Crotalus tigris (Tiger rattlesnake): 120313018
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Entry
120313018 CDS
T08476
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04510
Focal adhesion
ctig04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120313018 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120313018 (LAMB1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
ATG17_like
ATG16
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
120313018
NCBI-ProteinID:
XP_039210424
LinkDB
All DBs
Position
Unknown
AA seq
1784 aa
AA seq
DB search
MGVFQVSFGCFLGLWAIVAGQGPEYSYGCAEGSCYPATGDLLIGRANKLIASSTCGLHKP
EPFCIVSHLQEDKKCFTCDSRDPFHETLNPDNHRIENVVTAFAPNRLKLWWQSENGVENV
TVQLDLEAEFHFTHLIMTFKTFRPSAMLIERSSDFGKTWQVYRYFAYDCENSFPGVSTGP
MKKVDDIICDSRYSDIEPSTEGEVIYRALDPAFRIEDPYSPRIQNMLKITNLRIQFAKLH
TLGDNLLDSRMEIREKYYYAIYDMVVRGNCFCYGHASECAPVHGYEEEVEGMVHGHCMCR
HNTKGLNCEQCLDFYHDLPWRPAEGRNSNACKKCNCNEHSVQCHFDMAVYLATGNTSGGV
CDDCQHNTVGHNCEQCKPFYFQHPERDVRDPHICEPCNCDPVGSQNGGICDRYTDYSAGL
IAGQCRCKFFVEGERCDTCKEGFYGLSIDDPLGCQSCACNPLGTHPGGNPCDSETGNCYC
KRLVTGRQCDQCLPENWGLSNDMDGCRPCDCDQGGSLNNNCSSETGQCQCRPHLIGRQCQ
EVEPGYFFISLDHYVYEAEDASFGPGVSLVERLYSQDRVPSWTGIGFVRVPEGAYLEFYI
DNIPFSMEYDVLIRYEPQLPDQWEKATISVYRPGQIPPSSRCGNTVPDDDDQEVSLSPGS
RYAVLPRPVCFEKGLNYTVRLELPQYSLNSEVENPYTLIDSLVLMPYCKSLDLFTVGGRG
DDVTTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHETALACQCDPQGSLS
SVCDPNGGHCQCRPNVVGRRCDKCAPGTFGFEPTGCKPCECHVQASANAFCHPETGQCHC
FHGVYGRQCDRCLPGYWGFPSCQPCQCNGHADECDPYSGQCLHCRDHTSGPNCERCLAGY
YGDPVLGSGDHCRPCPCPDGPESGRQFASGCYQDRITLQVVCICERGYKGSRCDECSSGF
FGNPEEIGGTCQPCQCHNNIDSSDPEACDKRTGLCLKCLFHTQGQHCQECKPGYYGWALQ
QDCRKCVCNYLGTVRQRCSGAEDCECERETGQCQCLPNVVGQNCDHCAPNTWQLSSGTGC
EPCACNLEHSFGPSCNEFTGQCQCMPGFGGRTCTECQEYFWGDPIVGCQACECDSRGIQT
LQCNRSSGQCICKEGVEGSRCDKCTRGYAGTFPDCAPCHQCFALWDIIVSELANKTQRFL
ERAKALKIAGVSGPYQETLHSVQEKLNEIQSIIAQNPATEPLQNIGDLLEEAEKLKTDVA
KKITDVEEKLSAVANDSSAVEAELRALEADAKSLHNAVKELAEQLEFIKISDVRGALDSI
TKYFQMSLDAEKRANASVLLPGSLVEQSAEMRLEVESLINDTEAMFKSTQEEQSRLLDEL
AGKLQSLDLAEVSEKVCGTPPGASCVDSPCGGLSCHTEDGTKHCGGPGCEGLVTVAHTAW
QKAIDFDRDILSALAEVEQLSKMVSEAKERADEARQNAQDVLLKTNATKQQVDRSNEDLR
KLIQQIRMFLTKEGADLDSIEAVANEVLNLEMPSTPEQLQTLADSIRDRVESLSDVETVL
QQSAGDIARAKALLDEAKKASKSATDVKVTADMVREALEEAGRAQTTAGDAIKLAEKDIE
GTQGLLASIASETGSVEDRLGNATLRMAELEKNVEMLREKAATNAEDIKAAEENIAVVNR
TTADVQKILDDSVNEKYKTVENLIAKKTGESANARKKAEELQNEAKILLEQANSKLQLLR
ELEDTYEKNQKILEEKAKQVMELEETVRGLLQAISQKVAIYSTC
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgggagttttccaggtgtcttttggctgtttcctaggtctctgggccattgtagcgggt
caaggaccagaatacagctacggatgtgcggaaggcagctgttatccggctacaggagac
ttgctgattggccgagccaacaagctgatagcctcctccacctgtggccttcacaaacct
