Crotalus tigris (Tiger rattlesnake): 120313033
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Entry
120313033 CDS
T08476
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig04110
Cell cycle
ctig04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120313033 (SMC3)
04114 Oocyte meiosis
120313033 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ctig03036
]
120313033 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ctig00535
]
120313033 (SMC3)
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120313033 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
120313033 (SMC3)
Proteoglycans [BR:
ctig00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
120313033 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
120313033
NCBI-ProteinID:
XP_039210452
LinkDB
All DBs
Position
Unknown
AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETNGEKSRQLRDAQQDARDKMEEIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELRSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYSKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLEHFRRKGINQHVLNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTLARSDDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSAESEKG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAEHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaagcaggtaattatccagggatttagaagttatagagatcaaactatagta
gatcccttcagttcaaaacataatgtcattgtgggcagaaatggttccggaaaaagcaac
tttttctatgcaattcagtttgttctcagtgatgaattcagtcatcttcgtcctgagcaa
aggctggctttgttgcatgaaggcacaggacctcgggttatctctgcgtttgtggaaatt
atttttgataactcagacaacagattgccgattgataaggaagaggtatctcttcgcaga
gtcattggagctaaaaaagaccaatatttcttagacaagaaaatggtgacgaaaaatgat
gtcatgaacctccttgaaagtgctggattttctcgcagcaatccctattatattgttaag
caaggaaagatcaatcagatggccacagctcctgattctcagaggctaaaattgctcaga
gaagtagctggaactagagtatatgatgaacgtaaagaagagagtatttccttgatgaag
gagacagaagggaaaagggagaaaataaatgagctgttgaagtatattgaagagcgatta
catactctggaagaggagaaggaagaattagctcagtatcaaaaatgggataaaatgagg
agagcattggaatataccatttataatcaggaactaaatgaaaccagagctaaacttgat
gaactttcagcgaaacgagaaacaaatggagagaaatcaaggcaattaagagatgcacaa
caggatgctcgagataaaatggaggaaattgaaagacaagtccgtgaactgaaaacaaag
atttcagctatgaaagaagagaaggagcaactcagtgctgagcgacaagaacagataaaa
caaaggaccaagttagagcttaaagcaaaagatttgcaagatgaacttgctggaaatagt
gaacaacggaaaagactattgaaggagagacagaaacttcttgaaaaaattgaagaaaag
cagaaagaactggcagaaacggaacccaagttcaacagtgtaaaagaaaaagaagaacga
ggaatcgccagactagcccaggctacccaggagagaactgatctttatgcaaagcaaggc
cgaggaagtcaatttacctctaaagaagaaagagataaatggattaagaaagaactcagg
tccttagatcaagctatcaatgacaagaaaagacagattgcagctatacataaggatttg
gaagatactgaggctaacaaagagaagaacctggaacagtacagtaaattggatcaagat
ctcaatgaagtgaaagctcgtgttgaagaactggacagaaaatattatgaagtgaaaaac
aaaaaagatgagctacagagtgaaagaaattatttgtggagagaagagaatgcagaacag
caagctcttgctgcaaagagagaggatttggagaagaaacaacaacttcttagagcagca
acaggaaaggctattctaaatggcattgatagcataaacaaggttctggagcattttcgt
cgtaaaggcattaatcaacatgttttgaatggctatcatggaatagtaatgaataacttt
gaatgtgagccggccttctacacctgtgttgaagttactgcaggaaatagattgttttat
cacattgtagattctgatgaggttagtactaaaatactgatggagttcaataaaatgaat
ctaccaggggaggtgacttttcttcctctgaacaaactggatgttagagatactgcatat
cctgaaacaaatgatgctattccaatgatcagtaaactgaggtacaatccaagattcgat
aaagcctttaaacacgtttttggaaagactcttatttgtcgaagcatggaagtatctaca
cagttggctagagcttttactatggattgtattactttggaaggtgatcaagtcagtcac
agaggggctttaactggaggttattatgatacaagaaagtctcgacttgaactccaaaaa
gatgttaggaaagcagaagaggaacttggagaacttgaagcaaaactcaatgaaaatctg
cgcagaaacattgaaagaattaataatgaaattgatcaactgatgaatcaaatgcagcag
atagaaacacagcaaagaaaattcaaggcttccagagacagcattttgtcagagatgaag
atgctgaaagagaagagacagcaatcagaaaaaacatttatgcctaagcaacgcagttta
caaagtttagaggcaagtttacatgctatggaatcaacccgagaatcattaaaagcggaa
ttgggaacagatctgttatctcaacttagcttagaggaccaaaaacgtgttgatgcactt
aatgatgaaatccgacagctacagcaagaaaacagacaacttttgaatgagaggatcaag
cttgaaggcatcatcactagagttgaaacctacctcaatgaaaatttaagaaagcgttta
gaccaagttgagcaggagctcaacgaactgagagagacagaaggtggcactgttcttaca
gccacaacgtctgaacttgaggcaatcaacaaacgagtaaaggatacattggctcgatca
gatgacttggacaattcaattgataaaacagaagctgggataaaagaacttcagaaaagc
atggagcgttggaagaatatggagaaagaacacatggatgctattaatcatgacacaaaa
gaacttgaaaagatgactaacaggcaaggtatgcttctgaagaaaaaagaagagtgtatg
aagaaaatcagagaactgggctctcttccccaagaagcctttgaaaaataccaaactttg
agcctaaagcagctctttcgcaagctggaacaatgcaacacagaattgaaaaaatatagc
cacgttaataaaaaggctctagatcaatttgtgaacttttcagaacagaaagaaaagttg
ataaaacgtcaagaagagttagataggggctacaaatccatcatggaattgatgaatgtc
cttgaactcagaaaatatgaagcgatccagctgactttcaaacaggtgtcaaagaatttc
agtgaagtgtttcagaagctggtgcctgggggcaaagcaacacttgtgatgaagaaaggt
gatgtggaaggtagtcagtctcaagatgaaggtgaaggcagtgctgagagtgaaaaggga
tcaggatctcaaagcagtgttccatccgtagaccagttcactggcgttggaattagggtg
tcatttactggtaaacaaggtgaaatgagagaaatgcagcagctttctggtggacagaaa
tcattagtggctctcgccttgatttttgcaatccagaaatgtgatcctgctccgttttac
ctatttgatgaaattgaccaagccttggatgcccagcacagaaaggctgtttcagatatg
atcatggaattagcagaacatgctcaattcattaccacaactttcagaccagaactgctt
gaatctgctgataaattctatggtgtaaaattcagaaataaggtaagccatattgatgtg
atcactgcagagatggccaaagactttgtggaagatgatactactcatggctaa
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