KEGG   Crotalus tigris (Tiger rattlesnake): 120312647
Entry
120312647         CDS       T08476                                 
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
ctig  Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:ctig00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ctig04812]
    120312647 (KATNB1)
Cytoskeleton proteins [BR:ctig04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     120312647 (KATNB1)
SSDB
Motif
Pfam: WD40 WD40_Prp19 Katanin_con80 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_IFT122_1st WDR90_beta-prop_4th RMC1_N eIF2A Beta-prop_RIG_1st Beta-prop_WDR19_1st PROPPIN WDR54 VPS8_N Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_LRRK2 Beta-prop_WDR35_TULP_N Beta-prop_WDR11_1st
Other DBs
NCBI-GeneID: 120312647
NCBI-ProteinID: XP_039209602
LinkDB
Position
Unknown
AA seq 658 aa
MAAAVATKTAWKLQEIIAHSSNVSSLVLGKSSGRLLATGGDDCRVNIWSVNKPNCIMSLT
GHTTPVESVKINTNEELIVAGSQSGSIRIWDLEAAKILRTLMGHKANICSLDFHPYGGFV
ASGSMDTNIKLWDVRKKSCVFRYKGHTGAVRCLRFSPDGKWLASSSDDHTVKLWDLAAGK
IMFEFTGHTGPVNVIEFHPNEYLLASGSSDRTVRFWDLEKFHTVSCIEEEATPVRCVLFN
PDGCCLYAGSQDALRVYGWEPERCFEVVLVNWGKVADLSICNNQLIGVSFIQSTVSSYVV
DLSKITKCGSGLHGLIRDDKPLSPPPTLGSSLRRIYERPATSCSKPQRMKHNSESERRSP
SSEDDREERESTAEIQNLEDYKEIFQPKNSITRTPPSKSEPFPAPPEDEAALAKEASRAG
QAGDAESPSPGQEGQTDPVQRQPVAASTPITRVEPLVIPAARNEPIGLKASDFLPAVKNQ
GLTEIVDEEALSQIRKGHETMCVVLTSRHKNLDTVRAVWSTGDIKTSVDSAVAINDLSVI
VDLLNIVNQKASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCASLKLILQRFLPLITDIL
TAPPSVGVDISREERLQKCHVCYKQLKAISTFIKNRSGLSGRHGSAFRELHLLMAVLE
NT seq 1977 nt   +upstreamnt  +downstreamnt
atggcggcggccgtggccaccaagacggcctggaagctgcaggagatcattgcccacagc
agcaatgtttcttccctcgttttgggcaaaagctcaggccggctcctggcaactggtgga
gatgattgtcgagttaatatttggtcagttaacaagcccaactgcattatgagtttaact
ggccacacaacgccagtggagagtgtgaaaattaatacaaatgaagagctcattgttgca
ggatctcagtcaggctccattcggatctgggacttggaagctgccaaaatcctccgtaca
ctaatgggccataaagccaatatttgcagccttgatttccatccgtacggaggcttcgta
gcttcggggtccatggacaccaacatcaagctttgggatgtaagaaaaaaaagttgtgtc
ttcaggtacaagggccacacaggagcggttcggtgtctccgcttcagtccggatgggaag
tggctggcatcttcctctgatgaccacacagtgaagttgtgggacctggctgctgggaag
atcatgtttgagttcacaggacacaccgggcctgtcaacgtcattgaattccaccccaac
gagtaccttttggcctcggggagctccgacaggacagtcagattctgggacttggagaag
ttccacacagtgagctgcattgaggaagaggccacgcctgttaggtgcgtgcttttcaac
cctgatggctgctgcttgtatgccggcagccaggatgccctgcgagtctatggctgggag
cccgagcgatgttttgaagtggttttggtgaattggggcaaagtggccgatttgtctatc
tgtaacaatcagttgattggcgtttcttttatccaaagcaccgtctcatcatacgttgta
gacctcagcaaaatcacaaaatgtgggtctggactccatggactgatcagagatgacaag
ccgctgagcccgcccccaactctgggctcctccctgcgacgcatctatgaaaggccagca
acctcctgcagcaagccccagagaatgaaacacaactcggagagcgagaggcgcagtcca
agcagtgaggatgacagggaggaaagggaatccactgcagagatccagaacttggaggat
tacaaagagatattccagccaaagaactctatcacacgaactccccccagcaagagcgag
cctttccctgcccctccggaagatgaggcagcacttgcaaaagaagcctcgcgggctggt
caagcaggagatgccgagtccccctcgccaggccaggaggggcagacagaccctgttcag
aggcagcccgtagctgcctcaaccccaatcacccgagtggagcccttggtgattccagct
gccaggaatgagcctattgggctgaaggcctctgacttcctgccggccgtgaagaaccag
ggcctaacggaaatcgtagacgaggaggccctgtcccagatccggaagggccacgagacc
atgtgtgttgtgctgaccagtcgccataagaatttggacaccgtgagagcggtgtggagc
actggggacatcaagacttcagtagactctgcggtggccatcaatgacctctcagtgatc
gttgaccttctgaacattgtaaaccaaaaggcatctctttggaaactggatctgtgcacg
gttgtcttgccacaaatagaaaagcttctgcaaagcaaatatgaaagttacgttcagaca
ggctgtgcgtccctgaagctaattctgcaaaggtttctgcccctgattacggacatcctc
accgcacccccgtcggtgggagtggacatctcccgagaagagaggctccagaagtgccac
gtgtgctacaaacaactgaaggccatcagcactttcatcaagaaccggtctggcctcagt
ggccgccacggcagtgccttccgggagctgcacctcctgatggccgtcctggagtga

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