgattgcttaattccaaagattgtctca
gtagctacaggagatgcatttttgggcatggttgcccacatacaaaacccaggaaatttt
ttttgtcaacagacagaaaatggcagcagcctttctcaacttcaagtatccctacgtgaa
tattgtgcaaatacctcaatcaccccagacttttgcccagcagtaggagatatgtgttgt
gcccagtttacagaagataaccagtggtatcgtgcaacagtgatatcctttgtttcagag
aaaattgctttagtgggatacatagattatggaaactttgaaattcttcagttaaataga
cttcgaccaattgttcagaaattaatggaattaccaatgcaagctataaattgtaccctt
gcaggtgtgaaaccaatatctgggacctggctggcagaagcaacttctgccatgaagcaa
ctgatccagaataaagtggttgccataaaagtcactgacaagaaaatgaatacttttgta
gtagaaattacagatgaatctgtgactccatcagttaatgtatctaaatgtcttttagag
ttaggttatgcaatagaagaagcacctattcttttgaaacagattgaaacaattaaagaa
acaaatagtgaaaagcaggagcctattaattggtcttgggtcacattaacagctaaacag
gtggtaaatgtcatggtctctgtgttgtacaatcccagcaagttctattgccagttatta
aacaaagatgatttgaatgctcttaaagaactcaacttatctttagcagagtactgtgag
aaaacaaaacccaatgtttcccaagtaacaaaagggatggtatatggtgcttatttttct
ggtgatggtagatggtatcgcgcctttgtaaaagatgtcatttcacttgaagtaattaaa
gttcaatttgtagattatggaaattgtgaagaaattactttagataaaattagacatatt
tcatctacattctttaaacttccatttcagggaatcaaatgttggctttcaggtgtgaga
cccaaaaataatacatggactacagaagctataacaacctttcagatgtatgcaactgag
aaaaaactgcatgccagagtaatttctgtaatgaagaatggtgctgaagtggagcttatt
gataattctaatagcattcccatgatcagtgaaatattaataaggaaacacttggctttt
aaagaagactcactattaaatccaaatacattaccagttacgtctaccagcatgcagtgg
acaatgccagcattttctattggtgatacattatcggctcttgtgttagatgtggtagat
cctggcttattttatgttgtaccaaaagaaatgaaagtggattcacaaaagctccataaa
ctaatgattgaacttgcagactattgctgtgctcaaaatgattgcaccttccaaccaaag
attggtgagccctgttgtgccaggttctcaggtgatgataaatggtaccgtgctataatt
ttggggattcatgaatcagaaataaaaatcgtgtatgctgattatggaattgtggagatg
ttgcctttctctagacttcagcctataactgccccctacttacagttaccgtttcaaata
cttaaatgttccttagcagatattatgggactggatggaaagtggtccatatcagcaata
gagaagctgaaaagtctcttaatgaatgccaatgtaatgattacagtgaaagaagtttct
caaaatatttatccagtaattgtgcaaaaaaagagtgaaaatcgtgttatggatatagca
gaacagttaataattgaaaatttggcaaaatatagcaataatgggaatcaatgttcaaag
acaacagattgttcctgcatagagttgaaaaagcaagttgcaaaacttgaacaggttctt
tattttctcctgaaagatcgctttggtgaagataacattcctaacattatgaaggccttt
gaaaaataa
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