Crotalus tigris (Tiger rattlesnake): 120312588
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Entry
120312588 CDS
T08476
Symbol
PKD1L2
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ctig04040
]
120312588 (PKD1L2)
04091 Lectins [BR:
ctig04091
]
120312588 (PKD1L2)
Ion channels [BR:
ctig04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120312588 (PKD1L2)
Lectins [BR:
ctig04091
]
C-Type lectins
Others
120312588 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
REJ
SUEL_Lectin
Ion_trans
Lectin_C
GPS
Abhydrolase_9_N
DUF4303
Motif
Other DBs
NCBI-GeneID:
120312588
NCBI-ProteinID:
XP_039209410
LinkDB
All DBs
Position
Unknown
AA seq
2480 aa
AA seq
DB search
MHFLSVIFILLVSWSTGEDLSLAEEIPCSKYQVAFNRSCYEFVRLQRTFTSAQSWCERGG
GHLAFIGNEETQTFLEEHVSEDKEWWIGITYTSSNETNEGSMIWLDTSNITYSKWSQDPP
SVFASSCGYILKNADYQWGVTENCSQEFDFICEFESGHSIACDNSNATVQCGSGEVIQIG
ESFYGRKTPHYCVLETPLQFDDEEECSWISVKDEVAGQCLGLQACQVAADGTFFGEPCPG
LGSYLSVQYHCMEGLSLTVTENMFVLENVTISLKWLLSPYSGNLSCIISTGDGNTVDPYY
PSSLHSNVTHCYTVPGEFTVFVECTTSEWHVTAQKLITVRDKMDKVTVTGCFSKYEVGNS
SYCRTLYEETLWIQVELDGGTGVTYTILSDNKTVLETSTKLGTAPHNLTLDREPQRLMGP
GVHSLEIVATSNTTDSEVKETLNVHLVEPISGLQAMLTSDSLESGEDLEIKVSVRHGAPE
KVRFEVTGMNETFSHLKDFVEGKSEIYTIPMNSEGTFLVKVFVMNAFSNMSVDVGSVTVS
NSSHKKDPLANEEQSSTNGKIRLDDKGKNRIYISPSRHAGVFATVILGWPETHSNNSLYT
WSCGFCWPLWDECVQQQSINTVQREIRIPPNCLPPPSSAVTVKVVVKTPEKEEKQDEQCL
YITAKQDLSLRISCERNCNPVNISEDVILKVSMREGIKPVLYKWYLDHTFKRKPNALPPG
CNLNGFPQSSLTFLQNDTEILLLNSSFLQSQGEAFQIKATALSENKYGEETYIVSSVPPP
VAPECSVSPPQGSVLTSFSISCHTSCLLDQCPPVYSSSFTYCFYLEPNSLFHCGQDPFLP
LVYLPLGEEDNDFVVHIKIAVTNNYGHIVYSNATVRVQPEDINSGNQTLQAMILEKSNSI
LKEENNSMSLFQLYKSVSSVLNQETKEATFNSFLQTNTRKELRELMLTTLSGVNLTSMQT
ALKMSEVLKEITYRSEELSSSAQVEASHTLKSVSESLLVVDTEDREDHLKRKEAASYLFS
AVSNVLEATVQNETEESPALEMAQNSVSQELITTVENLQSALLFGKLPDSEPLVLIAPSA
AMYINRLQTENVNSTAIKISDSSSAAFTLPSASSLSISGDSDETVDIRMVSFSVNPFSSS
DSFDIHGTVGGLTLTSLDGLVIPVYDLSEDIEIRLPRSPVTQEDKNILNLGNFTAVQFNV
TTVDSSLVIYLEMDQNIPLILYLGYDYLPNETDHELMARLPHNRNTRDEIYSWVLQPEDL
IFGEGMYYFVVRPDTELDFLASNEMNISITSFVSQCVFWDEHRKSWNSYGCRVGPKTTPG
DTQCLCNHLTFFGSSFFVMPNTIDVSKTVELFATFVDNPVVVTTVGCIFLVYLLVLIWAR
RKDIQDDAKVKITLLEDNDPFAQYRYLVTVFTGHRRGAATTSKVTLTLYGQEGESEPHHL
VDPDTPVFERGAVDVFLLCTLFPLGELQSVRLWHDNSGSSPAWYVNRLLVHDVATDQKWY
FLCNSWLAIDVGDCVLDKVFPVATEQDMKQFSNLFFMKTSRGFRDSHIWYSIFNRCPRSS
FTRVQRVSCCFSLLLCTMLTSIMFWGVPKDPADQKMDLGKIEFTWQEVMIGFESSILMFP
INLLIVQIFRNIRSRFKKEQKPGKSGRVSPDLPSLSQQSPPNVSLTAEAVIKDIRRIANS
LFKTLKAPLPSSDPDFSKSTDINKLLALVEDIICQQNRVGEEFYDESKKKEDPIIITLGL
VDLQEKRRTPTPERGMVERLKHRDYKRCLHAQLQHVELELELLGPHRFQDPQSYTQAVRQ
VQHMKLFLESQLCSATPDSERNSPTLSLPGDSKKELTPKGLPGWFVFVGWFLVILTSGVS
GFFTMLYGLHYGKDNSIKWLISMAISFFESLFITQPLKVLGFAAFFALVLKKVEQEDEEA
TSIDGPLSVTGDPTPIFGARRDSGNNIYQPPPATDIEKMKMDHIKEQKAFALIREILAYL
