Crotalus tigris (Tiger rattlesnake): 120312647
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Entry
120312647 CDS
T08476
Symbol
KATNB1
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ctig04812
]
120312647 (KATNB1)
Cytoskeleton proteins [BR:
ctig04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
120312647 (KATNB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Katanin_con80
WD40_Gbeta
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
ANAPC4_WD40
Beta-prop_DCAF4
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR41
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_VPS8
WDR90_beta-prop_4th
RMC1_N
Beta-prop_WDR19_1st
eIF2A
Beta-prop_RIG_1st
PROPPIN
WDR54
Beta-prop_pof12
VPS8_N
Beta-prop_IP5PC_F
Beta-prop_ACSF4
Tricorn_2nd
Beta-prop_LRRK2
Beta-prop_WDR35_TULP_N
Beta-prop_WDR11_1st
Tricorn_N
Motif
Other DBs
NCBI-GeneID:
120312647
NCBI-ProteinID:
XP_039209602
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MAAAVATKTAWKLQEIIAHSSNVSSLVLGKSSGRLLATGGDDCRVNIWSVNKPNCIMSLT
GHTTPVESVKINTNEELIVAGSQSGSIRIWDLEAAKILRTLMGHKANICSLDFHPYGGFV
ASGSMDTNIKLWDVRKKSCVFRYKGHTGAVRCLRFSPDGKWLASSSDDHTVKLWDLAAGK
IMFEFTGHTGPVNVIEFHPNEYLLASGSSDRTVRFWDLEKFHTVSCIEEEATPVRCVLFN
PDGCCLYAGSQDALRVYGWEPERCFEVVLVNWGKVADLSICNNQLIGVSFIQSTVSSYVV
DLSKITKCGSGLHGLIRDDKPLSPPPTLGSSLRRIYERPATSCSKPQRMKHNSESERRSP
SSEDDREERESTAEIQNLEDYKEIFQPKNSITRTPPSKSEPFPAPPEDEAALAKEASRAG
QAGDAESPSPGQEGQTDPVQRQPVAASTPITRVEPLVIPAARNEPIGLKASDFLPAVKNQ
GLTEIVDEEALSQIRKGHETMCVVLTSRHKNLDTVRAVWSTGDIKTSVDSAVAINDLSVI
VDLLNIVNQKASLWKLDLCTVVLPQIEKLLQSKYESYVQTGCASLKLILQRFLPLITDIL
TAPPSVGVDISREERLQKCHVCYKQLKAISTFIKNRSGLSGRHGSAFRELHLLMAVLE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgtggccaccaagacggcctggaagctgcaggagatcattgcccacagc
agcaatgtttcttccctcgttttgggcaaaagctcaggccggctcctggcaactggtgga
gatgattgtcgagttaatatttggtcagttaacaagcccaactgcattatgagtttaact
ggccacacaacgccagtggagagtgtgaaaattaatacaaatgaagagctcattgttgca
ggatctcagtcaggctccattcggatctgggacttggaagctgccaaaatcctccgtaca
ctaatgggccataaagccaatatttgcagccttgatttccatccgtacggaggcttcgta
gcttcggggtccatggacaccaacatcaagctttgggatgtaagaaaaaaaagttgtgtc
ttcaggtacaagggccacacaggagcggttcggtgtctccgcttcagtccggatgggaag
tggctggcatcttcctctgatgaccacacagtgaagttgtgggacctggctgctgggaag
atcatgtttgagttcacaggacacaccgggcctgtcaacgtcattgaattccaccccaac
gagtaccttttggcctcggggagctccgacaggacagtcagattctgggacttggagaag
ttccacacagtgagctgcattgaggaagaggccacgcctgttaggtgcgtgcttttcaac
cctgatggctgctgcttgtatgccggcagccaggatgccctgcgagtctatggctgggag
cccgagcgatgttttgaagtggttttggtgaattggggcaaagtggccgatttgtctatc
tgtaacaatcagttgattggcgtttcttttatccaaagcaccgtctcatcatacgttgta
gacctcagcaaaatcacaaaatgtgggtctggactccatggactgatcagagatgacaag
ccgctgagcccgcccccaactctgggctcctccctgcgacgcatctatgaaaggccagca
acctcctgcagcaagccccagagaatgaaacacaactcggagagcgagaggcgcagtcca
agcagtgaggatgacagggaggaaagggaatccactgcagagatccagaacttggaggat
tacaaagagatattccagccaaagaactctatcacacgaactccccccagcaagagcgag
cctttccctgcccctccggaagatgaggcagcacttgcaaaagaagcctcgcgggctggt
caagcaggagatgccgagtccccctcgccaggccaggaggggcagacagaccctgttcag
aggcagcccgtagctgcctcaaccccaatcacccgagtggagcccttggtgattccagct
gccaggaatgagcctattgggctgaaggcctctgacttcctgccggccgtgaagaaccag
ggcctaacggaaatcgtagacgaggaggccctgtcccagatccggaagggccacgagacc
atgtgtgttgtgctgaccagtcgccataagaatttggacaccgtgagagcggtgtggagc
actggggacatcaagacttcagtagactctgcggtggccatcaatgacctctcagtgatc
gttgaccttctgaacattgtaaaccaaaaggcatctctttggaaactggatctgtgcacg
gttgtcttgccacaaatagaaaagcttctgcaaagcaaatatgaaagttacgttcagaca
ggctgtgcgtccctgaagctaattctgcaaaggtttctgcccctgattacggacatcctc
accgcacccccgtcggtgggagtggacatctcccgagaagagaggctccagaagtgccac
gtgtgctacaaacaactgaaggccatcagcactttcatcaagaaccggtctggcctcagt
ggccgccacggcagtgccttccgggagctgcacctcctgatggccgtcctggagtga
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