Crotalus tigris (Tiger rattlesnake): 120313410
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Entry
120313410 CDS
T08476
Name
(RefSeq) BRCA1-associated RING domain protein 1-like isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ctig
Crotalus tigris (Tiger rattlesnake)
Pathway
ctig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ctig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120313410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ctig03019
]
120313410
04121 Ubiquitin system [BR:
ctig04121
]
120313410
03036 Chromosome and associated proteins [BR:
ctig03036
]
120313410
03400 DNA repair and recombination proteins [BR:
ctig03400
]
120313410
Messenger RNA biogenesis [BR:
ctig03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120313410
Ubiquitin system [BR:
ctig04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120313410
Chromosome and associated proteins [BR:
ctig03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120313410
DNA repair and recombination proteins [BR:
ctig03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120313410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_4
Ank_3
Ank_5
BRCT
BRCT_2
ANK_LRRK2
zf-RING_5
zf-RING_10
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
NIBRIN_BRCT_II
zf-RING_UBOX
Prok-RING_4
Ank_KRIT1
RTT107_BRCT_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
120313410
NCBI-ProteinID:
XP_039211252
LinkDB
All DBs
Position
Unknown
AA seq
764 aa
AA seq
DB search
MAQEQHPQSGTPWKETRLALRRLAECLKCSLCTNILKKPVNLGSCEHVFCLSCVGNCIGI
ACPICQVPTMKQDVKINRKLDIIIKLYSKLQTLQDKDFSDPEDNVFTLGQKVGEAAAKKK
QIKMSFSPRSRRMKFTLKTSPKKSELLKQSVTDSRSCNLTSIYDFISSPPHEKTFRQEKT
PEQEYKKELRKKTLTNFSQQGDTFRGQQENSSESYKVGLSESKDPIPSYGSKNTSKLRLK
NRKELAENAGKLSTSNGKPVKPKEKSKNCNFSLVPNVGGDLTSEEWLSLAKETTPLKCDR
QFAGSPISLPKCHKTKEETIHQRSRLLKKASEQFSGNSVAAFPFRDYAVSSPSLPSPGIT
SLLRNLEDFAWASDPELPKVSRNCAERQVFLKKFPKNLSAKRNHKGESLLHTASIEGNLS
AVECLLKKGADPNIKDYAGWTPLHEACNHGHKQIVELLIRHGALLNVTGYQNDMPLHDAA
RNGHIEIVELLLLHGASRDVVNMFGHKPVDYAETEEMKLLLMQPGKNDSSSVMQYAECTN
LNYCKKGPVVLLGSGLDPGQQLLLSKLATVMKVRICTEFNSSVTHVVIPAYPVRTTMKCM
LALLSGCWILTFMWVEASLRSGTFEQEEKYEIDGGPRQGRLNTEQLLPKLFDGCYFYFLG
IFKEHKKDDLKELVKSGGGQILLRKPKSDNDVTQTINTVAYHAEITSDQSFCTQYIIYDA
SSNYKPQKVHQGKVWEVPSRWLIDCVMSFQLLPVKNVFPSIVIT
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagagcagcacccgcagtccggaaccccgtggaaagaaacgcggctggctttg
agacggttggccgagtgcctgaagtgctctctttgcactaacattctgaagaaacctgtg
aacctaggaagttgtgaacatgtcttctgtctaagttgtgtaggcaactgtattggcata
gcttgcccaatatgtcaggtgccaaccatgaaacaggatgtgaaaataaacaggaaacta
gacatcatcatcaaactctatagcaaactgcaaactctgcaggacaaggacttctcagat
cctgaagataatgtgtttactttgggacagaaagttggagaagcagcagctaaaaagaaa
caaatcaaaatgagtttcagtcctcgcagtaggaggatgaaattcaccctgaagacaagc
ccaaagaaatcagagctgctgaagcaatcagttacagacagccggtcttgtaacttaacc
tccatctatgactttatttcttcacctcctcatgagaagactttcagacaggaaaagaca
cctgagcaagaatataagaaagaactaagaaaaaagactttaacaaacttcagccaacag
ggggacaccttcaggggccaacaggaaaactccagtgaaagctataaagtaggcctaagt
gaaagcaaagatccaatccccagttatggctcaaaaaatacctcaaaactgaggctgaaa
aacaggaaagagcttgcagagaatgcaggtaaactctcaacaagcaatggtaaacctgtg
aaacctaaagaaaagagtaaaaattgcaatttttctctcgtgcctaacgttgggggagat
ctgacttctgaagagtggctttccttggcaaaggaaacaactccgttaaagtgtgacagg
cagtttgctggctctcccatttctttgcctaagtgtcataaaacaaaagaggagactatc
caccaaaggtcacgattactgaaaaaggcctcagagcagttttccgggaattctgtggca
gcctttccctttagggattatgcagtttcttccccatctctgccatcgcctggaatcaca
tcactcctaaggaacctggaagactttgcttgggccagtgacccagaacttccaaaagtg
tccagaaattgtgctgaaaggcaggttttcctcaagaaatttcccaaaaacttatcagcc
aagagaaaccataaaggggagtctctactccatactgcttctattgagggtaatctttct
gctgttgaatgcttgttgaaaaaaggagctgatcccaacattaaagattatgccggttgg
acaccactgcatgaagcctgtaatcatggacataagcagatagttgaattactgataaga
catggggcactgctgaatgtgactgggtatcagaatgatatgccacttcacgatgctgcc
aggaatggacatatagaaattgtggagctgctgcttttgcatggagcttctcgagatgtg
gttaatatgtttggtcacaaacctgtggattatgctgaaacagaagagatgaaattgctt
ctcatgcaaccaggaaagaatgattcttcttcagttatgcaatatgcagaatgcacaaac
ctaaattactgtaaaaaaggacctgttgttctccttgggagtggtcttgatccaggtcaa
cagctgctgttaagcaaattggccacagttatgaaggttagaatatgtacagaatttaac
agttccgtgacacatgtcgttattcctgcatatcctgtgcgaactactatgaaatgcatg
ttggcacttttatctggatgttggatcttgacatttatgtgggtagaagccagcttgagg
agtggcacttttgaacaagaagagaaatatgaaatagatggtggtcctcgacaaggccgc
ctgaacacagaacagcttttgcctaaactttttgatggctgctacttctatttcctggga
atatttaaagaacacaagaaagatgacctcaaagaactggtgaaatctggagggggacag
attctcctaaggaagcctaaatcagataacgatgtgactcagacaatcaatacagtagcc
tatcatgctgagattacttcggaccagagtttctgtacacaatatataatctatgatgcc
tcttctaactacaaaccacaaaaagttcatcaaggaaaagtttgggaagtaccctccagg
tggcttattgactgtgtgatgtcatttcaactgttgcctgttaaaaatgtttttcctagc
attgtgataacataa
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