GFLWMLLLVAYGQRDPNSYYLNKHIENSFTEGFEEILSYQDFFKWARTVLIGNLYGPYEG
FITDGNSKLVGSAWIRQVRVKGNSCPIDPSLELTVRECHAAYSFDTEDMGDYGINWNGSS
LDNCSEFYSAWQYQSQARLRGHSIWGKLAVYRGGGYIVHLGMDSTNASRILQYLFDNTWL
DSFTRAVFVEFTVYNANVNLFCIISLMFETNALGAFFPRAELQSIRLYPYTDGLHIFVVA
AEIIYFLFVIYYMVEQVKILRALKWNYFHSKWNLLELAIILISWSALSVFVRRMILGLKD
ISYYQEHKDEFVSFNQTATVDAVLGYLIAFLVLLSTVKLWHLLRLNPKLNMITSTLRRAW
GDISGFATVIIIMFLAYSIATNLIYGWKLNSYKTLFDSAETMVSLQLGIFNYEEVLDYNP
ILGSFLIGSCIIFMTFVVLNLFISVILVAFSEEQKHYQVSEEEEIVDLMLKKMCSFLGIK
YKNDRVPVCGKQLQASGNDM
NT seq
7443 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcttagtgtaatttttatactcctagtttcctggtctacaggagaggactta
tccctggcagaagagatcccttgttcaaagtatcaagtggctttcaatcgctcatgctac
gaatttgtgagactccaacgcacgttcacaagtgcccagagctggtgtgagagaggaggt
ggccatttggcctttattgggaatgaagagactcagacgttcttggaggaacatgtctcc
gaggacaaggagtggtggattggtataacctatacctcttcaaacgaaaccaatgaagga
tccatgatttggttagatacttcgaacatcacttacagcaagtggtcccaagatccgccc
tcggtctttgcatcatcctgtggctatatcctgaagaatgctgactaccagtggggagta
actgagaactgcagccaggagttcgactttatttgtgaatttgaatcaggccacagcatt
gcttgcgacaactccaatgccaccgtgcagtgtggatcaggagaagtcatccagatcgga
gagagtttctatgggcggaaaactcctcactactgtgtccttgagacgcccttgcagttt
gatgatgaagaagagtgcagttggattagtgtgaaagatgaagttgcagggcaatgtctt
gggctccaagcatgccaagttgcagcggatggaacctttttcggagagccttgcccaggt
ttgggaagctacctctctgtccaataccattgcatggaaggcttgagcttgacggtgaca
gagaacatgtttgtactggaaaatgtcaccatctccttgaaatggctgctgtcaccatac
tctggaaacctctcctgcataattagcactggagatggcaacacggtggacccctactac
ccttcaagcttgcatagcaatgtgacccactgctatacagtgccaggcgaattcaccgtt
tttgtggaatgtactaccagtgagtggcacgtgactgctcaaaaactcatcactgttcga
gataaaatggataaggtcacagtgaccgggtgcttcagcaaatacgaagtggggaacagc
tcttattgcaggaccctttatgaggaaaccttatggattcaagtagaacttgatggaggg
actggagtaacctacactatattaagtgataacaagactgtgttggagaccagcacaaaa
ttaggaactgcccctcataatctaaccttggacagggagcctcaacggctgatgggccct
ggagtacattcccttgaaatagttgccaccagcaacaccacagattcagaggtcaaagaa
accctgaatgttcatttagtggagccgatttctggtctccaagctatgttaacctccgac
tccttggaatcaggagaagacctggaaatcaaagtctctgtacgtcatggcgcccccgaa
aaagtgagatttgaagtgaccgggatgaatgaaacattttcccacctgaaggattttgtt
gaaggaaagtctgaaatttatacaatcccaatgaattctgaaggtacttttctggtcaaa
gtgtttgtgatgaatgccttctcaaacatgagtgttgatgttggaagtgtcacagtgtct
aacagttctcataaaaaagatcctctggcgaatgaagaacaatccagcacaaatgggaaa
ataagacttgatgacaaggggaaaaataggatatacatttcacctagccgccatgctggt
gtctttgcgacagtgatcttgggttggcctgagacacacagcaacaactcactctacact
tggtcttgtgggttctgctggcctctgtgggatgaatgtgtgcagcaacaatctatcaac
accgtacaaagagagatccggataccccccaactgcctgcctcctcccagctctgcagtg
acagtgaaggttgtggtgaaaaccccagaaaaagaggagaagcaggatgaacaatgtttg
tacatcacagcaaaacaagatttgagcctgaggatcagctgtgagaggaactgcaatcct
gtgaatatcagtgaagatgttatacttaaagtctcaatgagggaaggcataaagcctgta
ctctacaagtggtatttagatcacaccttcaaaagaaagcctaatgcgcttcctccagga