gaaccattctgcattgtgagccacctccaggaggacaagaaatgttttacgtgcgattca
cgcgatccgttccacgagaccttgaatccggacaaccatcgtattgaaaacgtggtgacc
gcttttgctcccaatcgcctgaagctgtggtggcaatcagaaaacggagtagaaaacgtg
actgtccaattggatctagaggcggaattccattttacccacctcattatgaccttcaag
accttccgtccttctgccatgttaattgaaagatcatccgatttcggcaaaacgtggcaa
gtctaccgttattttgcctacgactgtgagaattcgttcccaggcgtctccactggaccc
atgaagaaagtcgacgacattatttgtgattcccgctattctgacattgaaccttccacc
gagggagaggtcatttaccgagctttggatcctgcttttcgaatagaagacccctacagc
ccacggattcaaaatatgttaaagattacaaatttaagaatccaatttgccaaactgcac
accctgggagataatcttctggattcaaggatggagatcagagaaaagtattattatgct
atttacgacatggtggtccgcgggaactgcttctgttacggacacgccagtgaatgcgcc
ccggtgcatggctatgaagaagaggtggaaggaatggtccacggccactgcatgtgtcgg
cacaacaccaaaggcttaaactgtgagcagtgcttggatttttaccatgatttgccatgg
cgtcccgccgaaggccgtaacagcaacgcctgcaaaaagtgcaattgcaacgagcattcc
gtgcagtgccatttcgatatggctgtttacttagcgactggaaacaccagcggtggggtg
tgtgacgattgtcaacataacacggtggggcacaattgtgagcagtgcaagcccttctac
ttccaacatccggagagggatgtccgcgatccgcatatttgtgaaccgtgtaactgcgac
cccgtcgggtctcaaaatggcggaatttgtgatcgttacaccgactactcagctggcctc
atcgcaggacagtgtcgctgcaaattctttgtggaaggggaacgttgtgacacctgcaaa
gaaggattttatggattaagcatagacgaccctctcggctgtcagtcttgtgcttgcaat
ccattgggcacgcatcccggagggaatccttgtgactccgagacaggaaactgctactgt
aaacgtctggttaccggaaggcagtgcgatcaatgtctgcctgaaaactggggactgagc
aatgatatggatgggtgtcgcccctgtgattgtgaccaaggtggttcactcaacaataac
tgctcaagtgaaactggccaatgccagtgcaggccgcatctgattggccgccagtgccag
gaagtggaacccggatattttttcatatctttagatcattatgtctatgaagcggaggac
gccagctttggccctggcgtgagtttggttgagcgcctctattctcaagatcgcgtacct
tcctggactggaatagggtttgtgagagtgcctgaaggagcctatttagaattctacata
gacaatatcccgttttcgatggaatacgatgttctcattcgatatgagcctcagttacca
gatcagtgggagaaagctaccatcagcgtgtatcgcccgggccaaattcctcctagtagt
agatgtggcaatactgttcctgacgatgacgatcaagaggtatctttatctcccggttcc
aggtatgccgtccttccacgccccgtatgcttcgaaaaaggcctgaattacaccgttcgg
ttggagctgccgcagtactccttgaactctgaggtggaaaatccgtacacgctcatcgat
tcacttgtcctcatgccctattgcaagtccctggacctcttcacggttggaggccgaggt
gacgacgtgacaaccaacagcgcgtgggaaacctttcaaagataccgttgcctggagaac
agcaggagcgttgtcaaaacccccatgacggatgtttgccggaatataatttttagcatc
tcagccctgttgcacgaaaccgcattggcttgccagtgtgacccacaaggttcgctgagt
tcggtgtgcgatcccaacggaggccattgtcagtgtcgaccaaatgtggttggccgaaga
tgcgataaatgcgccccgggcacctttggctttgaacccactggatgcaaaccctgcgag
tgtcacgtccaagcgtctgcaaacgccttctgccacccggagaccgggcagtgccattgt
ttccacggagtttacggccgtcagtgcgacagatgtttgcccggatactgggggttccca
agctgccagccctgtcagtgcaacggtcacgcggacgagtgcgatccctacagtggccag
tgcttgcattgtcgtgatcacacctcaggccccaactgtgagaggtgccttgctggttat
tatggagatccagtcttgggatcaggggatcactgccgtccttgcccgtgcccagacggt
ccggaaagtgggcgccagtttgccagtggctgttatcaagaccggattacgttacaagtg
