Crotalus tigris (Tiger rattlesnake): 120312536
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Entry
120312536 CDS
T08476
Symbol
SFPQ
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ctig01009
]
120312536 (SFPQ)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ctig03021
]
120312536 (SFPQ)
03041 Spliceosome [BR:
ctig03041
]
120312536 (SFPQ)
Protein phosphatases and associated proteins [BR:
ctig01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120312536 (SFPQ)
Transcription machinery [BR:
ctig03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
120312536 (SFPQ)
Spliceosome [BR:
ctig03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
120312536 (SFPQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
120312536
NCBI-ProteinID:
XP_039209303
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MSRDRFRSRGGGFHRRGGGGGRGGLPGNHDFRSPPPGMAGGMGQPRGGHHHMGGGGGGGG
GGVQVKQEPTKPPSSTSTPPSSAASVSASPASSSPSLGPNQNQVGAPASTSSSASSVSTP
SSVSAPAAPSGLQSGSRGGETQPPPPQTNAPPNQSPGQGGSKKGPGPSPGGGGGPTGGLK
GGPGGPQSGGGSKSSGGGGGGSGQQHRGGERRGGQHQHQSHHHQHPPPPQSQHQGAGDEK
MSDAEGFKANLSLLRRPGEKTYTQRCRLFVGNLPADITEDEFKRLFSKYGEPGEVFINKG
KGFGFIKLESRALAEIAKAELDDIPMRGRQLRVRFATHAAALSVRNLSPYVSNELLEEAF
SQFGPIERAIVIVDDRGRSTGKGIVEFASKPAARKAFERCTEGVFLLTTTPRPVIVEPLE
QLDDEDGLPEKLAQKNPMYQKERETPPRFAQPGSFEYEYSQRWKSLDEMEKQQRDQVEKN
MKDAKDKLESEMEDAYHEHQANLLRQDLMRRQEELRRMEELHNQEMQKRKEMQLRQEEER
RRREEEMMIRQREMEEQMRRQREESYTRMGYMDPRERDMRMGGTSAMNMGDPYGTSAQKF
PPLAGGTGLGYETNPGVGQTSMSGTMMGSDMRPERFGQGGAGPVGGQGPRGMGPSAPAAY
GRGREEYEGPNKKPRF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagagaccgttttcgaagccgtggaggcggcttccatcggcgcggcggcggcgga
ggccgaggtggcctccccggcaaccacgactttcgttctccgccgccgggcatggcgggc
ggtatggggcaaccgcgcggcggccaccatcatatgggcggcggcggcggcggcggcggc
ggcggcgtccaggtgaagcaggagcctactaaaccgccgagctcgacctccactccgcct
tcctccgctgcctccgtttccgccagtccggcaagctcgtcgccttccttggggccgaac
cagaatcaggtcggcgcgccggcctcgacctcgtcttccgcctcctccgtttccacacca
agttcggtctcggcaccagccgccccctcagggctccagagcggcagccgaggaggggag
acgcagccgccgccgccgcagacgaacgcgccgccgaaccaaagtcccgggcaaggcggt
tccaagaagggacccgggccttctcccggaggtggagggggacccacaggtggcctgaaa
ggaggcccgggagggccgcagtcaggaggcggctccaagagcagcggcggcggcggcggc
gggtccggacagcaacaccgaggcggcgaaaggcgcggggggcagcaccagcaccagtct
caccatcaccaacacccacccccgccccaatcgcagcaccagggcgcgggggacgagaag
atgtccgacgctgagggttttaaagcaaatctgtcactcttgagacgccctggagagaaa
acatacactcagcgctgccgtctgtttgttgggaatttgcctgctgatatcaccgaagat
gagtttaagagattattttccaaatatggcgaaccaggagaggtcttcattaacaagggg
aaaggttttggctttattaagctggaatcccgagctttggctgaaattgcaaaggcagaa
cttgatgatattcctatgagaggaaggcagcttcgtgtgcgttttgccacccatgctgct
gctctttctgtgcgtaatctctccccttatgtgtcaaacgaattgctggaagaagctttc
tctcaatttggaccaattgaaagagctattgtgatagtagatgatcgcggcagatccaca
ggaaagggcattgtggaatttgcatctaagcctgcagctcgaaaagcatttgaacgttgc
actgaaggtgtctttcttctgacaaccactcctaggccagttattgtggagcctcttgaa
cagctagatgatgaagatggtcttccagaaaagctggctcagaaaaatccaatgtatcaa
aaggagagagaaactcctccacgatttgcacaacctggaagttttgagtatgaatattct
caacggtggaaatccttggatgaaatggagaaacagcagagagatcaagtagagaaaaac
atgaaagatgccaaggacaaactggaaagcgagatggaggatgcttatcatgaacatcag
gcaaaccttttacgccaagatctcatgaggcgacaagaggaattgagacgcatggaggaa
cttcacaatcaagagatgcagaaacgaaaagaaatgcagttgaggcaagaagaagagcga
cgtaggcgggaagaagagatgatgatccgtcagcgtgagatggaagaacaaatgcgaaga
cagagggaagaaagctacactagaatgggttacatggatcctagagaaagagacatgaga
atgggtggtaccagtgcaatgaacatgggagatccctatggtacatctgctcagaaattc
ccaccattagcaggtggcactggccttggctatgagaccaatccaggagttggacaaaca
tctatgagtggcactatgatgggaagcgatatgcgccctgagcgatttggacagggaggt
gcggggcctgtaggtggccagggccctagaggaatggggcccagcgctcctgcagcttat
gggagagggagagaagaatatgaaggcccaaacaaaaagccccggttttag
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integrated database retrieval system