tgcaacttaaatggtttcccacagagctcactcacttttcttcagaacgatactgaaatt
cttctcctgaacagctccttcttgcagtcacaaggcgaagcctttcagatcaaagcaaca
gctctgagtgagaacaaatatggagaagaaacttacattgtcagctcggtgcctcctcca
gtagctccagaatgttctgtatcgcctcctcaaggatcagtgctcaccagcttctccatc
tcttgccacacttcctgcttattggaccagtgccctccagtttatagctcttcattcaca
tattgcttctacctggaaccaaattcactctttcactgtggacaagatccattcctaccc
ttggtctatcttccgttgggagaagaagacaatgactttgttgtacatattaaaattgca
gtgaccaataattatggccatattgtttattcaaatgccaccgtcagggttcaacctgaa
gatataaacagtgggaaccaaactttgcaggctatgattttggaaaaatcaaacagcatc
ctaaaagaagagaataatagcatgtccctctttcagctgtacaagtcagtgtcttccgtt
cttaatcaagaaacgaaagaagccacctttaattcatttctgcagacaaatacacggaaa
gagcttagagagctaatgctgacaaccctttcaggagtcaatctcacatcgatgcagaca
gccctcaaaatgtcagaagtcctcaaagaaatcacttacaggagcgaagagctctcttct
tctgcccaggtggaagctagtcatactctgaagagtgttagtgaatccttactagtggtg
gacacagaggatagagaagatcatctaaagcgcaaggaggctgccagctaccttttcagc
gcagtaagcaatgtcctagaagctactgtgcagaatgaaacagaagaatcccctgctctt
gagatggcacagaattcagtctcgcaagaactcataaccacagttgaaaaccttcagagt
gctctactttttggaaaattgcccgacagtgagcctttggtgctaatagctccttctgca
gctatgtatatcaacaggttgcagaccgagaatgtcaacagcacggccattaaaatctcc
gactccagttctgcggctttcacgctcccttctgcttcttctctcagcatctcgggagac
agcgacgagaccgtggacatcaggatggtgagcttctctgtaaatcccttttcctcaagt
gactcatttgatatccatggaactgttggaggcctcactcttaccagcctagatggattg
gtcattccagtatatgatctttcagaagatattgagatacggttacccaggagtcctgta
acccaagaggacaagaatatattgaatctgggaaatttcacagctgtccaattcaacgtg
actacagtagactcatctctagtgatctacctggagatggatcaaaatattccacttatc
ctttatttgggatatgattatcttccaaacgagactgatcatgaactgatggcacgtctt
cctcacaacagaaataccagagatgagatatattcttgggtgcttcaaccagaagatctg
atctttggagaagggatgtattattttgtcgtgagaccagacacagaattggacttcctt
gcttccaatgaaatgaacatttccatcacttcctttgtgtcccaatgtgtattctgggat
gagcaccgaaagagttggaatagctatggatgccgtgttggtcccaaaacaactcctggg
gatactcaatgtctctgtaaccacctgaccttctttggcagctctttctttgtcatgcca
aacaccatcgatgtcagcaaaactgtggagctgtttgccacttttgtggacaacccagtg
gtggtgaccacggtaggctgcatcttcctcgtctaccttctggttctgatctgggccaga
agaaaagacatccaagatgatgccaaagtgaagataaccctcctggaagacaacgatcct
tttgcgcaatatcgttatctggtgaccgtttttactgggcatcgccgaggtgcagctaca
acttctaaggtgactctcaccttgtatggccaggaaggagagagtgagccacaccacttg
gtggaccccgataccccagttttcgagcgaggggctgtggatgtctttcttttgtgtacc
ctttttcctcttggggaactacagagtgtcagactgtggcatgacaattcaggatcgagc
cctgcctggtacgtgaatcgtcttctcgtccatgatgtggccactgaccagaagtggtat
tttctttgtaactcttggctggccattgacgtgggagactgtgtcctagataaagtattc
cctgtggccactgaacaagacatgaagcagttcagcaatctttttttcatgaagacttcc
agaggctttcgtgatagccatatctggtactccattttcaaccgttgtccacgcagctct
ttcacacgagtgcaaagagtgtcctgttgcttttcacttcttctatgcaccatgttgacc
agcatcatgttttggggggtgcccaaggatccagcagaccaaaaaatggatttaggcaag