gtgtgcatttgcgagagaggatataaaggaagtcgatgcgatgaatgttcctctggcttc
tttggaaaccccgaagagattggtgggacttgccagccctgccagtgtcacaacaacatc
gattcctctgatccagaggcctgtgacaagaggacaggcttgtgcctcaagtgtttgttt
cacacccagggccaacactgccaagagtgtaaacctggctactacggatgggctctccag
caagattgcagaaagtgtgtctgcaattacctggggacggtgcgccagcgctgcagcggc
gccgaagactgtgagtgtgagagagaaacgggccagtgtcaatgtctccctaacgtggtc
gggcagaattgtgatcactgcgctccaaacacgtggcaactcagcagcgggaccggatgc
gaaccctgcgcctgtaatctggagcattccttcggcccgtcttgcaacgagttcaccggg
cagtgccagtgtatgccaggattcgggggacgcacctgtacggaatgtcaagaatatttc
tggggtgaccctattgtgggctgtcaagcttgtgagtgtgattcacgaggcatccagact
cttcagtgtaaccggtccagtggccagtgtatctgtaaggaaggcgtggaaggatcccgt
tgtgataaatgcacccggggctatgccggaacgtttccagactgtgctccttgtcaccaa
tgctttgctctctgggatatcatcgtcagtgagttggccaacaagacccagagattcctg
gaaagagccaaagcgctgaagatcgcaggggtgagcggcccttaccaagagaccctccac
tcggtgcaggaaaagctgaacgagatccaaagcatcattgctcaaaatccggctaccgag
cctcttcagaacatcggcgacctcttggaggaagcagagaagctgaaaacagatgtggcc
aaaaagataacggacgtcgaagaaaagctgtctgccgtggcaaacgacagcagcgccgtg
gaggctgaactgcgggctttagaggcagatgcgaagagtttgcacaatgctgtgaaggaa
cttgccgaacagctggagttcataaagatctccgatgtccgaggcgccctggacagcatc
accaaatatttccagatgtcgctggatgcagaaaagagagccaatgcctccgttttgctt
cccggaagccttgttgagcagtccgccgaaatgcgcctggaagtggagagcctgattaac
gataccgaggccatgttcaagtctactcaggaagagcagtcccgcctcttggatgagcta
gcaggcaagctgcaaagtctggacttggctgaagtgtcggagaaggtgtgcgggactcct
ccgggggcttcctgtgtcgattccccctgtggcgggttgagttgccacactgaagatggg
acgaagcattgcggagggcccgggtgcgaaggcctggtgacggtggcccacaccgcctgg
cagaaagccatcgatttcgatcgagacatcttgagtgctctggcggaggtggagcagctc
tccaaaatggtttcggaagccaaagaaagagccgatgaagccaggcagaacgcccaagac
gtcttgctgaagaccaatgccaccaagcaacaggtagacaggagcaacgaggatctcaga
aaacttattcagcagatcagaatgtttttaacgaaagagggtgctgatcttgatagcatc
gaagccgtcgctaatgaagttctcaacctggagatgcccagcacacctgaacagctgcaa
accctggcagacagcattcgcgaccgtgtggaaagcctgtctgatgtggagaccgtcctt
cagcagagcgctggagatatcgcaagggcgaaggcgttgttagacgaagctaagaaagcc
agcaaaagcgcgacggatgtgaaagtcacggcggatatggtcagagaggcactagaagaa
gctggcagagcccaaacaacagctggagatgccatcaaactggcagagaaagatattgaa
ggaacgcaaggcttgcttgcctctattgcctccgaaactggctccgtggaagaccgtttg
gggaacgcgaccttgcgcatggcagaactggagaagaacgtggaaatgcttagagagaag
gcagccaccaatgcagaggatataaaagccgcggaagaaaacatcgcggtggttaatcga
accacagcagacgttcaaaaaatactagatgacagtgtgaatgagaaatacaaaacggta
gaaaacttaattgccaagaaaacaggggagtctgcaaatgcgaggaagaaagcagaggag
ctgcaaaacgaagccaaaattttgctagagcaagcaaacagcaaactgcagcttctcaga
gaactggaagacacgtatgaaaaaaatcagaaaatcctggaagagaaagctaaacaagta
atggaactggaggagaccgtccgaggcctcttgcaagccattagtcaaaaagtcgccatt
tacagcacctgctag
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