atagaattcacatggcaggaggtgatgattggctttgaaagctccatcctgatgttcccc
atcaacttgctcatcgtccaaatcttccggaatatccgttctcgttttaagaaagagcag
aaaccaggaaaaagtgggcgcgtgtcccctgacctgccttctctttcccaacaatccccc
ccaaatgtgtccctcactgctgaggctgtgatcaaggatattaggaggattgccaattcc
ctgttcaaaaccttgaaggcccctttaccttcctcggatcctgatttcagtaaatcgact
gatatcaacaagctgctggccctggtggaggacatcatctgccagcagaacagggtggga
gaggaattttacgatgagagcaaaaagaaagaggacccaattatcattaccctcgggctg
gtggatctgcaagaaaagagaaggacgccaaccccagagagagggatggtggaaaggctg
aagcatcgggactacaagcgttgcctccatgcccagctgcagcacgtggaacttgaactg
gagctgctggggcctcatcgcttccaggacccgcaaagctacacccaagcagttaggcag
gttcagcacatgaagctctttttggaaagtcagctctgctctgcaacgcctgacagcgaa
aggaactcaccaacgctgagccttcctggagacagcaagaaagaattgacacctaaaggt
ttgcccgggtggtttgtgtttgtcggctggttcttggtgatccttaccagtggagtctct
ggttttttcaccatgctgtatggactgcactatggcaaggataactccatcaagtggctg
atctccatggccatctctttctttgagagcctcttcatcacccagccgttaaaggttctt
ggttttgctgctttctttgctctggttctgaaaaaggtggaacaggaagatgaggaggcc
acatctattgatggtccgttgtcggtcacaggtgacccaactcctatctttggggcacgc
agagatagtggaaataacatctaccagcctcctcctgcgactgacattgagaaaatgaag
atggaccacatcaaggaacagaaagcttttgccctgattcgagaaatattggcctacttg
ggattcttatggatgctgctcctggttgcctacggacagcgtgacccaaactcctattat
ctcaacaaacatattgagaacagtttcacagaaggatttgaagagattttaagctatcag
gacttcttcaagtgggcaagaaccgtcttaatcggcaacctatatgggccatatgaaggt
ttcatcacagatggcaactccaaactggtgggcagtgcttggattcgtcaagtgagggtc
aagggcaactcctgccccattgatcccagcttagagttgacggtcagagagtgtcacgct
gcctattcctttgacaccgaggacatgggagactatggcatcaactggaacggctcttcc
ttggacaactgttccgagttctattcagcttggcaatatcagagccaggcaagactaaga
ggacactccatctggggcaagctggctgtttacagagggggaggctacatcgtgcacctg
gggatggattccaccaatgcctccagaattctccaatacctgttcgataacacctggctg
gatagctttacaagagctgtgtttgtcgagttcaccgtctacaatgccaacgtgaacctg
ttttgcatcataagcctgatgtttgaaaccaacgccttaggagctttctttccacgggct
gaattgcaaagtatccggctttatccatacaccgatggtctacatatctttgttgttgca
gcagaaataatttatttcctcttcgttatctactacatggtggagcaggtgaaaatcctg
cgggctctgaaatggaattatttccacagcaaatggaacctcctggagttggccatcatc
ttgatcagctggagtgccctgtctgttttcgttcggaggatgatcttgggcttaaaggac
atcagttactaccaggaacataaggatgagtttgtgagcttcaatcaaacagctacggtg
gatgcggtgctgggttacctgattgcgttcctggtgcttctttccaccgtgaagctttgg
cacctgctgagactcaaccccaagttaaacatgatcacctccaccttgcgaagagcctgg
ggggacatatcaggatttgccaccgtgattatcatcatgttcctagcttattccatcgct
acaaatctaatatatggctggaaactgaattcatacaagactctgtttgattctgctgag
actatggtcagccttcagttaggaattttcaactatgaagaggtcttggattacaaccct
atcttgggctccttcttgattggttcctgcatcatcttcatgacatttgtggtgctgaac
ctcttcatctcggtcatcctggtggcttttagcgaggagcagaaacattatcaggtttca
gaagaagaggagatagtggacctcatgctgaagaaaatgtgcagttttcttggaattaaa
tataaaaatgaccgcgttccagtttgtggcaagcagctgcaagcatctgggaatgacatg
taa
DBGET
integrated database retrieval system
